In situ determination of transient pKa changes of internal amino acids of bacteriorhodopsin by using time-resolved attenuated total reflection Fourier-transform infrared spectroscopy

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 10, 1999, Pages 5498-5503

  Zscherp, Christian ^a,c   Schlesinger, Ramona ^a   Tittor, Jörg ^b   Oesterhelt, Dieter ^b   Heberle, Joachim ^a  

^a FORSCHUNGSZENTRUM JÜLICH   (Germany)

^b MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

^c GOETHE UNIVERSITY   (Germany)

Author keywords

Membrane protein; Photocycle; Proton pump; Proton transfer; Retinal

Indexed keywords

AMINO ACID; BACTERIORHODOPSIN; MEMBRANE PROTEIN; PROTON PUMP;

ARTICLE; CONFORMATIONAL TRANSITION; HALOBACTERIUM SALINARUM; INFRARED SPECTROSCOPY; NONHUMAN; PH; PKA; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTON TRANSPORT; PURPLE MEMBRANE;

AMINO ACIDS; BACTERIORHODOPSINS; HALOBACTERIUM SALINARUM; HYDROGEN-ION CONCENTRATION; MUTATION; PROTON PUMPS; SCHIFF BASES; SPECTROSCOPY, FOURIER TRANSFORM INFRARED;

BACTERIA (MICROORGANISMS); HALOBACTERIUM SALINARUM;

EID: 0033545872     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.10.5498     Document Type: Article

References (51)

1. Fillingame, R. H. (1997) J. Exp. Biol. 200, 217-224.
2. Kaback, H. R. (1997) Proc. Natl. Acad. Sci. USA 94, 5539-5543.
3. Phelps, A., Briggs, C., Mincone, L. & Wohlrab, H. (1996) Biochemistry 35, 10757-10762.
4. Maróti, P., Hanson, D. K., Schiffer, M. & Sebban, P. (1995) Nat. Struct. Biol. 12, 1057-1059.
5. Hallén, S., Brzezinski, P. & Malmström, B. G. (1994) Biochemistry 33, 1467-1472.
6. Sakmar, T. & Fahmy, K. (1995) Israel J. Chem. 35, 325-337.
7. Lanyi, J. K. (1997) J. Biol. Chem. 272, 31209-31212.
8. Bashford, D. & Gerwert, K. (1992) J. Mol. Biol. 223, 473-486.
9. Scharnagl, C., Hettenkofer, J. & Fischer, S. F. (1995) J. Phys. Chem. 99, 7787-7800.
10. Lancaster, C. R. D., Michel, H., Honig, B. & Gunner, M. R. (1996) Biophys. J. 70, 2469-2492.
11. Sandberg, L. & Edholm, O. (1997) Biophys. Chem. 65, 189-204.
12. Siebert, F. (1995) Methods Enzymol. 246, 501-526.
13. Maeda, A. (1995) Israel J. Chem. 35, 387-400.
14. Heberle, J. & Zscherp, C. (1996) Appl. Spectrosc. 50, 588-596.
15. Zscherp, C. & Heberle, J. (1997) J. Phys. Chem. B 101, 10542-10547.
16. Braiman, M. S., Mogi, T., Marti, T., Stern, L. J., Khorana, H. G. & Rothschild, K. J. (1988) Biochemistry 27, 8516-8520.
17. Heberle, J. & Dencher, N. A. (1992) Proc. Natl. Acad. Sci. USA 89, 5996-6000.
18. Brown, L. S., Maeda, A., Kandori, H., Needleman, R. & Lanyi, J. K. (1995) J. Biol. Chem. 270, 27122-27126.
19. Zimányi, L., Váró, G., Chang, M., Ni, B., Needleman, R. & Lanyi, J. K. (1992) Biochemistry 31, 8535-8543.
20. Rammelsberg, R., Huhn, G., Lübben, M. & Gerwert, K. (1998) Biochemistry 37, 5001-5009.
21. Balashov, S. P., Imasheva, E. S., Ebrey, T. G., Chen, N., Menick, D. R. & Crouch, R. K. (1997) Biochemistry 36, 8671-8676.
22. Dioumaev, A. K., Richter, H.-T., Brown, L. S., Tanio, M., Tuzi, S., Saitô, H., Kimura, Y., Needleman, R. & Lanyi, J. K. (1998) Biochemistry 37, 2496-2506.
23. Pebay-Peyroula, E., Rummel, G., Rosenbusch, J. P. & Landau, E. M. (1997) Science 277, 1676-1681.
24. Butt, H. J., Fendler, K., Bamberg, E., Tittor, J. & Oesterhelt, D. (1989) EMBO J. 8, 1657-1663.
25. Gerwert, K., Souvignier, G. & Hess, B. (1990) Proc. Natl. Acad. Sci. USA 87, 9774-9778.
26. Riesle, J., Oesterhelt, D., Dencher, N. A. & Heberle, J. (1996) Biochemistry 35, 6635-6643.
27. Nachliel, E., Gutman, M., Kiryati, S. & Dencher, N. A. (1996) Proc. Natl. Acad. Sci. USA 93, 10747-10752.
28. Kimura, Y., Vassylyev, D. G., Miyazawa, A., Kidera, A., Matsushima, M., Mitsuoka, K., Murata, K., Hirai, T. & Fujiyoshi, Y. (1997) Nature (London) 389, 206-211.
29. Balashov, S. P., Govindjee, R. & Ebrey, T. G. (1991) Biophys. J. 60, 475-490.
30. Ames, J. B. & Mathies, R. A. (1990) Biochemistry 29, 7181-7190.
31. Eisfeld, W., Pusch, C., Diller, R., Lohrmann, R. & Stockburger, M. (1993) Biochemistry 32, 7196-7215.
32. Fukuda, K. & Kouyama, T. (1992) Biochemistry 31, 11740-11747.
33. Dencher, N. A. & Wilms, M. (1975) Biophys. Struct. Mech. 1, 259-271.
34. Cao, Y., Brown, L. S., Needleman, R. & Lanyi, J. K. (1993) Biochemistry 32, 10239-10248.
35. Govindjee, R., Misra, S., Balashov, S. P., Ebrey, T. G., Crouch, R. K. & Menick, D. R. (1996) Biophys. J. 71, 1011-1023.
36. Richter, H.-T., Brown, L. S., Needleman, R. & Lanyi, J. K. (1996) Biochemistry 35, 4054-4062.
37. Cao, Y., Váró, G., Klinger, A. L., Czajkowsky, D. M., Braiman, M. S., Needleman, R. & Lanyi, J. K. (1993) Biochemistry 32, 1981-1990.
38. Oesterhelt, D. & Stoeckenius, W. (1974) Methods Enzymol. 31, 667-686.
39. Gerwert, K., Hess, B., Soppa, J. & Oesterhelt, D. (1989) Proc. Natl. Acad. Sci. USA 86, 4943-4947.
40. Pfefferlé, J. M., Maeda, A., Sasaki, J. & Yoshizawa, T. (1991) Biochemistry 30, 6548-6556.
41. Maeda, A., Sasaki, J., Shichida, Y., Yoshizawa, T., Chang, M., Ni, B., Needleman, R. & Lanyi, J. K. (1992) Biochemistry 31, 4684-4690.
42. Smith, S. O., Pardoen, J. A., Mulder, P. P., Curry, B., Lugtenburg, J. & Mathies, R. A. (1983) Biochemistry 22, 6141-6148.
43. Braiman, M. S., Dioumaev, A. K. & Lewis, J. R. (1996) Biophys. J. 70, 939-947.
44. Száraz, S., Oesterhelt, D. & Ormos, P. (1994) Biophys. J. 67, 1706-1712.
45. Grigorieff, N., Ceska, T. A., Downing, K. H., Baldwin, J. M. & Henderson, R. (1996) J. Mol. Biol. 259, 393-421.
46. Luecke, H., Richter, H.-T. & Lanyi, J. K. (1998) Science 280, 1934-1937.
47. Essen, L.-O., Siegert, R., Lehmann, W. D. & Oesterhelt, D. (1998) Proc. Natl. Acad. Sci. USA 95, 11673-11678.
48. Dencher, N. A., Dresselhaus, D., Zaccai, G. & Büldt, G. (1989) Proc. Natl. Acad. Sci. USA 86, 7876-7879.
49. Koch, M. H. J., Dencher, N. A., Oesterhelt, D., Plöhn, H.-J., Rapp, G. & Buldt, G. (1991) EMBO J. 10, 521-526.
50. Subramaniam, S., Gerstein, M., Oesterhelt, D. & Henderson, R. (1993) EMBO J. 12, 1-8.
51. Fahmy, K., Weidlich, O., Engelhard, M., Sigrist, H. & Siebert, F. (1993) Biochemistry 32, 5862-5869.