-
1
-
-
0029818551
-
Structural features and light-dependent changes in the cytoplasmic interhelical E-F loop region of rhodopsin: A site-directed spin- labeling study
-
Altenbach C, Yang K, Farrens DL, Farahbakhsh ZT, Khorana HG, Hubbell WL: Structural features and light-dependent changes in the cytoplasmic interhelical E-F loop region of rhodopsin: a site-directed spin- labeling study. Biochemistry 1996;35:12470-12478.
-
(1996)
Biochemistry
, vol.35
, pp. 12470-12478
-
-
Altenbach, C.1
Yang, K.2
Farrens, D.L.3
Farahbakhsh, Z.T.4
Khorana, H.G.5
Hubbell, W.L.6
-
2
-
-
0034734260
-
Protonation reactions and their coupling in bacteriorhodopsin
-
Balashov SP: Protonation reactions and their coupling in bacteriorhodopsin. Biochim Biophys Acta 2000;1460:75-94.
-
(2000)
Biochim Biophys Acta
, vol.1460
, pp. 75-94
-
-
Balashov, S.P.1
-
3
-
-
0030069626
-
Titration of aspartate-85 in bacteriorhodopsin: What it says about chromophore isomerization and proton release
-
Balashov SP, Imasheva ES, Govindjee R, Ebrey TG: Titration of aspartate-85 in bacteriorhodopsin: what it says about chromophore isomerization and proton release. Biophys J 1996a;70:473-481.
-
(1996)
Biophys J
, vol.70
, pp. 473-481
-
-
Balashov, S.P.1
Imasheva, E.S.2
Govindjee, R.3
Ebrey, T.G.4
-
5
-
-
0034734242
-
Chemical and physical evidence for multiple functional steps comprising the M state of the bacteriorhodopsin photocycle
-
Betancourt FM, Glaeser RM: Chemical and physical evidence for multiple functional steps comprising the M state of the bacteriorhodopsin photocycle. Biochim Biophys Acta 2000;1460:106-118.
-
(2000)
Biochim Biophys Acta
, vol.1460
, pp. 106-118
-
-
Betancourt, F.M.1
Glaeser, R.M.2
-
6
-
-
0027031210
-
Time-resolved Fourier transform infrared spectroscopy of the bacteriorhodopsin mutant Tyr-185-Phe: Asp-96 reprotonates during O formation, As-85 and Asp-212 deprotonate during O decay
-
Bousché O, Sonar S, Krebs MP, Khorana HG, Rothschild KJ: Time-resolved Fourier transform infrared spectroscopy of the bacteriorhodopsin mutant Tyr-185-Phe: Asp-96 reprotonates during O formation, As-85 and Asp-212 deprotonate during O decay. Photochem Photobiol 1992;56:1085-1095.
-
(1992)
Photochem Photobiol
, vol.56
, pp. 1085-1095
-
-
Bousché, O.1
Sonar, S.2
Krebs, M.P.3
Khorana, H.G.4
Rothschild, K.J.5
-
7
-
-
0020008581
-
Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: Evidence for a distorted 13-cis retinal chromophore
-
Braiman MS, Mathies RA: Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: evidence for a distorted 13-cis retinal chromophore. Proc Natl Acad Sci USA 1982;79:403-407.
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 403-407
-
-
Braiman, M.S.1
Mathies, R.A.2
-
8
-
-
0035498346
-
Proton transport mechanism of bacteriorhodopsin as revealed by site-specific mutagenesis and protein sequence variability
-
Brown LS: Proton transport mechanism of bacteriorhodopsin as revealed by site-specific mutagenesis and protein sequence variability. Biochemistry (Mosc) 2001;66:1249-1255.
-
(2001)
Biochemistry (Mosc)
, vol.66
, pp. 1249-1255
-
-
Brown, L.S.1
-
9
-
-
0027244529
-
Estimated acid dissociation constants of the Schiff base, Asp-85, and Arg-82 during the bacteriorhodopsin photocycle
-
Brown LS, Bonet L, Needleman R, Lanyi JK: Estimated acid dissociation constants of the Schiff base, Asp-85, and Arg-82 during the bacteriorhodopsin photocycle. Biophys J 1993;65:124-130.
-
(1993)
Biophys J
, vol.65
, pp. 124-130
-
-
Brown, L.S.1
Bonet, L.2
Needleman, R.3
Lanyi, J.K.4
-
10
-
-
0031689147
-
Connectivity of the retinal Schiff base to Asp85 and Asp96 during the bacteriorhodopsin photocycle: The local-access model
-
Brown LS, Dioumaev AK, Needleman R, Lanyi JK: Connectivity of the retinal Schiff base to Asp85 and Asp96 during the bacteriorhodopsin photocycle: the local-access model. Biophys J 1998a;75:1455-1465.
-
(1998)
Biophys J
, vol.75
, pp. 1455-1465
-
-
Brown, L.S.1
Dioumaev, A.K.2
Needleman, R.3
Lanyi, J.K.4
-
12
-
-
0030974121
-
A local electrostatic change is the cause of the large-scale protein conformation shift in bacteriorhodopsin
-
Brown, LS, Kamikubo H, Zimányi L, Kataoka M, Tokunaga F, Verdegem P, Lugtenburg J, Lanyi JK: A local electrostatic change is the cause of the large-scale protein conformation shift in bacteriorhodopsin. Proc Natl Acad Sci USA 1997;94:5040-5044.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 5040-5044
-
-
Brown, L.S.1
Kamikubo, H.2
Zimányi, L.3
Kataoka, M.4
Tokunaga, F.5
Verdegem, P.6
Lugtenburg, J.7
Lanyi, J.K.8
-
13
-
-
0036299067
-
Conformational change of the E-F interhelical loop in the M photointermediate of bacteriorhodopsin
-
Brown LS, Needleman R, Lanyi JK: Conformational change of the E-F interhelical loop in the M photointermediate of bacteriorhodopsin. J Mol Biol 2002;317:471-478.
-
(2002)
J Mol Biol
, vol.317
, pp. 471-478
-
-
Brown, L.S.1
Needleman, R.2
Lanyi, J.K.3
-
15
-
-
33846572339
-
Electron paramagnetic resonance study of structural changes in the O photointermediate of bacteriorhodopsin
-
Chen D, Wang JM, Lanyi JK: Electron paramagnetic resonance study of structural changes in the O photointermediate of bacteriorhodopsin. J Mol Biol 2007;366:790-805.
-
(2007)
J Mol Biol
, vol.366
, pp. 790-805
-
-
Chen, D.1
Wang, J.M.2
Lanyi, J.K.3
-
16
-
-
0024744871
-
Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction
-
Dencher NA, Dresselhaus D, Zaccai G, Bueldt G: Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction. Proc Natl Acad Sci USA 1989;86:7876-7879.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 7876-7879
-
-
Dencher, N.A.1
Dresselhaus, D.2
Zaccai, G.3
Bueldt, G.4
-
17
-
-
0032516460
-
Partitioning of free energy gain between the photoisomerized retinal and the protein in bacteriorhodopsin
-
Dioumaev AK, Brown LS, Needleman R, Lanyi JK: Partitioning of free energy gain between the photoisomerized retinal and the protein in bacteriorhodopsin. Biochemistry 1998;37:9889-9893.
-
(1998)
Biochemistry
, vol.37
, pp. 9889-9893
-
-
Dioumaev, A.K.1
Brown, L.S.2
Needleman, R.3
Lanyi, J.K.4
-
18
-
-
0035949633
-
Coupling of the reisomerization of the retinal, proton uptake, and reprotonation of Asp-96 in the N photointermediate of bacteriorhodopsin
-
Dioumaev AK, Brown LS, Needleman R, Lanyi JK: Coupling of the reisomerization of the retinal, proton uptake, and reprotonation of Asp-96 in the N photointermediate of bacteriorhodopsin. Biochemistry 2001;40:11308-11317.
-
(2001)
Biochemistry
, vol.40
, pp. 11308-11317
-
-
Dioumaev, A.K.1
Brown, L.S.2
Needleman, R.3
Lanyi, J.K.4
-
19
-
-
2442656919
-
Atomic resolution structures and the mechanism of ion pumping in bacteriorhodopsin
-
Edmonds BW, Luecke H: Atomic resolution structures and the mechanism of ion pumping in bacteriorhodopsin. Front Biosci 2004;9:1556-1566.
-
(2004)
Front Biosci
, vol.9
, pp. 1556-1566
-
-
Edmonds, B.W.1
Luecke, H.2
-
20
-
-
0024280218
-
Chromophore structure in bacteriorhodopsin's N intermediate: Implications for the proton-pumping mechanism
-
Fodor SPA, Ames JB, Gebhard R, Van den Berg EMM, Stoeckenius W, Lugtenburg J, Mathies RA: Chromophore structure in bacteriorhodopsin's N intermediate: implications for the proton-pumping mechanism. Biochemistry 1988;27:7097-7101.
-
(1988)
Biochemistry
, vol.27
, pp. 7097-7101
-
-
Fodor, S.P.A.1
Ames, J.B.2
Gebhard, R.3
Van den Berg, E.M.M.4
Stoeckenius, W.5
Lugtenburg, J.6
Mathies, R.A.7
-
24
-
-
0036089699
-
Magnetic resonance studies of the bacteriorhodopsin pump cycle
-
Herzfeld J, Lansing JC: Magnetic resonance studies of the bacteriorhodopsin pump cycle. Annu Rev Biophys Biomol Struct 2002;31:73-95.
-
(2002)
Annu Rev Biophys Biomol Struct
, vol.31
, pp. 73-95
-
-
Herzfeld, J.1
Lansing, J.C.2
-
25
-
-
0034734227
-
NMR probes of vectoriality in the proton-motive photocycle of bacteriorhodopsin: Evidence for an 'electrostatic steering' mechanism
-
Herzfeld J, Tounge B: NMR probes of vectoriality in the proton-motive photocycle of bacteriorhodopsin: evidence for an 'electrostatic steering' mechanism. Biochim Biophys Acta 2000;1460:95-105.
-
(2000)
Biochim Biophys Acta
, vol.1460
, pp. 95-105
-
-
Herzfeld, J.1
Tounge, B.2
-
26
-
-
0038053899
-
Structural insights into the mechanism of proton pumping by bacteriorhodopsin
-
Hirai T, Subramaniam S: Structural insights into the mechanism of proton pumping by bacteriorhodopsin. Febs Lett 2003;545:2-8.
-
(2003)
Febs Lett
, vol.545
, pp. 2-8
-
-
Hirai, T.1
Subramaniam, S.2
-
28
-
-
0029981423
-
Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction
-
Kamikubo H, Kataoka M, Váró G, Oka T, Tokunaga F, Needleman R, Lanyi JK: Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction. Proc Natl Acad Sci USA 1996;93:1386-1390.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 1386-1390
-
-
Kamikubo, H.1
Kataoka, M.2
Váró, G.3
Oka, T.4
Tokunaga, F.5
Needleman, R.6
Lanyi, J.K.7
-
29
-
-
0030813030
-
The last phase of the reprotonation switch in bacteriorhodopsin: The transition between the M-type and the N-type protein conformation depends on hydration
-
Kamikubo H, Oka T, Imamoto Y, Tokunaga F, Lanyi JK, Kataoka M: The last phase of the reprotonation switch in bacteriorhodopsin: the transition between the M-type and the N-type protein conformation depends on hydration. Biochemistry 1997;36:12282-12287.
-
(1997)
Biochemistry
, vol.36
, pp. 12282-12287
-
-
Kamikubo, H.1
Oka, T.2
Imamoto, Y.3
Tokunaga, F.4
Lanyi, J.K.5
Kataoka, M.6
-
30
-
-
12944281822
-
Local and distant protein structural changes on photoisomerization of the retinal in bacteriorhodopsin
-
Kandori H, Kinoshita N, Yamazaki Y, Maeda A, Shichida Y, Needleman R, Lanyi JK, Bizounok M, Herzfeld J, Raap J, Lugtenburg J: Local and distant protein structural changes on photoisomerization of the retinal in bacteriorhodopsin. Proc Natl Acad Sci USA 2000;97:4643-4648.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 4643-4648
-
-
Kandori, H.1
Kinoshita, N.2
Yamazaki, Y.3
Maeda, A.4
Shichida, Y.5
Needleman, R.6
Lanyi, J.K.7
Bizounok, M.8
Herzfeld, J.9
Raap, J.10
Lugtenburg, J.11
-
31
-
-
0030904207
-
Time-resolved Fourier transform infrared study of structural changes in the last steps of the photocycles of Glu-204 and Leu-93 mutants of bacteriorhodopsin
-
Kandori H, Yamazaki Y, Hatanaka M, Needleman R, Brown LS, Richter HT, Lanyi JK, Maeda A: Time-resolved Fourier transform infrared study of structural changes in the last steps of the photocycles of Glu-204 and Leu-93 mutants of bacteriorhodopsin. Biochemistry 1997;36:5134-5141.
-
(1997)
Biochemistry
, vol.36
, pp. 5134-5141
-
-
Kandori, H.1
Yamazaki, Y.2
Hatanaka, M.3
Needleman, R.4
Brown, L.S.5
Richter, H.T.6
Lanyi, J.K.7
Maeda, A.8
-
32
-
-
0028148362
-
Energy coupling in an ion pump. The reprotonation switch of bacteriorhodopsin
-
Kataoka M, Kamikubo H, Tokunaga F, Brown LS, Yamazaki Y, Maeda A, Sheves M, Needleman R, Lanyi JK: Energy coupling in an ion pump. The reprotonation switch of bacteriorhodopsin. J Mol Biol 1994;243:621-638.
-
(1994)
J Mol Biol
, vol.243
, pp. 621-638
-
-
Kataoka, M.1
Kamikubo, H.2
Tokunaga, F.3
Brown, L.S.4
Yamazaki, Y.5
Maeda, A.6
Sheves, M.7
Needleman, R.8
Lanyi, J.K.9
-
33
-
-
1942436349
-
The archaeal sensory rhodopsin II/transducer complex: A model for transmembrane signal transfer
-
Klare JP, Gordeliy VI, Labahn J, Buldt G, Steinhoff HJ, Engelhard M: The archaeal sensory rhodopsin II/transducer complex: a model for transmembrane signal transfer. FEBS Lett 2004;564:219-224.
-
(2004)
FEBS Lett
, vol.564
, pp. 219-224
-
-
Klare, J.P.1
Gordeliy, V.I.2
Labahn, J.3
Buldt, G.4
Steinhoff, H.J.5
Engelhard, M.6
-
34
-
-
2942556920
-
X-ray diffraction of bacteriorhodopsin photocycle intermediates
-
Lanyi JK: X-ray diffraction of bacteriorhodopsin photocycle intermediates. Mol Membr Biol 2004;21:143-150.
-
(2004)
Mol Membr Biol
, vol.21
, pp. 143-150
-
-
Lanyi, J.K.1
-
35
-
-
33749078926
-
A structural view of proton transport in bacteriorhodopsin
-
Wikström M ed, London, Royal Society of Chemistry, pp
-
Lanyi JK: A structural view of proton transport in bacteriorhodopsin; in Wikström M (ed): Biophysical and Structural Aspects of Bioenergetics. London, Royal Society of Chemistry, pp 227-248, 2005.
-
(2005)
Biophysical and Structural Aspects of Bioenergetics
, pp. 227-248
-
-
Lanyi, J.K.1
-
36
-
-
0037466289
-
2′ intermediates of the photocycle
-
2′ intermediates of the photocycle. J Mol Biol 2003;328:439-450.
-
(2003)
J Mol Biol
, vol.328
, pp. 439-450
-
-
Lanyi, J.K.1
Schobert, B.2
-
37
-
-
0346727449
-
Local-global conformational coupling in a heptahelical membrane protein: Transport mechanism from crystal structures of the nine states in the bacteriorhodopsin photocycle
-
Lanyi JK, Schobert B: Local-global conformational coupling in a heptahelical membrane protein: transport mechanism from crystal structures of the nine states in the bacteriorhodopsin photocycle. Biochemistry 2004;43:3-8.
-
(2004)
Biochemistry
, vol.43
, pp. 3-8
-
-
Lanyi, J.K.1
Schobert, B.2
-
38
-
-
33749337569
-
Propagating structural perturbation inside bacteriorhodopsin: Crystal structures of the M state and the D96A and T46V mutants
-
Lanyi JK, Schobert B: Propagating structural perturbation inside bacteriorhodopsin: crystal structures of the M state and the D96A and T46V mutants. Biochemistry 2006;45:12003-12010.
-
(2006)
Biochemistry
, vol.45
, pp. 12003-12010
-
-
Lanyi, J.K.1
Schobert, B.2
-
39
-
-
33845971819
-
Structural changes in the L photointermediate of bacteriorhodopsin
-
Lanyi JK, Schobert B: Structural changes in the L photointermediate of bacteriorhodopsin. J Mol Biol 2007;365:1379-1392.
-
(2007)
J Mol Biol
, vol.365
, pp. 1379-1392
-
-
Lanyi, J.K.1
Schobert, B.2
-
40
-
-
85005688720
-
The photocycles of bacteriorhodopsin
-
Lanyi JK, Váró G: The photocycles of bacteriorhodopsin. Isr J Chem 1995;35:365-385.
-
(1995)
Isr J Chem
, vol.35
, pp. 365-385
-
-
Lanyi, J.K.1
Váró, G.2
-
42
-
-
0037285261
-
Structural clues to the mechanism of ion pumping in bacteriorhodopsin
-
Luecke H, Lanyi JK: Structural clues to the mechanism of ion pumping in bacteriorhodopsin. Adv Protein Chem 2003;63:111-130.
-
(2003)
Adv Protein Chem
, vol.63
, pp. 111-130
-
-
Luecke, H.1
Lanyi, J.K.2
-
43
-
-
0033536594
-
Structural changes in bacteriorhodopsin during ion transport at 2 Angstrom resolution
-
Luecke H, Schobert B, Richter HT, Cartailler JP, Lanyi JK: Structural changes in bacteriorhodopsin during ion transport at 2 Angstrom resolution. Science 1999;286:255-261.
-
(1999)
Science
, vol.286
, pp. 255-261
-
-
Luecke, H.1
Schobert, B.2
Richter, H.T.3
Cartailler, J.P.4
Lanyi, J.K.5
-
44
-
-
0034725554
-
Coupling photoisomerization of the retinal in bacteriorhodopsin to directional transport
-
Luecke H, Schobert B, Richter HT, Cartailler JP, Rosengarth A, Needleman R, Lanyi JK: Coupling photoisomerization of the retinal in bacteriorhodopsin to directional transport. J Mol Biol 2000;300:1237-1255.
-
(2000)
J Mol Biol
, vol.300
, pp. 1237-1255
-
-
Luecke, H.1
Schobert, B.2
Richter, H.T.3
Cartailler, J.P.4
Rosengarth, A.5
Needleman, R.6
Lanyi, J.K.7
-
45
-
-
0035498348
-
Internal water molecules as mobile polar groups for light-induced proton translocation in bacteriorhodopsin and rhodopsin as studied by difference FTIR spectroscopy
-
Maeda A: Internal water molecules as mobile polar groups for light-induced proton translocation in bacteriorhodopsin and rhodopsin as studied by difference FTIR spectroscopy. Biochemistry (Mosc) 2001;66:1256-1268.
-
(2001)
Biochemistry (Mosc)
, vol.66
, pp. 1256-1268
-
-
Maeda, A.1
-
46
-
-
0030987170
-
Intramembrane signaling mediated by hydrogen-bonding of water and carboxyl groups in bacteriorhodopsin and rhodopsin
-
Maeda A, Kandori H, Yamazaki Y, Nishimura S, Hatanaka M, Chon YS, Sasaki J, Needleman R, Lanyi JK: Intramembrane signaling mediated by hydrogen-bonding of water and carboxyl groups in bacteriorhodopsin and rhodopsin. J Biochem (Tokyo) 1997;121:399-406.
-
(1997)
J Biochem (Tokyo)
, vol.121
, pp. 399-406
-
-
Maeda, A.1
Kandori, H.2
Yamazaki, Y.3
Nishimura, S.4
Hatanaka, M.5
Chon, Y.S.6
Sasaki, J.7
Needleman, R.8
Lanyi, J.K.9
-
48
-
-
0036452022
-
Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin
-
Matsui Y, Sakai K, Murakami M, Shiro Y, Adachi S, Okumura H, Kouyama T: Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin. J Mol Biol 2002;324:469-481.
-
(2002)
J Mol Biol
, vol.324
, pp. 469-481
-
-
Matsui, Y.1
Sakai, K.2
Murakami, M.3
Shiro, Y.4
Adachi, S.5
Okumura, H.6
Kouyama, T.7
-
49
-
-
0032144042
-
The structure and mechanism of the family of retinal proteins from halophilic archaea
-
Oesterhelt D: The structure and mechanism of the family of retinal proteins from halophilic archaea. Curr Opin Struct Biol 1998;8:489-500.
-
(1998)
Curr Opin Struct Biol
, vol.8
, pp. 489-500
-
-
Oesterhelt, D.1
-
50
-
-
0033059345
-
Conformational change of helix G in the bacteriorhodopsin photocycle: Investigation with heavy atom labeling and X-ray diffraction
-
Oka T, Kamikubo H, Tokunaga F, Lanyi JK, Needleman R, Kataoka M: Conformational change of helix G in the bacteriorhodopsin photocycle: investigation with heavy atom labeling and X-ray diffraction. Biophys J 1999;76:1018-1023.
-
(1999)
Biophys J
, vol.76
, pp. 1018-1023
-
-
Oka, T.1
Kamikubo, H.2
Tokunaga, F.3
Lanyi, J.K.4
Needleman, R.5
Kataoka, M.6
-
51
-
-
0034687788
-
Time-resolved X-ray diffraction reveals multiple conformations in the M-N transition of the bacteriorhodopsin photocycle
-
Oka T, Yagi N, Fujisawa T, Kamikubo H, Tokunaga F, Kataoka M: Time-resolved X-ray diffraction reveals multiple conformations in the M-N transition of the bacteriorhodopsin photocycle. Proc Natl Acad Sci USA 2000;97:14278-14282.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14278-14282
-
-
Oka, T.1
Yagi, N.2
Fujisawa, T.3
Kamikubo, H.4
Tokunaga, F.5
Kataoka, M.6
-
53
-
-
22544465841
-
Crystal structures of acid blue and alkaline purple forms of bacteriorhodopsin
-
Okumura H, Murakami M, Kouyama T: Crystal structures of acid blue and alkaline purple forms of bacteriorhodopsin. J Mol Biol 2005;351:481-495.
-
(2005)
J Mol Biol
, vol.351
, pp. 481-495
-
-
Okumura, H.1
Murakami, M.2
Kouyama, T.3
-
54
-
-
0024317089
-
Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin
-
Otto H, Marti T, Holz M, Mogi T, Lindau M, Khorana HG, Heyn MP: Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin. Proc Natl Acad Sci USA 1989;86:9228-9232.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 9228-9232
-
-
Otto, H.1
Marti, T.2
Holz, M.3
Mogi, T.4
Lindau, M.5
Khorana, H.G.6
Heyn, M.P.7
-
55
-
-
0034734251
-
Lipidic cubic phase crystallization of bacteriorhodopsin and cryotrapping of intermediates: Towards resolving a revolving photocycle
-
Pebay-Peyroula E, Neutze R, Landau EM: Lipidic cubic phase crystallization of bacteriorhodopsin and cryotrapping of intermediates: towards resolving a revolving photocycle. Biochim Biophys Acta 2000;1460:119-132.
-
(2000)
Biochim Biophys Acta
, vol.1460
, pp. 119-132
-
-
Pebay-Peyroula, E.1
Neutze, R.2
Landau, E.M.3
-
56
-
-
0035016932
-
Time-resolved detection of transient movement of helices F and G in doubly spin-labeled bacteriorhodopsin
-
Radzwill N, Gerwert K, Steinhoff HJ: Time-resolved detection of transient movement of helices F and G in doubly spin-labeled bacteriorhodopsin. Biophys J 2001;80:2856-2866.
-
(2001)
Biophys J
, vol.80
, pp. 2856-2866
-
-
Radzwill, N.1
Gerwert, K.2
Steinhoff, H.J.3
-
57
-
-
0032492706
-
Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network
-
Rammelsberg R, Huhn G, Lubben M, Gerwert K: Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network. Biochemistry 1998;37:5001-5009.
-
(1998)
Biochemistry
, vol.37
, pp. 5001-5009
-
-
Rammelsberg, R.1
Huhn, G.2
Lubben, M.3
Gerwert, K.4
-
59
-
-
0029969750
-
Relationship of retinal configuration and internal proton transfer at the end of the bacteriorhodopsin photocycle
-
Richter HT, Needleman R, Kandori H, Maeda A, Lanyi JK: Relationship of retinal configuration and internal proton transfer at the end of the bacteriorhodopsin photocycle. Biochemistry 1996b;35:15461-15466.
-
(1996)
Biochemistry
, vol.35
, pp. 15461-15466
-
-
Richter, H.T.1
Needleman, R.2
Kandori, H.3
Maeda, A.4
Lanyi, J.K.5
-
60
-
-
0029731742
-
Perturbed interaction between residues 85 and 204 in Tyr-185→Phe and Asp-85→Glu bacteriorhodopsins
-
Richter HT, Needleman R, Lanyi JK: Perturbed interaction between residues 85 and 204 in Tyr-185→Phe and Asp-85→Glu bacteriorhodopsins. Biophys J 1996c;71:3392-3398.
-
(1996)
Biophys J
, vol.71
, pp. 3392-3398
-
-
Richter, H.T.1
Needleman, R.2
Lanyi, J.K.3
-
61
-
-
0034009519
-
Unraveling photoexcited conformational changes of bacteriorhodopsin by time resolved electron paramagnetic resonance spectroscopy
-
Rink T, Pfeiffer M, Oesterhelt D, Gerwert K, Steinhoff HJ: Unraveling photoexcited conformational changes of bacteriorhodopsin by time resolved electron paramagnetic resonance spectroscopy. Biophys J 2000;78:1519-1530.
-
(2000)
Biophys J
, vol.78
, pp. 1519-1530
-
-
Rink, T.1
Pfeiffer, M.2
Oesterhelt, D.3
Gerwert, K.4
Steinhoff, H.J.5
-
62
-
-
0035955561
-
Crystal structure of the D85S mutant of bacteriorhodopsin: Model of an O-like photocycle intermediate
-
Rouhani S, Cartailler JP, Facciotti MT, Walian P, Needleman R, Lanyi JK, Glaeser RM, Luecke H: Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate. J Mol Biol 2001;313:615-628.
-
(2001)
J Mol Biol
, vol.313
, pp. 615-628
-
-
Rouhani, S.1
Cartailler, J.P.2
Facciotti, M.T.3
Walian, P.4
Needleman, R.5
Lanyi, J.K.6
Glaeser, R.M.7
Luecke, H.8
-
63
-
-
0038649076
-
Crystallographic structures of the M and N intermediates of bacteriorhodopsin: Assembly of a hydrogen-bonded chain of water molecules between Asp96 and the retinal Schiff base
-
Schobert B, Brown LS, Lanyi JK: Crystallographic structures of the M and N intermediates of bacteriorhodopsin: assembly of a hydrogen-bonded chain of water molecules between Asp96 and the retinal Schiff base. J Mol Biol 2003;330:553-570.
-
(2003)
J Mol Biol
, vol.330
, pp. 553-570
-
-
Schobert, B.1
Brown, L.S.2
Lanyi, J.K.3
-
64
-
-
0036971196
-
Crystallographic structure of the K intermediate of bacteriorhodopsin: Conservation of free energy after photoisomerization of the retinal
-
Schobert B, Cupp-Vickery J, Hornak V, Smith SO, Lanyi J: Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal. J Mol Biol 2002;321:715-726.
-
(2002)
J Mol Biol
, vol.321
, pp. 715-726
-
-
Schobert, B.1
Cupp-Vickery, J.2
Hornak, V.3
Smith, S.O.4
Lanyi, J.5
-
65
-
-
0021848415
-
Determination of retinal chromophore structure in bacteriorhodopsin with resonance Raman spectroscopy
-
Smith SO, Lugtenburg J, Mathies RA: Determination of retinal chromophore structure in bacteriorhodopsin with resonance Raman spectroscopy. J Membr Biol 1985;85:95-109.
-
(1985)
J Membr Biol
, vol.85
, pp. 95-109
-
-
Smith, S.O.1
Lugtenburg, J.2
Mathies, R.A.3
-
67
-
-
0031747352
-
Variations on a molecular switch: Transport and sensory signalling by archaeal rhodopsins
-
Spudich JL: Variations on a molecular switch: transport and sensory signalling by archaeal rhodopsins. Mol Microbiol 1998;28:1051-1058.
-
(1998)
Mol Microbiol
, vol.28
, pp. 1051-1058
-
-
Spudich, J.L.1
-
68
-
-
0030222328
-
Shuttling between two protein conformations: The common mechanism for sensory transduction and ion transport
-
Spudich JL, Lanyi JK: Shuttling between two protein conformations: the common mechanism for sensory transduction and ion transport. Curr Opin Cell Biol 1996;8:452-457.
-
(1996)
Curr Opin Cell Biol
, vol.8
, pp. 452-457
-
-
Spudich, J.L.1
Lanyi, J.K.2
-
69
-
-
0033005319
-
Bacterial rhodopsins: Evolution of a mechanistic model for the ion pumps
-
Stoeckenius W: Bacterial rhodopsins: evolution of a mechanistic model for the ion pumps. Protein Sci 1999;8:447-459.
-
(1999)
Protein Sci
, vol.8
, pp. 447-459
-
-
Stoeckenius, W.1
-
70
-
-
0027439826
-
Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin
-
Subramaniam S, Gerstein M, Oesterhelt D, Henderson R: Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin. EMBO J 1993;12:1-8.
-
(1993)
EMBO J
, vol.12
, pp. 1-8
-
-
Subramaniam, S.1
Gerstein, M.2
Oesterhelt, D.3
Henderson, R.4
-
71
-
-
0027043105
-
Aspartic acid 85 in bacteriorhodopsin functions both as proton acceptor and negative counterion to the Schiff base
-
Subramaniam S, Greenhalgh DA, Khorana HG: Aspartic acid 85 in bacteriorhodopsin functions both as proton acceptor and negative counterion to the Schiff base. J Biol Chem 1992;267:25730-25733.
-
(1992)
J Biol Chem
, vol.267
, pp. 25730-25733
-
-
Subramaniam, S.1
Greenhalgh, D.A.2
Khorana, H.G.3
-
72
-
-
0034632864
-
Molecular mechanism of vectorial proton translocation by bacteriorhodopsin
-
Subramaniam S, Henderson R: Molecular mechanism of vectorial proton translocation by bacteriorhodopsin. Nature 2000;406:653-657.
-
(2000)
Nature
, vol.406
, pp. 653-657
-
-
Subramaniam, S.1
Henderson, R.2
-
73
-
-
0033582945
-
Protein conformational changes in the bacteriorhodopsin photocycle
-
Subramaniam S, Lindahl M, Bullough P, Faruqi AR, Tittor J, Oesterhelt D, Brown L, Lanyi J, Henderson R: Protein conformational changes in the bacteriorhodopsin photocycle. J Mol Biol 1999;287:145-161.
-
(1999)
J Mol Biol
, vol.287
, pp. 145-161
-
-
Subramaniam, S.1
Lindahl, M.2
Bullough, P.3
Faruqi, A.R.4
Tittor, J.5
Oesterhelt, D.6
Brown, L.7
Lanyi, J.8
Henderson, R.9
-
74
-
-
0031567784
-
Transient channel-opening in bacteriorhodopsin: An EPR study
-
Thorgeirsson TE, Xiao W, Brown LS, Needleman R, Lanyi JK, Shin YK: Transient channel-opening in bacteriorhodopsin: an EPR study. J Mol Biol 1997;273:951-957.
-
(1997)
J Mol Biol
, vol.273
, pp. 951-957
-
-
Thorgeirsson, T.E.1
Xiao, W.2
Brown, L.S.3
Needleman, R.4
Lanyi, J.K.5
Shin, Y.K.6
-
75
-
-
0036307914
-
Proton translocation by bacteriorhodopsin in the absence of substantial conformational changes
-
Tittor J, Paula S, Subramaniam S, Heberle J, Henderson R, Oesterhelt D: Proton translocation by bacteriorhodopsin in the absence of substantial conformational changes. J Mol Biol 2002;319:555-565.
-
(2002)
J Mol Biol
, vol.319
, pp. 555-565
-
-
Tittor, J.1
Paula, S.2
Subramaniam, S.3
Heberle, J.4
Henderson, R.5
Oesterhelt, D.6
-
76
-
-
0027461883
-
Bacteriorhodopsin D85N: Three spectroscopic species in equilibrium
-
Turner GJ, Miercke LJW, Thorgeirsson TE, Kliger DS, Betlach MC, Stroud RM: Bacteriorhodopsin D85N: three spectroscopic species in equilibrium. Biochemistry 1993;32:1332-1337.
-
(1993)
Biochemistry
, vol.32
, pp. 1332-1337
-
-
Turner, G.J.1
Miercke, L.J.W.2
Thorgeirsson, T.E.3
Kliger, D.S.4
Betlach, M.C.5
Stroud, R.M.6
-
77
-
-
0034658269
-
Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography
-
Vonck J: Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography. EMBO J 2000;19:2152-2160.
-
(2000)
EMBO J
, vol.19
, pp. 2152-2160
-
-
Vonck, J.1
-
78
-
-
0034714097
-
Time-resolved detection of transient movement of helix F in spin-labelled pharaonis sensory rhodopsin II
-
Wegener AA, Chizhov I, Engelhard M, Steinhoff HJ: Time-resolved detection of transient movement of helix F in spin-labelled pharaonis sensory rhodopsin II. J Mol Biol 2000;301:881-891.
-
(2000)
J Mol Biol
, vol.301
, pp. 881-891
-
-
Wegener, A.A.1
Chizhov, I.2
Engelhard, M.3
Steinhoff, H.J.4
-
79
-
-
0034671339
-
Light-induced rotation of a transmembrane alpha-helix in bacteriorhodopsin
-
Xiao W, Brown LS, Needleman R, Lanyi JK, Shin YK: Light-induced rotation of a transmembrane alpha-helix in bacteriorhodopsin. J Mol Biol 2000;304:715-721.
-
(2000)
J Mol Biol
, vol.304
, pp. 715-721
-
-
Xiao, W.1
Brown, L.S.2
Needleman, R.3
Lanyi, J.K.4
Shin, Y.K.5
-
80
-
-
0026737320
-
Pathways of proton release in the bacteriorhodopsin photocycle
-
Zimányi L, Váró G, Chang M, Ni B, Needleman R, Lanyi, JK: Pathways of proton release in the bacteriorhodopsin photocycle. Biochemistry 1992;31:8535-8543.
-
(1992)
Biochemistry
, vol.31
, pp. 8535-8543
-
-
Zimányi, L.1
Váró, G.2
Chang, M.3
Ni, B.4
Needleman, R.5
Lanyi, J.K.6
-
81
-
-
0033545872
-
a changes of internal amino acids of bacteriorhodopsin by using time-resolved attenuated total reflection Fourier-transform infrared spectroscopy
-
a changes of internal amino acids of bacteriorhodopsin by using time-resolved attenuated total reflection Fourier-transform infrared spectroscopy. Proc Natl Acad Sci USA 1999;96:5498-5503.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 5498-5503
-
-
Zscherp, C.1
Schlesinger, R.2
Tittor, J.3
Oesterhelt, D.4
Heberle, J.5
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