Microarray detection of duplex and triplex DNA binders with DNA-modified gold nanoparticles

Analytical Chemistry

Volumn 79, Issue 15, 2007, Pages 6037-6041

  Lytton Jean, Abigail K R ^a   Min, Su Han ^a,b   Mirkin, Chad A ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

^b Chung Ang University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

DISCRIMINATORS; GENE EXPRESSION; GOLD; MICROARRAYS; NANOPARTICLES; ONCOLOGY; SCREENING;

ANTICANCER AGENTS; DRUG CANDIDATES; DRUG SCREENING; TRIPLEX DNA BINDERS;

DNA;

ANTINEOPLASTIC AGENT; DOUBLE STRANDED DNA; GOLD; NANOPARTICLE; OLIGONUCLEOTIDE; TOXIN; TRANSCRIPTION FACTOR;

ARTICLE; BINDING AFFINITY; GENE EXPRESSION REGULATION; HIGH THROUGHPUT SCREENING; MICROARRAY ANALYSIS; PROTEIN DNA BINDING; SCREENING; TECHNOLOGY;

BINDING SITES; DNA; GOLD; MOLECULAR PROBES; NANOPARTICLES; NUCLEIC ACID PROBES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SCATTERING, RADIATION; SENSITIVITY AND SPECIFICITY; TEMPERATURE;

EID: 34547738928     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac070635h     Document Type: Article

References (36)

1. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. Nature 1996, 382, 607-609.
2. Elghanian, R.; Storhoff, J. J.; Mucic, R. C.; Letsinger, R. L.; Mirkin, C. A. Science 1997, 277, 1078-1081.
3. Nam, J. M.; Stoeva, S. I.; Mirkin, C. A. J. Am. Chem. Soc. 2004, 126, 5932-5933.
4. Taton, T. A.; Mirkin, C. A.; Letsinger, R. L. Science 2000, 289, 1757-1760.
5. Sato, K.; Hosokawa, K.; Maeda, M. J. Am. Chem. Soc. 2003, 125, 8102-8103.
6. He, L.; Musick, M. D.; Nicewarner, S. R.; Salinas, F. G.; Stephen J. Benkovic; Natan, M. J.; Keating, C. D. J. Am. Chem. Soc. 2000, 122, 9071-9077.
7. Maxwell, D. J.; Taylor, J. R.; Nie, S. J. Am. Chem. Soc. 2002, 124, 9609-9612.
8. Su, M.; Li, S.; Dravid, V. P. Appl. Phys. Lett. 2003, 82, 3562-3564.
9. Niazov, T.; Pavlov, V.; Xiao, Y.; Gill, R.; Willner, I. Nano Lett. 2004, 4, 1683-1687.
10. Nam, J. M.; Thaxton, C. S.; Mirkin, C. A. Science 2003, 301, 1884-1886.
11. Stoeva, S. I.; Lee, J.-S.; Smith, J. E.; Rosen, S. T.; Mirkin, C. A. J. Am. Chem. Soc. 2006, 128, 8378-8379.
12. Rosi, N. L.; Mirkin, C. A. Chem. Rev. 2005, 105, 1547-1562.
13. Lytton-Jean, A. K. R.; Mirkin, C. A. J. Am. Chem. Soc. 2005, 127, 12754-12755.
14. Ihmels, H.; Otto, D. In Supermolecular Dye Chemistry; Würthner, F. et al.; Topics in Current Chemistry 258; Springer: Berlin, 2005; pp 161-204.
15. Strekowski, L.; Say, M.; Zegrocka, O.; Tanious, F. A.; Wilson, W. D.; Manzel, L.; Macfarlane, D. E. Bioorg. Med. Chem. 2003, 11, 1079-1085.
16. Han, M. S.; Lytton-Jean, A. K. R.; Oh, B.-K.; Heo, J.; Mirkin, C. A. Angew. Chem., Int. Ed. 2006, 45, 1807-1810.
17. Han, M. S.; Lytton-Jean, A. K. R.; Mirkin, C. A. J. Am. Chem. Soc. 2006, 128, 4954-4955.
18. Yang, X.-L.; Wang, A. H.-J. Pharm. Ther. 1999, 83, 181-215.
19. Praseuth, D.; Guieysse, A. L.; Hélène, C. Biochim. Biophys. Acta 1999, 1489, 181-206.
20. Haq, I.; Ladbury, J. J. Mol. Recognit. 2000, 13, 188-197.
21. Mergny, J. L.; Duval-Valentin, G.; Nguyen, C. H.; Perrouault, L.; Faucon, B.; Rougée, M.; Montenay-Garestier, T.; Bisagni, E.; Hélène, C. Science 1992, 256, 1681-1684.
22. Thompson, L. A.; Ellman, J. A. Chem. Rev. 1996, 96, 555-600.
23. Balkenhohl, F.; von dem Bussche-Hünnefeld, C.; Lansky, A.; Zechel, C. Angew. Chem., Int. Ed. 1996, 35, 2288-2337.
24. Johnston, P. A.; Johnston, P. A. Drug Discovery Today 2002, 7, 353-363.
25. Boger, D. L.; Desharnais, J.; Capps, K. Angew. Chem., Int. Ed. 2004, 42, 4138-4176.
26. Wang, S.; Sim, T. B.; Kim, Y. S.; Chang, Y.-T. Curr. Opin. Chem. Biol. 2004, 8, 371-377.
27. Silver, G. C.; Sun, J.-S.; Nguyen, C. H.; Boutorine, A. S.; Bisagni, E.; Helene, C. J. Am. Chem. Soc. 1997, 119, 263-268.
28. Rosu, F.; De Pauw, E.; Guittat, L.; Alberti, P.; Lacroix, L.; Mailliet, P.; Riou, J.-F.; Mergny, J.-L. Biochemistry 2003, 42, 10361-10371.
29. Chaires, J. B.; Ren, J.; Hamelberg, D.; Kumar, A.; Pandya, V.; Boykin, D. W.; Wilson, W. D. J. Med. Chem. 2004, 47, 5729-5742.
30. Boger, D. L.; Fink, B. E.; Brunette, S. R.; Tse, W. C.; Hedrick, M. P. J. Am. Chem. Soc. 2001, 123, 5878-5891.
31. Darby, R. A. J.; Sollogoub, M.; McKeen, C.; Brown, L.; Risitano, A.; Brown, N.; Barton, C.; Brown, T.; Fox, K. R. Nucleic Acids Res. 2002, 30, e39.
32. Antonini, I.; Polucci, P.; Jenkins, T. C.; Kelland, L. R.; Menta, E.; Pescalli, N.; Stefanska, B.; Mazerski, J.; Martelli, S. J. Med. Chem. 1997, 40, 3749-3755.
33. Willis, B.; Arya, D. P. Biochemistry 2006, 45, 10217-10232.
34. Freeman, R. G.; Hommer, M. B.; Grabar, K. C.; Jackson, M. A.; Natan, M. J. J. Phys. Chem. 1996, 100, 718-724.
35. Fox, K. R. Curr. Med. Chem. 2000, 7, 17-37.
36. Rougée, M.; Faucon, B.; Mergny, J. L.; Barcelo, F.; Giovannangeli, C.; Garestier, T.; Hélène, C. Biochemistry 1992, 31, 9269-9278.