-
1
-
-
0142135856
-
Determination of N-glycosylation sites and site heterogeneity in glycoproteins
-
An,H.J. et al. (2003) Determination of N-glycosylation sites and site heterogeneity in glycoproteins. Anal. Chem., 75, 5628-5637.
-
(2003)
Anal. Chem
, vol.75
, pp. 5628-5637
-
-
An, H.J.1
-
2
-
-
9144232912
-
UniProt: The universal protein knowledgebase
-
Apweiler,R. et al. (2004) UniProt: The universal protein knowledgebase. Nucleic Acids Res., 32, D115-D119.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Apweiler, R.1
-
3
-
-
3242892058
-
GPCRpred: An SVM-based method for prediction of families and subfamilies of G-protein coupled receptors
-
Bhasin,M. and Raghava,G.P.S. (2004) GPCRpred: An SVM-based method for prediction of families and subfamilies of G-protein coupled receptors. Nucleic Acids Res., 32, W383-W389.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Bhasin, M.1
Raghava, G.P.S.2
-
4
-
-
0035023445
-
Predicting protein-protein interactions from primary structure
-
Bock,H.J. and Gough,D.A. (2001) Predicting protein-protein interactions from primary structure. Bioinformatics, 17, 455-460.
-
(2001)
Bioinformatics
, vol.17
, pp. 455-460
-
-
Bock, H.J.1
Gough, D.A.2
-
5
-
-
10044235999
-
LIBSVM: A library for support vector machines
-
available at
-
Chang,C.-C. and Lin,C.-J. (2001) LIBSVM: A library for support vector machines. Software available at http://www.csie-ntu.edu.tw/cjlin/ libsvm
-
(2001)
Software
-
-
Chang, C.-C.1
Lin, C.-J.2
-
6
-
-
17844369895
-
Generalized fragment-substructure based property prediction method
-
Clark,M. (2005) Generalized fragment-substructure based property prediction method. J. Chem. Inf. Model., 45, 30-38.
-
(2005)
J. Chem. Inf. Model
, vol.45
, pp. 30-38
-
-
Clark, M.1
-
8
-
-
0002178053
-
Bias reduction of maximum likelihood estimates
-
Firth,D. (1993) Bias reduction of maximum likelihood estimates. Biometrika, 80, 27-38.
-
(1993)
Biometrika
, vol.80
, pp. 27-38
-
-
Firth, D.1
-
9
-
-
0142210290
-
Learning to predict protein-protein interactions
-
Gomez,S.M. et al. (2003) Learning to predict protein-protein interactions. Bioinformatics, 19, 1875-1881.
-
(2003)
Bioinformatics
, vol.19
, pp. 1875-1881
-
-
Gomez, S.M.1
-
11
-
-
0031552362
-
Development and validation for a genetic algorithm for flexible docking
-
Jones,G.P. et al. (1997) Development and validation for a genetic algorithm for flexible docking. J. Mol. Biol., 267, 727-748.
-
(1997)
J. Mol. Biol
, vol.267
, pp. 727-748
-
-
Jones, G.P.1
-
12
-
-
0037020329
-
Drug design strategies for targeting G protein-coupled receptors
-
Klabunde, T. and Hessler,G. (2002) Drug design strategies for targeting G protein-coupled receptors. Chem. Bio. Chem., 3, 928-944.
-
(2002)
Chem. Bio. Chem
, vol.3
, pp. 928-944
-
-
Klabunde, T.1
Hessler, G.2
-
13
-
-
3042798261
-
Molecular mechanisms of ligand binding, signaling and regulation within G-protein-coupled receptors: Molecular modeling and mutagenesis approaches to receptor structures and function
-
Kristiansen,K. (2004) Molecular mechanisms of ligand binding, signaling and regulation within G-protein-coupled receptors: Molecular modeling and mutagenesis approaches to receptor structures and function. Pharmacol. Ther., 103, 21-80.
-
(2004)
Pharmacol. Ther
, vol.103
, pp. 21-80
-
-
Kristiansen, K.1
-
14
-
-
1542714925
-
Mismatch string kernels for discriminative protein classification
-
Leslie,C.S. et al. (2004) Mismatch string kernels for discriminative protein classification. Bioinformatics, 20, 467-476.
-
(2004)
Bioinformatics
, vol.20
, pp. 467-476
-
-
Leslie, C.S.1
-
15
-
-
0742287001
-
Combining pairwise sequence similarity and support vector machines for detecting remote protein evolutionary and structural relationships
-
Liao,L. and Noble,S. (2003) Combining pairwise sequence similarity and support vector machines for detecting remote protein evolutionary and structural relationships. J. Comput. Biol., 10, 857-868.
-
(2003)
J. Comput. Biol
, vol.10
, pp. 857-868
-
-
Liao, L.1
Noble, S.2
-
16
-
-
13444262436
-
Predicting protein-protein interactions using signature products
-
Martin,S. et al. (2005) Predicting protein-protein interactions using signature products. Bioinformatics, 21, 218-226.
-
(2005)
Bioinformatics
, vol.21
, pp. 218-226
-
-
Martin, S.1
-
17
-
-
0038042482
-
Chemical substructures in drug discov
-
Merlot,C. et al. (2003) Chemical substructures in drug discov. Drug Discov. Today, 8, 594-602.
-
(2003)
Drug Discov. Today
, vol.8
, pp. 594-602
-
-
Merlot, C.1
-
18
-
-
11644261806
-
Automated docking using a lamarckian genetic algorithm and empirical binding free energy function
-
Morris,G.M. et al. (1998) Automated docking using a lamarckian genetic algorithm and empirical binding free energy function. J. Comput. Chem., 19, 1639-1662.
-
(1998)
J. Comput. Chem
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
-
19
-
-
24144495286
-
Identifying cooperative transcriptional regulations using protein-protein interactions
-
Nagamine,N. et al. (2005) Identifying cooperative transcriptional regulations using protein-protein interactions. Nucleic Acids Res. 33, 4828-4837.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4828-4837
-
-
Nagamine, N.1
-
20
-
-
0034604451
-
Crystal structure of rhodopsin: A G protein-coupled receptor
-
Palczewski,K. et al. (2000) Crystal structure of rhodopsin: A G protein-coupled receptor. Science, 289, 739-745.
-
(2000)
Science
, vol.289
, pp. 739-745
-
-
Palczewski, K.1
-
21
-
-
0003243224
-
Probabilistic outputs for support vector machines and comparison to regularized likelihood methods
-
Smola,A. et al, eds, MIT Press, Cambridge, MA, pp
-
Platt,J. (2000) Probabilistic outputs for support vector machines and comparison to regularized likelihood methods. In Smola,A. et al. (eds) Advances in Large Margin Classifiers. MIT Press, Cambridge, MA, pp. 61-74.
-
(2000)
Advances in Large Margin Classifiers
, pp. 61-74
-
-
Platt, J.1
-
23
-
-
0026546876
-
The molecular mechanism of "ecstasy" [3,4-methylenedioxymethamphetamine, MDMA]: Serotonin transporters are targets for MDMA induced serotonin release
-
Rudnick,G. and Wall,S.C. (1992) The molecular mechanism of "ecstasy" [3,4-methylenedioxymethamphetamine, MDMA]: Serotonin transporters are targets for MDMA induced serotonin release. Proc. Natl Acad. Sci. USA 89, 1817-1821.
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 1817-1821
-
-
Rudnick, G.1
Wall, S.C.2
-
24
-
-
0033669189
-
A network of protein-protein interactions in yeast
-
Schwikowski,B. et al. (2000) A network of protein-protein interactions in yeast. Nat. Biotechnol., 18, 1257-1261.
-
(2000)
Nat. Biotechnol
, vol.18
, pp. 1257-1261
-
-
Schwikowski, B.1
-
25
-
-
84986518987
-
Molecular docking using shape descriptors
-
Shoichet,B.K. et al. (1992) Molecular docking using shape descriptors. J. Comput. Chem., 13; 380-397.
-
(1992)
J. Comput. Chem
, vol.13
, pp. 380-397
-
-
Shoichet, B.K.1
-
26
-
-
0037093109
-
Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry
-
Soga, T. et al. (2002) Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry. Anal. Chem., 74, 2233-2239.
-
(2002)
Anal. Chem
, vol.74
, pp. 2233-2239
-
-
Soga, T.1
-
27
-
-
0037380012
-
Hypothalamic-pituitary-thyroid axis and sympathetic nervous system involvement in the hyperthemia induced by 3,4-methylenedioxymethamphetamine (MDMA, Ecstasy)
-
Sprague,J.E. et al. (2003) Hypothalamic-pituitary-thyroid axis and sympathetic nervous system involvement in the hyperthemia induced by 3,4-methylenedioxymethamphetamine (MDMA, Ecstasy). J. Pharmacol. Exp. Ther., 305, 159-166.
-
(2003)
J. Pharmacol. Exp. Ther
, vol.305
, pp. 159-166
-
-
Sprague, J.E.1
-
28
-
-
26944486424
-
Kernels for small molecules and the prediction of mutagenicity, toxicity and anti-cancer activity
-
Swamidass,S.J. et al. (2005) Kernels for small molecules and the prediction of mutagenicity, toxicity and anti-cancer activity. Bioinformatics, 21, 359-368.
-
(2005)
Bioinformatics
, vol.21
, pp. 359-368
-
-
Swamidass, S.J.1
-
29
-
-
21444450507
-
A variational Bayesian mixture modelling framework for cluster analysis of gene-expression data
-
Teschendorff,A.E. et al. (2005) A variational Bayesian mixture modelling framework for cluster analysis of gene-expression data. Bioinformatics, 21, 3025-3033.
-
(2005)
Bioinformatics
, vol.21
, pp. 3025-3033
-
-
Teschendorff, A.E.1
-
31
-
-
0035789124
-
New quantitative descriptors of amino acids based on multidimensional scaling of a large number of physical-chemical properties
-
Venkatarajan,M.S. and Braun,W. (2001) New quantitative descriptors of amino acids based on multidimensional scaling of a large number of physical-chemical properties. J. Mol. Model., 7, 445-453.
-
(2001)
J. Mol. Model
, vol.7
, pp. 445-453
-
-
Venkatarajan, M.S.1
Braun, W.2
-
32
-
-
33644876210
-
DrugBank: A comprehensive resource for in silico drug discovery and exploration
-
Wishart, D.A. et al. (2006) DrugBank: A comprehensive resource for in silico drug discovery and exploration. Nucleic Acids Res., 34, D668-D672.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Wishart, D.A.1
-
33
-
-
33644889341
-
Using pseudo amino acid composition to predict protein structural classes: Approached with complexity measure factor
-
Xiao,X. et al. (2006) Using pseudo amino acid composition to predict protein structural classes: Approached with complexity measure factor. J. Comput. Chem., 27, 478-482.
-
(2006)
J. Comput. Chem
, vol.27
, pp. 478-482
-
-
Xiao, X.1
-
34
-
-
33746218840
-
Prediction of protein subcellular localization
-
Yu,C-S. et al. (2006) Prediction of protein subcellular localization. PROTEINS. Struct. Funct. Bioinform., 64, 643-651.
-
(2006)
PROTEINS. Struct. Funct. Bioinform
, vol.64
, pp. 643-651
-
-
Yu, C.-S.1
-
35
-
-
0344254815
-
Drug discovery using support vector machines. The case studies of drug-likeness, agrochemical-likeness, and enzyme inhibition predictions
-
Zernov,V.V. et al. (2003) Drug discovery using support vector machines. The case studies of drug-likeness, agrochemical-likeness, and enzyme inhibition predictions. J. Chem. Comput. Sci., 43, 2048-2056.
-
(2003)
J. Chem. Comput. Sci
, vol.43
, pp. 2048-2056
-
-
Zernov, V.V.1
|