The development and use of a DNA polymerase arrest assay for the evaluation of parameters affecting intrastrand tetraplex formation

Journal of Biological Chemistry

Volumn 271, Issue 34, 1996, Pages 20958-20964

  Weitzmann, M Neale ^a   Woodford, Kerry J ^a   Usdin, Karen ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE;

ARTICLE; DNA SEQUENCE; DNA STRUCTURE; DNA SYNTHESIS INHIBITION; ENZYME ASSAY; ESCHERICHIA COLI; EUKARYOTE; NONHUMAN; PRIORITY JOURNAL;

BASE COMPOSITION; CELL-FREE SYSTEM; DNA; DNA, SINGLE-STRANDED; DNA-DIRECTED DNA POLYMERASE; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; POTASSIUM; SULFURIC ACID ESTERS; TEMPLATES, GENETIC;

ESCHERICHIA COLI; EUKARYOTA;

EID: 0029808213     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.271.34.20958     Document Type: Article

References (37)

1. Zimmerman, S. B., Cohen, G. H., and Davies, D. R. (1975) J. Mol. Biol. 92, 181-192
2. Leonard, G. A., Zhang, S., Peterson, M. R., Harrop, S. J., Helliwell, J. R., Cruse, W. B., d'Estaintot, B. L., Kennard, O., Brown, T., and Hunter, W. N. (1995) Structure 3, 335-340
3. Kettani, A., Kumar, R. A., and Patel, D. J. (1995) J. Mol. Biol. 254, 638-656
4. Sen, D., and Gilbert, W. (1988) Nature 334, 364-366
5. Williamson, J. R., Raghuraman, M. K., and Cech, T. R. (1989) Cell 59, 871-880
6. Fang, G., and Cech, T. R. (1993) Biochemistry 32, 11646-11657
7. Giraldo, R., Suzuki, M., Chapman, L., and Rhodes, D. (1994) Proc. Natl Acad. Sci. U. S. A. 91, 7658-7662
8. Hammond-Kosack, M. C., Kilpatrick, M. W., and Docherty, K. (1992) J. Mol. Endocrinol. 9, 221-225
9. Guo, Q., Lu, M., and Kallenbach, N. R. (1993) Biochemistry 32, 3596-3603
10. Hardin.C. C., Watson, T., Corregan, M., and Bailey, C. (1992) Biochemistry 31, 833-841
11. Hardin, C. C., Henderson, E., Watson, T., and Prosser, J. K. (1991) Biochemistry 30, 4460-4472
12. Kang, S. M., Wohlrab, F., and Wells, R. D. (1992) J. Biol. Chem. 267, 1259-1264
13. Oka, Y., and Thomas, C. A. J. (1987) Nucleic Acids Res. 15, 8877-8898
14. Sen, D., and Gilbert, W. (1990) Nature 344, 410-414
15. Woodford, K. J., Howell, R. M., and Usdin, K. (1994) J. Biol. Chem. 269, 27029-27035
16. Howell, R. M., Woodford, K. J., Weitzmann, M. N., and Usdin, K. (1996) J. Biol. Chem. 271, 5208-5214
17. Usdin, K., and Woodford, K. J. (1995) Nucleic Acids Res. 23, 4202-4209
18. Chen, F.-M. (1995) J. Biol. Chem. 270, 23090-23096
19. Kaspar, P., Zadrazil, S., and Fabry, M. (1989) Nucl. Acids Res. 17, 3616
20. Samadashwily, G. M., Dayn, A., and Mirkin, S. M. (1993) Embo J. 12, 4975-4983
21. Baran, N., Lapidot, A., and Manor, H. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 507-511
22. Macaya, R. F., Schultze, P., Smith, F. W., Roe. J. A., and Feigon, J. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 3745-3749
23. Balagurumoorthy, P., and Brahmachari, S. K. (1994) J. Biol. Chem. 269, 21858-21869
24. Balagurumoorthy, P., Brahmachari, S. K., Mohanty, D., Bansal, M., and Sasisekharan, V. (1992) Nucleic Acids Res. 20, 4061-4967
25. Haasnoot, C. A. G., Hilbers, C. W., van der Marel, G. A., van Boom, J. H., Singh, U. C., Pattabiraman, N., and Kollman, P. A. (1986) J. Biomol. Struct. Dyn. 3, 843-857
26. Lau, Y. T., Yassin, R. R., and Horowitz, S. B. (1988) Science 240, 1321-1323
27. Lewis, C. D., Clark, S. P., Felsenfeld, G., and Gould, H. (1988) Genes Dev. 2, 863-873
28. Abramson, R. D., Barbosa, P., Kalumuck, K., and O'Brien, W. E. (1991) Genomics 10, 126-132
29. Lin, F.-K., Suggs, S., Lin, C.-H., Browne, J. K., Smalling, R., Egrie, J. C., Chen, K. K., Fox, G. M., Martin, F., Stabinsky, Z., Badrawi, S. M., Lai, P.-H., and Goldwasser, E. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 7580-7584
30. Keime, S., Adham, I. M., and Engel, W. (1990) Eur. J. Biochem. 190, 195-200
31. Ware, V. C., Tague, B. W., Clark, C. G., Gourse, R. L., Brand, R. C., and Gerbi, S. A. (1983) Nucleic Acids Res. 11, 7795-7817
32. Brown, C. J., Ballabio, A., Rupert, J. L., Lafreniere, R. G., Grompe, M., Tonlorenzi, R., and Willard, H. F. (1991) Nature 349, 38-44
33. Pachnis, V., Brannan, C. I., and Tilghman, S. M. (1988) EMBO J. 7, 673-681
34. Dombroski, B. A., Mathias, S. L., Nanthakumar, E., Scott, A. F., and Kazazian, H. J. (1991) Science 254, 1805-1808
35. Kunkel, T. A. (1992) Bioessays 14, 303-308
36. Voloshin, O. N., Veselkov, A. G., Belotserkovskii, B. P., Danilevskaya, O. N., Pavlova, M. N., Dobrynin, V. N., and Frank-Kamenetskii, M. D. (1992) J. Biomol. Struct. Dyn. 9, 643-652
37. Hammond-Kosack, M. C., Dobrinski, B., Lurz, R., Docherty, K., and Kilpatrick, M. W. (1992) Nucleic Acids Res. 20, 231-236