Coated vesicles in plant cells

Seminars in Cell and Developmental Biology

Volumn 18, Issue 4, 2007, Pages 471-478

  Paul, Matthew J ^a   Frigerio, Lorenzo ^a  

^a UNIVERSITY OF WARWICK   (United Kingdom)

Author keywords

Clathrin; Coated vesicles; COPI; COPII; Endocytosis; Endoplasmic reticulum; Golgi; Plant secretory pathway; Protein trafficking; Retromer; Vacuole

Indexed keywords

CLATHRIN; COAT PROTEIN COMPLEX I; COAT PROTEIN COMPLEX II; GUANINE NUCLEOTIDE BINDING PROTEIN;

ARABIDOPSIS; COATED VESICLE; ENDOPLASMIC RETICULUM; GENOME; GOLGI COMPLEX; MEMBRANE TRANSPORT; NONHUMAN; PLANT; PLANT CELL; PROTEIN SECRETION; REVIEW;

ARABIDOPSIS; EUKARYOTA; MAMMALIA;

EID: 34548429764     PISSN: 10849521     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.semcdb.2007.07.005     Document Type: Review

References (104)

1. Galili G., Sengupta-Gopalan C., and Ceriotti A. The endoplasmic reticulum of plant cells and its role in protein maturation and biogenesis of oilbodies. Plant Mol Biol 38 (1998) 1-29
2. Vitale A., and Denecke J. The endoplasmic reticulum-gateway of the secretory pathway. Plant Cell 11 (1999) 615-628
3. Vitale A., and Galili G. The endomembrane system and the problem of protein sorting. Plant Physiol 125 (2001) 115-118
4. Hawes C. Cell biology of the plant Golgi apparatus. New Phytol 165 (2005) 29-44
5. Martinez-Menarguez J.A., Geuze H.J., Slot J.W., and Klumperman J. Vesicular tubular clusters between the ER and Golgi mediate concentration of soluble secretory proteins by exclusion from COPI-coated vesicles. Cell 98 (1999) 81-90
6. DaSilva L.L., Snapp E.L., Denecke J., Lippincott-Schwartz J., Hawes C., and Brandizzi F. Endoplasmic reticulum export sites and Golgi bodies behave as single mobile secretory units in plant cells. Plant Cell 16 (2004) 1753-1771
7. Yang Y.D., Elamawi R., Bubeck J., Pepperkok R., Ritzenthaler C., and Robinson D.G. Dynamics of COPII vesicles and the Golgi apparatus in cultured nicotiana tabacum BY-2 cells provides evidence for transient association of Golgi stacks with endoplasmic reticulum exit sites. Plant Cell 17 (2005) 1513-1531
8. Matheson L.A., Hanton S.L., and Brandizzi F. Traffic between the plant endoplasmic reticulum and Golgi apparatus: to the Golgi and beyond. Curr Opin Plant Biol 9 (2006) 601-609
9. Phillipson B.A., Pimpl P., daSilva L.L., Crofts A.J., Taylor J.P., Movafeghi A., et al. Secretory bulk flow of soluble proteins is efficient and COPII dependent. Plant Cell 13 (2001) 2005-2020
10. Mo B., Tse Y.C., and Jiang L. Plant prevacuolar/endosomal compartments. Int Rev Cytol 253 (2006) 95-129
11. Dhonukshe P., Aniento F., Hwang I., Robinson D.G., Mravec J., Stierhof Y.D., et al. Clathrin-mediated constitutive endocytosis of PIN auxin efflux carriers in Arabidopsis. Curr Biol 17 (2007) 520-527
12. Donohoe B.S., Kang B.H., and Staehelin L.A. Identification and characterization of COPIa- and COPIb-type vesicle classes associated with plant and algal Golgi. Proc Natl Acad Sci USA 104 (2007) 163-168
13. Blackbourn H.D., and Jackson A.P. Plant clathrin heavy chain: sequence analysis and restricted localisation in growing pollen tubes. J Cell Sci 109 Pt 4 (1996) 777-786
14. Robinson D.G., and Hillmer S. Endocytosis in plants. Physiol Plant 79 (1990) 96-104
15. Payne G.S., and Schekman R. A test of clathrin function in protein secretion and cell growth. Science 230 (1985) 1009-1014
16. Pearse B.M., and Robinson M.S. Clathrin, adaptors, and sorting. Annu Rev Cell Biol 6 (1990) 151-171
17. Robinson D.G., Oliviusson P., and Hinz G. Protein sorting to the storage vacuoles of plants: a critical appraisal. Traffic 6 (2005) 615-625
18. Vitale A., and Hinz G. Sorting of proteins to storage vacuoles: how many mechanisms?. Trends Plant Sci 10 (2005) 316-323
19. Vitale A., and Raikhel N.V. What do proteins need to reach different vacuoles?. Trends Plant Sci 4 (1999) 149-155
20. Hohl I., Robinson D.G., Chrispeels M.J., and Hinz G. Transport of storage proteins to the vacuole is mediated by vesicles without a clathrin coat. J Cell Sci 109 (1996) 2539-2550
21. Robinson D.G., Hinz G., and Holstein S.E. The molecular characterization of transport vesicles. Plant Mol Biol 38 (1998) 49-76
22. Otegui M.S., Herder R., Schulze J., Jung R., and Staehelin L.A. The proteolytic processing of seed storage proteins in Arabidopsis embryo cells starts in the multivesicular bodies. Plant Cell 18 (2006) 2567-2581
23. Oliviusson P., Heinzerling O., Hillmer S., Hinz G., Tse Y.C., Jiang L., et al. Plant retromer, localized to the prevacuolar compartment and microvesicles in Arabidopsis, may interact with vacuolar sorting receptors. Plant Cell 18 (2006) 1239-1252
24. Seaman M.N., McCaffery J.M., and Emr S.D. A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast. J Cell Biol 142 (1998) 665-681
25. Horazdovsky B.F., Davies B.A., Seaman M.N., McLaughlin S.A., Yoon S., and Emr S.D. A sorting nexin-1 homologue, Vps5p, forms a complex with Vps17p and is required for recycling the vacuolar protein-sorting receptor. Mol Biol Cell 8 (1997) 1529-1541
26. Shimada T., Koumoto Y., Li L., Yamazaki M., Kondo M., Nishimura M., et al. AtVPS29, a putative component of a retromer complex, is required for the efficient sorting of seed storage proteins. Plant Cell Physiol 47 (2006) 1187-1194
27. Molendijk A.J., Ruperti B., and Palme K. Small GTPases in vesicle trafficking. Curr Opin Plant Biol 7 (2004) 694-700
28. Memon A.R. The role of ADP-ribosylation factor and SAR1 in vesicular trafficking in plants. Biochim Biophys Acta 1664 (2004) 9-30
29. Pimpl P., Hanton S.L., Taylor J.P., daSilva L.L., and Denecke J. The GTPase ARF1p controls the sequence-specific vacuolar sorting route to the lytic vacuole. Plant Cell 15 (2003) 1242-1256
30. Vernoud V., Horton A.C., Yang Z., and Nielsen E. Analysis of the small GTPase gene superfamily of Arabidopsis. Plant Physiol 131 (2003) 1191-1208
31. Moss J., and Vaughan M. Molecules in the ARF orbit. J Biol Chem 273 (1998) 21431-21434
32. Stefano G., Renna L., Chatre L., Hanton S.L., Moreau P., Hawes C., et al. In tobacco leaf epidermal cells, the integrity of protein export from the endoplasmic reticulum and of ER export sites depends on active COPI machinery. Plant J 46 (2006) 95-110
33. Xu J., and Scheres B. Dissection of Arabidopsis ADP-RIBOSYLATION FACTOR 1 function in epidermal cell polarity. Plant Cell 17 (2005) 525-536
34. Nie Z., and Randazzo P.A. Arf GAPs and membrane traffic. J Cell Sci 119 (2006) 1203-1211
35. Min M.K., Kim S.J., Miao Y., Shin J., Jiang L., and Hwang I. Overexpression of Arabidopsis AGD7 causes relocation of Golgi-localized proteins to the endoplasmic reticulum and inhibits protein trafficking in plant cells. Plant Physiol 143 (2007) 1601-1614
36. Zhuang X., Jiang J., Li J., Ma Q., Xu Y., Xue Y., et al. Over-expression of OsAGAP, an ARF-GAP, interferes with auxin influx, vesicle trafficking and root development. Plant J 48 (2006) 581-591
37. Geldner N., Anders N., Wolters H., Keicher J., Kornberger W., Muller P., et al. The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth. Cell 112 (2003) 219-230
38. Roth T.F., and Porter K.R. Yolk protein uptake in the oocyte of the mosquito Aedes Aegypti. L. J Cell Biol 20 (1964) 313-332
39. Pearse B.M. Clathrin: a unique protein associated with intracellular transfer of membrane by coated vesicles. Proc Natl Acad Sci USA 73 (1976) 1255-1259
40. Liu S.-H., Wong M.L., Craik C.S., and Brodsky F.M. Regulation of clathrin assembly and trimerization defined using recombinant triskelion hubs. Cell 83 (1995) 257-267
41. Fotin A., Kirchhausen T., Grigorieff N., Harrison S.C., Walz T., and Cheng Y. Structure determination of clathrin coats to subnanometer resolution by single particle cryo-electron microscopy. J Struct Biol 156 (2006) 453-460
42. Nathke I.S., Heuser J., Lupas A., Stock J., Turck C.W., and Brodsky F.M. Folding and trimerization of clathrin subunits at the triskelion hub. Cell 68 (1992) 899-910
43. Scheele U., and Holstein S.E.H. Functional evidence for the identification of an Arabidopsis clathrin light chain polypeptide. FEBS Lett 514 (2002) 355-360
44. Schmid M., Davison T.S., Henz S.R., Pape U.J., Demar M., Vingron M., et al. A gene expression map of Arabidopsis thaliana development. Nat Genet 37 (2005) 501-506
45. Liu S.H., Marks M.S., and Brodsky F.M. A dominant-negative clathrin mutant differentially affects trafficking of molecules with distinct sorting motifs in the class II major histocompatibility complex (MHC) pathway. J Cell Biol 140 (1998) 1023-1037
46. Stamnes M.A., and Rothman J.E. The binding of AP-1 clathrin adaptor particles to Golgi membranes requires ADP-ribosylation factor, a small GTP-binding protein. Cell 73 (1993) 999-1005
47. Gaidarov I., Chen Q., Falck J.R., Reddy K.K., and Keen J.H. A functional phosphatidylinositol 3,4,5-trisphosphate/phosphoinositide binding domain in the clathrin adaptor AP-2 alpha subunit. Implications for the endocytic pathway. J Biol Chem 271 (1996) 20922-20929
48. Wang Y.J., Wang J., Sun H.Q., Martinez M., Sun Y.X., Macia E., et al. Phosphatidylinositol 4 phosphate regulates targeting of clathrin adaptor AP-1 complexes to the Golgi. Cell 114 (2003) 299-310
49. Boehm M., and Bonifacino J.S. Adaptins: the final recount. Mol Biol Cell 12 (2001) 2907-2920
50. Holstein S.E., Drucker M., and Robinson D.G. Identification of a beta-type adaptin in plant clathrin-coated vesicles. J Cell Sci 107 Pt 4 (1994) 945-953
51. Happel N., Honing S., Neuhaus J.M., Paris N., Robinson D.G., and Holstein S.E. Arabidopsis mu A-adaptin interacts with the tyrosine motif of the vacuolar sorting receptor VSR-PS1. Plant J 37 (2004) 678-693
52. Maldonado-Mendoza I.E., and Nessler C.L. Cloning and expression of a plant homologue of the small subunit of the Golgi-associated clathrin assembly protein AP19 from Camptotheca acuminata. Plant Mol Biol 32 (1996) 1149-1153
53. Maldonado-Mendoza I.E., and Nessler C.L. Molecular characterization of the AP19 gene family in Arabidopsis thaliana: components of the Golgi AP-1 clathrin assembly protein complex. Plant Mol Biol 35 (1997) 865-872
54. Roca R., Stiefel V., and Puigdomenech P. Characterization of the sequence coding for the clathrin coat assembly protein AP17 (sigma2) associated with the plasma membrane from Zea mays and constitutive expression of its gene. Gene 208 (1998) 67-72
55. Barois N., and Bakke O. The adaptor protein AP-4 as a component of the clathrin coat machinery: a morphological study. Biochem J 385 (2005) 503-510
56. Robinson M.S. Adaptable adaptors for coated vesicles. Trends Cell Biol 14 (2004) 167-174
57. Westergren T., Dove S.K., Sommarin M., and Pical C. AtPIP5K1, an Arabidopsis thaliana phosphatidylinositol phosphate kinase, synthesizes PtdIns(3,4)P(2) and PtdIns(4,5)P(2) in vitro and is inhibited by phosphorylation. Biochem J 359 (2001) 583-589
58. Bonifacino J.S., and Traub L.M. Signals for sorting of transmembrane proteins to endosomes and lysosomes. Annu Rev Biochem 72 (2003) 395-447
59. Holstein S.E. Clathrin and plant endocytosis. Traffic 3 (2002) 614-620
60. Metzler M., Li B., Gan L., Georgiou J., Gutekunst C.A., Wang Y., et al. Disruption of the endocytic protein HIP1 results in neurological deficits and decreased AMPA receptor trafficking. EMBO J 22 (2003) 3254-3266
61. Shih S.C., Katzmann D.J., Schnell J.D., Sutanto M., Emr S.D., and Hicke L. Epsins and Vps27p/Hrs contain ubiquitin-binding domains that function in receptor endocytosis. Nat Cell Biol 4 (2002) 389-393
62. Nonet M.L., Holgado A.M., Brewer F., Serpe C.J., Norbeck B.A., Holleran J., et al. UNC-11, a Caenorhabditis elegans AP180 homologue, regulates the size and protein composition of synaptic vesicles. Mol Biol Cell 10 (1999) 2343-2360
63. Chidambaram S., Mullers N., Wiederhold K., Haucke V., and von Mollard G.F. Specific interaction between SNAREs and epsin N-terminal homology (ENTH) domains of epsin-related proteins in trans-Golgi network to endosome transport. J Biol Chem 279 (2004) 4175-4179
64. Holstein S.E., and Oliviusson P. Sequence analysis of Arabidopsis thaliana E/ANTH-domain-containing proteins: membrane tethers of the clathrin-dependent vesicle budding machinery. Protoplasma 226 (2005) 13-21
65. Barth M., and Holstein S.E. Identification and functional characterization of Arabidopsis AP180, a binding partner of plant alphaC-adaptin. J Cell Sci 117 (2004) 2051-2062
66. Lee G.J., Kim H., Kang H., Jang M., Lee D.W., Lee S., et al. EpsinR2 interacts with clathrin, adaptor protein-3, AtVTI12, and phosphatidylinositol-3-phosphate. implications for EpsinR2 function in protein trafficking in plant cells. Plant Physiol 143 (2007) 1561-1575
67. Song J., Lee M.H., Lee G.-J., Yoo C.M., and Hwang I. Arabidopsis EPSIN1 plays an important role in vacuolar trafficking of soluble cargo proteins in plant cells via interactions with clathrin, AP-1, VTI11, and VSR1. Plant Cell 18 (2006) 2258-2274
68. Ye W., and Lafer E.M. Bacterially expressed F1-20/AP-3 assembles clathrin into cages with a narrow size distribution: implications for the regulation of quantal size during neurotransmission. J Neurosci Res 41 (1995) 15-26
69. Odorizzi G., Cowles C.R., and Emr S.D. The AP-3 complex: a coat of many colours. Trends Cell Biol 8 (1998) 282-288
70. Stepp J.D., Huang K., and Lemmon S.K. The yeast adaptor protein complex, AP-3, is essential for the efficient delivery of alkaline phosphatase by the alternate pathway to the vacuole. J Cell Biol 139 (1997) 1761-1774
71. DaSilva L.L., Taylor J.P., Hadlington J.L., Hanton S.L., Snowden C.J., Fox S.J., et al. Receptor salvage from the prevacuolar compartment is essential for efficient vacuolar protein targeting. Plant Cell 17 (2005) 132-148
72. Matsuoka K., Bassham D.C., Raikhel N.V., and Nakamura K. Different sensitivity to wortmannin of two vacuolar sorting signals indicates the presence of distinct sorting machineries in tobacco cells. J Cell Biol 130 (1995) 1307-1318
73. Dhonukshe P., Baluska F., Schlicht M., Hlavacka A., Samaj J., Friml J., et al. Endocytosis of cell surface material mediates cell plate formation during plant cytokinesis. Dev Cell 10 (2006) 137-150
74. Sato K., and Nakano A. Mechanisms of COPII vesicle formation and protein sorting. FEBS Lett 581 (2007) 2076-2082
75. d'Enfert C., Gensse M., and Gaillardin C. Fission yeast and a plant have functional homologues of the Sar 1 and Sec 12 proteins involved in ER to Golgi traffic in budding yeast. EMBO J 11 (1992) 4205-4211
76. Movafeghi A., Happel N., Pimpl P., Tai G.H., and Robinson D.G. Arabidopsis Sec21p and Sec23p homologs. Probable coat proteins of plant COP-coated vesicles. Plant Physiol 119 (1999) 1437-1446
77. Lee M.H., Lee S.H., Kim H., Jin J.B., Kim D.H., and Hwang I. A WD40 repeat protein, Arabidopsis Sec13 homolog 1, may play a role in vacuolar trafficking by controlling the membrane association of AtDRP2A. Mol Cells 22 (2006) 210-219
78. Connerly P.L., Esaki M., Montegna E.A., Strongin D.E., Levi S., Soderholm J., et al. Sec16 is a determinant of transitional ER organization. Curr Biol 15 (2005) 1439-1447
79. Watson P., Townley A.K., Koka P., Palmer K.J., and Stephens D.J. Sec16 defines endoplasmic reticulum exit sites and is required for secretory cargo export in mammalian cells. Traffic 7 (2006) 1678-1687
80. Hanton S.L., Chatre L., Renna L., Matheson L.A., and Brandizzi F. De novo formation of plant endoplasmic reticulum export sites is membrane cargo induced and signal mediated. Plant Physiol 143 (2007) 1640-1650
81. Hanton S.L., Renna L., Bortolotti L.E., Chatre L., Stefano G., and Brandizzi F. Diacidic motifs influence the export of transmembrane proteins from the endoplasmic reticulum in plant cells. Plant Cell 17 (2005) 3081-3093
82. Crofts A.J., Leborgne-Castel N., Hillmer S., Robinson D.G., Phillipson B., Carlsson L.E., et al. Saturation of the endoplasmic reticulum retention machinery reveals anterograde bulk flow. Plant Cell 11 (1999) 2233-2247
83. Fiedler K., Veit M., Stamnes M.A., and Rothman J.E. Bimodal interaction of coatomer with the p24 family of putative cargo receptors. Science 273 (1996) 1396-1399
84. Dominguez M., Dejgaard K., Fullekrug J., Dahan S., Fazel A., Paccaud J.P., et al. gp25L/emp24/p24 protein family members of the cis-Golgi network bind both COP I and II coatomer. J Cell Biol 140 (1998) 751-765
85. Contreras I., Ortiz-Zapater E., and Aniento F. Sorting signals in the cytosolic tail of membrane proteins involved in the interaction with plant ARF1 and coatomer. Plant J 38 (2004) 685-698
86. Contreras I., Yang Y., Robinson D.G., and Aniento F. Sorting signals in the cytosolic tail of plant p24 proteins involved in the interaction with the COPII coat. Plant Cell Physiol 45 (2004) 1779-1786
87. Lee M.C., Miller E.A., Goldberg J., Orci L., and Schekman R. Bi-directional protein transport between the ER and Golgi. Annu Rev Cell Dev Biol 20 (2004) 87-123
88. Pimpl P., Movafeghi A., Coughlan S., Denecke J., Hillmer S., and Robinson D.G. In situ localization and in vitro induction of plant COPI-coated vesicles. Plant Cell 12 (2000) 2219-2235
89. Contreras I., Ortiz-Zapater E., Castilho L.M., and Aniento F. Characterization of Cop I coat proteins in plant cells. Biochem Biophys Res Commun 273 (2000) 176-182
90. Fullekrug J., Suganuma T., Tang B.L., Hong W., Storrie B., and Nilsson T. Localization and recycling of gp27 (hp24gamma3): complex formation with other p24 family members. Mol Biol Cell 10 (1999) 1939-1955
91. Marzioch M., Henthorn D.C., Herrmann J.M., Wilson R., Thomas D.Y., Bergeron J.J., et al. Erp1p and Erp2p, partners for Emp24p and Erv25p in a yeast p24 complex. Mol Biol Cell 10 (1999) 1923-1938
92. Muniz M., Nuoffer C., Hauri H.P., and Riezman H. The Emp24 complex recruits a specific cargo molecule into endoplasmic reticulum-derived vesicles. J Cell Biol 148 (2000) 925-930
93. Majoul I., Sohn K., Wieland F.T., Pepperkok R., Pizza M., Hillemann J., et al. KDEL receptor (Erd2p)-mediated retrograde transport of the cholera toxin A subunit from the Golgi involves COPI, p23, and the COOH terminus of Erd2p. J Cell Biol 143 (1998) 601-612
94. Arighi C.N., Hartnell L.M., Aguilar R.C., Haft C.R., and Bonifacino J.S. Role of the mammalian retromer in sorting of the cation-independent mannose 6-phosphate receptor. J Cell Biol 165 (2004) 123-133
95. Seaman M.S., Peyerl F.W., Jackson S.S., Lifton M.A., Gorgone D.A., Schmitz J.E., et al. Subsets of memory cytotoxic T lymphocytes elicited by vaccination influence the efficiency of secondary expansion in vivo. J Virol 78 (2004) 206-215
96. Seaman M.S., Santra S., Newberg M.H., Philippon V., Manson K., Xu L., et al. Vaccine-elicited memory cytotoxic T lymphocytes contribute to Mamu-A*01-associated control of simian/human immunodeficiency virus 89.6P replication in rhesus monkeys. J Virol 79 (2005) 4580-4588
97. Reddy J.V., and Seaman M.N. Vps26p, a component of retromer, directs the interactions of Vps35p in endosome-to-Golgi retrieval. Mol Biol Cell 12 (2001) 3242-3256
98. Seaman M.N., and Williams H.P. Identification of the functional domains of yeast sorting nexins Vps5p and Vps17p. Mol Biol Cell 13 (2002) 2826-2840
99. Yu J.W., and Lemmon M.A. All phox homology (PX) domains from Saccharomyces cerevisiae specifically recognize phosphatidylinositol 3-phosphate. J Biol Chem 276 (2001) 44179-44184
100. Paris N., and Neuhaus J.M. BP-80 as a vacuolar sorting receptor. Plant Mol Biol 50 (2002) 903-914
101. Griffin C.T., Trejo J., and Magnuson T. Genetic evidence for a mammalian retromer complex containing sorting nexins 1 and 2. Proc Natl Acad Sci USA 102 (2005) 15173-15177
102. Wassmer T., Attar N., Bujny M.V., Oakley J., Traer C.J., and Cullen P.J. A loss-of-function screen reveals SNX5 and SNX6 as potential components of the mammalian retromer. J Cell Sci 120 (2007) 45-54
103. Surpin M., and Raikhel N. Traffic jams affect plant development and signal transduction. Nat Rev Mol Cell Biol 5 (2004) 100-109
104. Johansen J.N., Vernhettes S., and Hofte H. The ins and outs of plant cell walls. Curr Opin Plant Biol 9 (2006) 616