-
1
-
-
0024373679
-
DNA conformation and protein binding
-
Travers, A.A. DNA conformation and protein binding. Annu. Rev. Biochem. 58, 427-452 (1989).
-
(1989)
Annu. Rev. Biochem
, vol.58
, pp. 427-452
-
-
Travers, A.A.1
-
2
-
-
0018689799
-
Molecular structure of a left-handed double helical DNA fragment at atomic resolution
-
Wang, A.H. et al. Molecular structure of a left-handed double helical DNA fragment at atomic resolution. Nature 282, 680-686 (1979).
-
(1979)
Nature
, vol.282
, pp. 680-686
-
-
Wang, A.H.1
-
4
-
-
0037803571
-
Timeline: Z-DNA: the long road to biological function
-
RTch, A. & Zhang, S. Timeline: Z-DNA: the long road to biological function. Nat. Rev. Genet. 4, 566-572 (2003).
-
(2003)
Nat. Rev. Genet
, vol.4
, pp. 566-572
-
-
RTch, A.1
Zhang, S.2
-
5
-
-
0035839132
-
Telomere dysfunction increases mutation rate and genomic instability
-
Hackett, J.A., Feldser, D.M. & Greider, C.W. Telomere dysfunction increases mutation rate and genomic instability. Cell 106, 275-286 (2001).
-
(2001)
Cell
, vol.106
, pp. 275-286
-
-
Hackett, J.A.1
Feldser, D.M.2
Greider, C.W.3
-
6
-
-
0345304903
-
DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA
-
Lei, M., Podell, E.R., Baumann, P. & Cech, T.R. DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA. Nature 426, 198-203 (2003).
-
(2003)
Nature
, vol.426
, pp. 198-203
-
-
Lei, M.1
Podell, E.R.2
Baumann, P.3
Cech, T.R.4
-
7
-
-
0036562687
-
Telomere maintenance as a target for anticancer drug discovery
-
Neidle, S. & Parkinson, G.N. Telomere maintenance as a target for anticancer drug discovery. Nat. Rev. Drug Discov. 1, 383-393 (2002).
-
(2002)
Nat. Rev. Drug Discov
, vol.1
, pp. 383-393
-
-
Neidle, S.1
Parkinson, G.N.2
-
8
-
-
0036519363
-
DNA and its associated processes as targets for cancer therapy
-
Hurley, L.H. DNA and its associated processes as targets for cancer therapy. Nat. Rev. Cancer 2, 188-200 (2002).
-
(2002)
Nat. Rev. Cancer
, vol.2
, pp. 188-200
-
-
Hurley, L.H.1
-
9
-
-
0037082423
-
Natural and pharmacological regulation of telomerase
-
Mergny, J.-L. et. al. Natural and pharmacological regulation of telomerase. Nucleic Acids Res. 30, 839-865 (2002).
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 839-865
-
-
Mergny, J.-L.1
et., al.2
-
10
-
-
0032828652
-
Inhibition of telomerase limits the growth of human cancer cells
-
Hahn, W.C. et al. Inhibition of telomerase limits the growth of human cancer cells. Nat. Med. 5, 1164-1170 (1999).
-
(1999)
Nat. Med
, vol.5
, pp. 1164-1170
-
-
Hahn, W.C.1
-
11
-
-
0025877846
-
Inhibition of telomerase by G-quartet DNA structures
-
Zahler, A.M., Williamson, J.R., Cech, T.R. & Prescott, D.M. Inhibition of telomerase by G-quartet DNA structures. Nature 350, 718-720 (1991).
-
(1991)
Nature
, vol.350
, pp. 718-720
-
-
Zahler, A.M.1
Williamson, J.R.2
Cech, T.R.3
Prescott, D.M.4
-
12
-
-
0035059660
-
Telomerase and cancer
-
Shay, J.W., Zou, Y., Hiyama, E. & Wright, W.E. Telomerase and cancer. Hum. Mol. Genet. 10, 677-685 (2001).
-
(2001)
Hum. Mol. Genet
, vol.10
, pp. 677-685
-
-
Shay, J.W.1
Zou, Y.2
Hiyama, E.3
Wright, W.E.4
-
13
-
-
0035838992
-
Regulation of CSF1 promoter by the SWI/SNF-like BAF complex
-
Liu, R. et al. Regulation of CSF1 promoter by the SWI/SNF-like BAF complex. Cell 106, 309-318 (2001).
-
(2001)
Cell
, vol.106
, pp. 309-318
-
-
Liu, R.1
-
14
-
-
0025731583
-
Structure and function of telomeres
-
Blackburn, E.H. Structure and function of telomeres. Nature 350 569-573 (1991).
-
(1991)
Nature
, vol.350
, pp. 569-573
-
-
Blackburn, E.H.1
-
15
-
-
0027483012
-
Co-crystal structure of TBP recognizing the minor groove of a TATA element
-
Kim, J.L., Nikolov, D.B. & Burley, S.K. Co-crystal structure of TBP recognizing the minor groove of a TATA element. Nature 365, 520-527 (1993).
-
(1993)
Nature
, vol.365
, pp. 520-527
-
-
Kim, J.L.1
Nikolov, D.B.2
Burley, S.K.3
-
16
-
-
0029995880
-
Crystal structure of a human TATA box-binding protein/TATA element complex
-
Nikolov, D.B. et al. Crystal structure of a human TATA box-binding protein/TATA element complex. Proc. Natl. Acad. Sci. USA 93, 4862-4867 (1996).
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 4862-4867
-
-
Nikolov, D.B.1
-
17
-
-
0027504913
-
Crystal structure of a yeast TBP/TATA-box complex
-
Kim, Y., Geiger, J.H., Hahn, S. & Sigler, P.B. Crystal structure of a yeast TBP/TATA-box complex. Nature 365, 512-520 (1993).
-
(1993)
Nature
, vol.365
, pp. 512-520
-
-
Kim, Y.1
Geiger, J.H.2
Hahn, S.3
Sigler, P.B.4
-
18
-
-
0028785254
-
The solution structure of the human ETS1-DNA complex reveals a novel mode of binding and true side chain intercalation
-
Werner, M.H. et al. The solution structure of the human ETS1-DNA complex reveals a novel mode of binding and true side chain intercalation. Cell 83, 761-771 (1995).
-
(1995)
Cell
, vol.83
, pp. 761-771
-
-
Werner, M.H.1
-
19
-
-
0028173030
-
Crystal structure of LacI member, PurR, bound to DNA: Minor groove binding by alpha helices
-
Schumacher, M.A., Choi, K.Y., Zalkin, H. & Brennan, R.G. Crystal structure of LacI member, PurR, bound to DNA: Minor groove binding by alpha helices. Science 266, 763-770 (1994).
-
(1994)
Science
, vol.266
, pp. 763-770
-
-
Schumacher, M.A.1
Choi, K.Y.2
Zalkin, H.3
Brennan, R.G.4
-
20
-
-
0029075461
-
Molecular basis of human 46X, Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex
-
Werner, M.H., Huth, J.R., Gronenborn, A.M. & Clore, G.M. Molecular basis of human 46X, Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex. Cell 81, 705-714 (1995).
-
(1995)
Cell
, vol.81
, pp. 705-714
-
-
Werner, M.H.1
Huth, J.R.2
Gronenborn, A.M.3
Clore, G.M.4
-
21
-
-
0018634454
-
A direct demonstration that the ethanol-induced transition of DNA is between the A and B forms: An X-ray diffraction study
-
Zimmerman, S.B. & Pheiffer, B.H. A direct demonstration that the ethanol-induced transition of DNA is between the A and B forms: An X-ray diffraction study. J. Mol. Biol. 135, 1023-1027 (1979).
-
(1979)
J. Mol. Biol
, vol.135
, pp. 1023-1027
-
-
Zimmerman, S.B.1
Pheiffer, B.H.2
-
22
-
-
0021101580
-
Proton nuclear Overhauser effect study of the structure of a deoxyoligonucleotide duplex in aqueous solution
-
Reid, D.G. Proton nuclear Overhauser effect study of the structure of a deoxyoligonucleotide duplex in aqueous solution. Biochemistry 22, 2019-2025 (1983).
-
(1983)
Biochemistry
, vol.22
, pp. 2019-2025
-
-
Reid, D.G.1
-
23
-
-
0022420294
-
Probing the three-dimensional structures of DNA and RNA oligonucleotides in solution by nuclear Overhauser enhancement measurements
-
Clore, G.M. & Gronenborn, A.M. Probing the three-dimensional structures of DNA and RNA oligonucleotides in solution by nuclear Overhauser enhancement measurements. FEBS Lett. 179, 187-198 (1985).
-
(1985)
FEBS Lett
, vol.179
, pp. 187-198
-
-
Clore, G.M.1
Gronenborn, A.M.2
-
24
-
-
33746190678
-
Photochemical approach to probing different DNA structure
-
Xu, Y. & Sugiyama, H. Photochemical approach to probing different DNA structure. Angew. Chem. Int. Ed. Engl. 45, 1354-1362 (2006).
-
(2006)
Angew. Chem. Int. Ed. Engl
, vol.45
, pp. 1354-1362
-
-
Xu, Y.1
Sugiyama, H.2
-
25
-
-
0025121387
-
Highly sequence-selective photoreaction of 5-bromouracil-containing deoxyhexanucleotides
-
Sugiyama, H., Tsutsumi, Y. & Saito, I. Highly sequence-selective photoreaction of 5-bromouracil-containing deoxyhexanucleotides. J. Am. Chem. Soc. 112, 6720-6721 (1990).
-
(1990)
J. Am. Chem. Soc
, vol.112
, pp. 6720-6721
-
-
Sugiyama, H.1
Tsutsumi, Y.2
Saito, I.3
-
26
-
-
0001338620
-
Photoinduced deoxyribose C2′ oxidation in DNA. Alkali-dependent cleavage of erythrose-containing sites via a retroaldol reaction
-
Sugiyama, H., Tsutsumi, Y., Fujimoto, K. & Saito, I. Photoinduced deoxyribose C2′ oxidation in DNA. Alkali-dependent cleavage of erythrose-containing sites via a retroaldol reaction. J. Am. Chem. Soc. 115, 4443-4447 (1993).
-
(1993)
J. Am. Chem. Soc
, vol.115
, pp. 4443-4447
-
-
Sugiyama, H.1
Tsutsumi, Y.2
Fujimoto, K.3
Saito, I.4
-
27
-
-
0029872489
-
Evidence for intrastrand C2′ hydrogen abstraction in photoirradiation of 5-halouracil-containing oligonucleotides by using stereospecifically C2′-deuterated deoxyadenosine
-
Sugiyama, H. et al. Evidence for intrastrand C2′ hydrogen abstraction in photoirradiation of 5-halouracil-containing oligonucleotides by using stereospecifically C2′-deuterated deoxyadenosine. Tetrahedr. Lett. 37, 1805-1808 (1996).
-
(1996)
Tetrahedr. Lett
, vol.37
, pp. 1805-1808
-
-
Sugiyama, H.1
-
28
-
-
0030784860
-
Preferential C1′ hydrogen abstraction by an uracilyl radical in a DNA-RNA hybrid
-
Sugiyama, H., Fujimoto, K. & Saito, I. Preferential C1′ hydrogen abstraction by an uracilyl radical in a DNA-RNA hybrid. Tetrahedr. Lett. 38, 8057-8060 (1997).
-
(1997)
Tetrahedr. Lett
, vol.38
, pp. 8057-8060
-
-
Sugiyama, H.1
Fujimoto, K.2
Saito, I.3
-
29
-
-
0033576988
-
Conformation-dependent photochemistry of 5-halouracil-containing DNA: Stereospecific 2′-hydroxylation of deoxyribose in Z-form DNA
-
Kawai, K., Saito, I. & Sugiyama, H. Conformation-dependent photochemistry of 5-halouracil-containing DNA: Stereospecific 2′-hydroxylation of deoxyribose in Z-form DNA. J. Am. Chem. Soc. 121, 1391-1392 (1999).
-
(1999)
J. Am. Chem. Soc
, vol.121
, pp. 1391-1392
-
-
Kawai, K.1
Saito, I.2
Sugiyama, H.3
-
30
-
-
0037433033
-
Efficient C2′-hydroxylation of deoxyribose in protein-induced Z-form DNA
-
Oyoshi, T., Kawai, K. & Sugiyama, H. Efficient C2′-hydroxylation of deoxyribose in protein-induced Z-form DNA. J. Am. Chem. Soc. 125, 1526-1531 (2003).
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 1526-1531
-
-
Oyoshi, T.1
Kawai, K.2
Sugiyama, H.3
-
31
-
-
0242330787
-
8-Methylguanosine: A powerful Z-DNA stabilizer
-
Xu, Y., Ikeda, R. & Sugiyama, H. 8-Methylguanosine: A powerful Z-DNA stabilizer. J. Am. Chem. Soc. 125, 13519-13524 (2003).
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 13519-13524
-
-
Xu, Y.1
Ikeda, R.2
Sugiyama, H.3
-
32
-
-
0037070386
-
Photoreactivity of 5-iodouracil-containing DNA-Sso7d complex in solution: The protein-induced DNA kink causes intrastrand hydrogen abstraction from the 5-methyl of thymine at the 5′ side
-
Oyoshi, T., Wang, A.H.-J. & Sugiyama, H. Photoreactivity of 5-iodouracil-containing DNA-Sso7d complex in solution: The protein-induced DNA kink causes intrastrand hydrogen abstraction from the 5-methyl of thymine at the 5′ side. J. Am. Chem. Soc. 124 2086-2087 (2002).
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 2086-2087
-
-
Oyoshi, T.1
Wang, A.H.-J.2
Sugiyama, H.3
-
33
-
-
2442676468
-
Highly efficient photochemical 2′-deoxyribonolactone formation at the diagonal loop of a 5-iodouracil-containing antiparallel G-quartet
-
Xu, Y. & Sugiyama, H. Highly efficient photochemical 2′-deoxyribonolactone formation at the diagonal loop of a 5-iodouracil-containing antiparallel G-quartet. J. Am. Chem. Soc. 126, 6274-6279 (2004).
-
(2004)
J. Am. Chem. Soc
, vol.126
, pp. 6274-6279
-
-
Xu, Y.1
Sugiyama, H.2
-
34
-
-
0029808213
-
The development and use of a DNA polymerase arrest assay for the evaluation of parameters affecting intrastrand tetraplex formation
-
Weitzmann, M.N., Woodford, K.J. & Usdin, K. The development and use of a DNA polymerase arrest assay for the evaluation of parameters affecting intrastrand tetraplex formation. J. Biol. Chem. 271, 20958-20964 (1996).
-
(1996)
J. Biol. Chem
, vol.271
, pp. 20958-20964
-
-
Weitzmann, M.N.1
Woodford, K.J.2
Usdin, K.3
-
35
-
-
0035063183
-
The Rb/E2F pathway and cancer
-
Nevins, J.R. The Rb/E2F pathway and cancer. Hum. Mol. Genet. 10 699-703 (2001).
-
(2001)
Hum. Mol. Genet
, vol.10
, pp. 699-703
-
-
Nevins, J.R.1
-
36
-
-
0027717964
-
Photocrosslinking of 5-iodouracil-substituted RNA and DNA to proteins
-
Willis, M.C. et al. Photocrosslinking of 5-iodouracil-substituted RNA and DNA to proteins. Science 262, 1255-1257 (1993).
-
(1993)
Science
, vol.262
, pp. 1255-1257
-
-
Willis, M.C.1
-
37
-
-
0141645602
-
Excess electron transfer from an internally conjugated aromatic amine to 5-bromo-2′-deoxyuridine in DNA
-
Ito, T. & Rokita, S.E. Excess electron transfer from an internally conjugated aromatic amine to 5-bromo-2′-deoxyuridine in DNA. J. Am. Chem. Soc. 125, 11480-11481 (2003).
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 11480-11481
-
-
Ito, T.1
Rokita, S.E.2
-
38
-
-
29544436589
-
Complex sequence dependence by excess-electron transfer through DNA with different strength electron acceptors
-
Manetto, A., Breeger, S., Chatgilialoglu, C. & Carell, T. Complex sequence dependence by excess-electron transfer through DNA with different strength electron acceptors. Angew. Chem. Int. Ed. Engl. 45, 318-321 (2005).
-
(2005)
Angew. Chem. Int. Ed. Engl
, vol.45
, pp. 318-321
-
-
Manetto, A.1
Breeger, S.2
Chatgilialoglu, C.3
Carell, T.4
-
39
-
-
11844286963
-
Efficient generation of 2′-deoxyuridin-5-yl at 5′-(G/C)AA(X)U(X U-3′ (X = Br, I) sequences in duplex DNA under UV irradiation
-
Watanabe, T., Bando, T., Xu, Y., Tashiro, R. & Sugiyama, H. Efficient generation of 2′-deoxyuridin-5-yl at 5′-(G/C)AA(X)U(X U-3′ (X = Br, I) sequences in duplex DNA under UV irradiation. J. Am. Chem. Soc. 127, 44-45 (2005).
-
(2005)
J. Am. Chem. Soc
, vol.127
, pp. 44-45
-
-
Watanabe, T.1
Bando, T.2
Xu, Y.3
Tashiro, R.4
Sugiyama, H.5
-
40
-
-
33750947874
-
Photoreactivation of DNA by an archaeal nucleoprotein Sso7d
-
Tashiro, R., Wang, A.H.-J. & Sugiyama, H. Photoreactivation of DNA by an archaeal nucleoprotein Sso7d. Proc. Natl. Acad. Sci. USA 103 16655-16659 (2006).
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 16655-16659
-
-
Tashiro, R.1
Wang, A.H.-J.2
Sugiyama, H.3
-
41
-
-
0030577491
-
New synthetic method of 5-formyluracil-containing oligonucleotides and their melting behavior
-
Sugiyama, H. New synthetic method of 5-formyluracil-containing oligonucleotides and their melting behavior. Tetrahedr. Lett. 37, 9067-9070 (1996).
-
(1996)
Tetrahedr. Lett
, vol.37
, pp. 9067-9070
-
-
Sugiyama, H.1
-
42
-
-
0030007499
-
Synthesis, structure and thermodynamic properties of 8-methylguanine-containing oligonucleotides: Z-DNA under physiological salt conditions
-
Sugiyama, H. et al. Synthesis, structure and thermodynamic properties of 8-methylguanine-containing oligonucleotides: Z-DNA under physiological salt conditions. Nucleic Acids Res. 24, 1272-1278 (1996).
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 1272-1278
-
-
Sugiyama, H.1
-
43
-
-
0032558388
-
Spectroscopic characterization of a DNA-binding domain, Z, from the editing enzyme, dsRNA adenosine deaminase: Evidence for left-handed Z-DNA in the Z-DNA complex
-
Berger, I. et al. Spectroscopic characterization of a DNA-binding domain, Z, from the editing enzyme, dsRNA adenosine deaminase: Evidence for left-handed Z-DNA in the Z-DNA complex. Biochemistry 37, 13313-13315 (1998).
-
(1998)
Biochemistry
, vol.37
, pp. 13313-13315
-
-
Berger, I.1
-
44
-
-
0031718377
-
The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA
-
Gao, Y.-G. et al. The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA. Nat. Struct. Biol. 5 782-785 (1998).
-
(1998)
Nat. Struct. Biol
, vol.5
, pp. 782-785
-
-
Gao, Y.-G.1
-
45
-
-
0033546005
-
Crystal structure of the Zα domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA
-
Schwartz, T., Rould, M.A., Lowenhaupt, K., Herbert, A. & Rich, A. Crystal structure of the Zα domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA. Science 284, 1841-1845 (1999).
-
(1999)
Science
, vol.284
, pp. 1841-1845
-
-
Schwartz, T.1
Rould, M.A.2
Lowenhaupt, K.3
Herbert, A.4
Rich, A.5
-
47
-
-
0037142071
-
Crystal structure of parallel quadruplexes from human telomeric DNA
-
Parkinson, G.N., Lee, M.P. & Neidle, S. Crystal structure of parallel quadruplexes from human telomeric DNA. Nature 417, 876-880 (2002).
-
(2002)
Nature
, vol.417
, pp. 876-880
-
-
Parkinson, G.N.1
Lee, M.P.2
Neidle, S.3
|