-
1
-
-
29144472375
-
A role for the CPF 3′-end processing machinery in RNAP II-dependent gene looping
-
Ansari A. and Hampsey M. 2005. A role for the CPF 3′-end processing machinery in RNAP II-dependent gene looping. Genes Dev. 19: 2969.
-
(2005)
Genes Dev
, vol.19
, pp. 2969
-
-
Ansari, A.1
Hampsey, M.2
-
2
-
-
33645530936
-
High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome
-
Alekseyenko A.A., Larschan E., Lai W.R., Park P.J., and Kuroda M.I. 2006. High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome. Genes Dev. 20: 848.
-
(2006)
Genes Dev
, vol.20
, pp. 848
-
-
Alekseyenko, A.A.1
Larschan, E.2
Lai, W.R.3
Park, P.J.4
Kuroda, M.I.5
-
3
-
-
0028009294
-
Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila
-
Bone J.R., Lavender J., Richman R., Palmer M.J., Turner B.M., and Kuroda M.I. 1994. Acetylated histone H4 on the male X chromosome is associated with dosage compensation in Drosophila. Genes Dev. 8: 96.
-
(1994)
Genes Dev
, vol.8
, pp. 96
-
-
Bone, J.R.1
Lavender, J.2
Richman, R.3
Palmer, M.J.4
Turner, B.M.5
Kuroda, M.I.6
-
4
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
Carrozza M.J., Li B., Florens L., Suganuma T., Swanson S.K., Lee K.K., Shia W.J., Anderson S., Yates J., Washburn M.P., and Workman J.L. 2005. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell 123: 581.
-
(2005)
Cell
, vol.123
, pp. 581
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
Shia, W.J.7
Anderson, S.8
Yates, J.9
Washburn, M.P.10
Workman, J.L.11
-
5
-
-
0242573504
-
The MSL complex levels are critical for its correct targeting to the chromosomes in Drosophila melanogaster
-
Demakova O.V., Kotlikova I.V., Gordadze P.R., Alekseyenko A.A., Kuroda M.I., and Zhimulev I.F. 2003. The MSL complex levels are critical for its correct targeting to the chromosomes in Drosophila melanogaster. Chromosoma 112: 103.
-
(2003)
Chromosoma
, vol.112
, pp. 103
-
-
Demakova, O.V.1
Kotlikova, I.V.2
Gordadze, P.R.3
Alekseyenko, A.A.4
Kuroda, M.I.5
Zhimulev, I.F.6
-
6
-
-
14044275031
-
X chromosome sites autonomously recruit the dosage compensation complex in Drosophila males
-
Fagegaltier D. and Baker B.S. 2004. X chromosome sites autonomously recruit the dosage compensation complex in Drosophila males. PLoS Biol. 2: 1854.
-
(2004)
PLoS Biol
, vol.2
, pp. 1854
-
-
Fagegaltier, D.1
Baker, B.S.2
-
7
-
-
33645520163
-
Chromosome-wide genespecific targeting of the Drosophila dosage compensation complex
-
Gilfillan G.D., Straub T., de Wit E., Greil F., Lamm R., van Steensel B., and Becker P.B. 2006. Chromosome-wide genespecific targeting of the Drosophila dosage compensation complex. Genes Dev. 20: 858.
-
(2006)
Genes Dev
, vol.20
, pp. 858
-
-
Gilfillan, G.D.1
Straub, T.2
de Wit, E.3
Greil, F.4
Lamm, R.5
van Steensel, B.6
Becker, P.B.7
-
8
-
-
25844491702
-
Global regulation of X chromosomal genes by the MSL complex in Drosophila melanogaster
-
Hamada F.N., Park P.J., Gordadze P.R., and Kuroda M.I. 2005. Global regulation of X chromosomal genes by the MSL complex in Drosophila melanogaster. Genes Dev. 19: 2289.
-
(2005)
Genes Dev
, vol.19
, pp. 2289
-
-
Hamada, F.N.1
Park, P.J.2
Gordadze, P.R.3
Kuroda, M.I.4
-
9
-
-
0030891858
-
mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila
-
Hilfiker A., Hilfiker-Kleiner D., Pannuti A., and Lucchesi J.C. 1997. mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila. EMBO J. 16: 2054.
-
(1997)
EMBO J
, vol.16
, pp. 2054
-
-
Hilfiker, A.1
Hilfiker-Kleiner, D.2
Pannuti, A.3
Lucchesi, J.C.4
-
10
-
-
0038801443
-
The Drosophila roX1 RNA gene can overcome silent chromatin by recruiting the male-specific lethal dosage compensation complex
-
Kelley R.L. and Kuroda M.I. 2003. The Drosophila roX1 RNA gene can overcome silent chromatin by recruiting the male-specific lethal dosage compensation complex. Genetics 164: 565.
-
(2003)
Genetics
, vol.164
, pp. 565
-
-
Kelley, R.L.1
Kuroda, M.I.2
-
11
-
-
0033588309
-
Epigenetic spreading of the Drosophila dosage compensation complex from roX RNA genes into flanking chromatin
-
Kelley R.L., Meller V.H., Gordadze P.R., Roman G., Davis R.L., and Kuroda M.I. 1999. Epigenetic spreading of the Drosophila dosage compensation complex from roX RNA genes into flanking chromatin. Cell 98: 513.
-
(1999)
Cell
, vol.98
, pp. 513
-
-
Kelley, R.L.1
Meller, V.H.2
Gordadze, P.R.3
Roman, G.4
Davis, R.L.5
Kuroda, M.I.6
-
12
-
-
27744587302
-
Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex
-
Keogh M.C., Kurdistani S.K., Morris S.A., Ahn S.H., Podolny V., Collins S.R., Schuldiner M., Chin K., Punna T., Thompson N.J., Boone C., Emili A., Weissman J.S., Hughes T.R., Strahl B.D., Grunstein M., Greenblatt J.F., Buratowski S., and Krogan N.J. 2005. Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex. Cell 123: 593.
-
(2005)
Cell
, vol.123
, pp. 593
-
-
Keogh, M.C.1
Kurdistani, S.K.2
Morris, S.A.3
Ahn, S.H.4
Podolny, V.5
Collins, S.R.6
Schuldiner, M.7
Chin, K.8
Punna, T.9
Thompson, N.J.10
Boone, C.11
Emili, A.12
Weissman, J.S.13
Hughes, T.R.14
Strahl, B.D.15
Grunstein, M.16
Greenblatt, J.F.17
Buratowski, S.18
Krogan, N.J.19
-
13
-
-
23844519339
-
A high-resolution map of active promoters in the human genome
-
Kim T.H., Barrera L.O., Zheng M., Qu C., Singer M.A., Richmond T.A., Wu Y., Green R.D., and Ren B. 2005. A high-resolution map of active promoters in the human genome. Nature 436: 876.
-
(2005)
Nature
, vol.436
, pp. 876
-
-
Kim, T.H.1
Barrera, L.O.2
Zheng, M.3
Qu, C.4
Singer, M.A.5
Richmond, T.A.6
Wu, Y.7
Green, R.D.8
Ren, B.9
-
14
-
-
16244384503
-
A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 methylation with transcript elongation
-
Kizer K.O., Phatnani H.P., Sibata Y., Hall H., Greenleaf A.L., and Strahl B.D. 2005. A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 methylation with transcript elongation. Mol. Cell. Biol. 25: 3305.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 3305
-
-
Kizer, K.O.1
Phatnani, H.P.2
Sibata, Y.3
Hall, H.4
Greenleaf, A.L.5
Strahl, B.D.6
-
15
-
-
33644781703
-
The Drosophila dosage compensation complex binds to polytene chromosomes independently of developmental changes in transcription
-
Kotlikova I.V., Demakova O.V., Semeshin V.F., Shloma V.V., Boldyreva L.V., Kuroda M.I., and Zhimulev I.F. 2006. The Drosophila dosage compensation complex binds to polytene chromosomes independently of developmental changes in transcription. Genetics 172: 963.
-
(2006)
Genetics
, vol.172
, pp. 963
-
-
Kotlikova, I.V.1
Demakova, O.V.2
Semeshin, V.F.3
Shloma, V.V.4
Boldyreva, L.V.5
Kuroda, M.I.6
Zhimulev, I.F.7
-
16
-
-
0025944523
-
-
Kuroda M.I., Kernan M.J., Kreber R., Ganetzky B., and Baker B.S. 1991. The maleless protein associates with the X chromosome to regulate dosage compensation in Drosophila. Cell. 66: 935.
-
Kuroda M.I., Kernan M.J., Kreber R., Ganetzky B., and Baker B.S. 1991. The maleless protein associates with the X chromosome to regulate dosage compensation in Drosophila. Cell. 66: 935.
-
-
-
-
17
-
-
33645516399
-
X-chromosome wide profiling of MSL-1 distribution and dosage compensation in Drosophila
-
Legube G., McWeeney S.K., Lercher M.J., and Akhtar A. 2006. X-chromosome wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Genes Dev. 20: 871.
-
(2006)
Genes Dev
, vol.20
, pp. 871
-
-
Legube, G.1
McWeeney, S.K.2
Lercher, M.J.3
Akhtar, A.4
-
18
-
-
0036500632
-
The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex
-
Meller V.H. and Rattner B.P. 2002. The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex. EMBO J. 21: 1084.
-
(2002)
EMBO J
, vol.21
, pp. 1084
-
-
Meller, V.H.1
Rattner, B.P.2
-
19
-
-
27144510368
-
Genome-scale profiling of histone H3.3 replacement patterns
-
Mito Y., Henikoff J.G., and Henikoff S. 2005. Genome-scale profiling of histone H3.3 replacement patterns. Nat. Genet. 37: 1090.
-
(2005)
Nat. Genet
, vol.37
, pp. 1090
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
20
-
-
1842483224
-
Multiple classes of MSL binding sites target dosage compensation to the X chromosome of Drosophila
-
Oh H., Bone J.R., and Kuroda M.I. 2004. Multiple classes of MSL binding sites target dosage compensation to the X chromosome of Drosophila. Curr. Biol. 14: 481.
-
(2004)
Curr. Biol
, vol.14
, pp. 481
-
-
Oh, H.1
Bone, J.R.2
Kuroda, M.I.3
-
21
-
-
0038285493
-
Local spreading of MSL complexes from roX genes on the Drosophila male X chromosome
-
Oh H., Park Y., and Kuroda M.I. 2003. Local spreading of MSL complexes from roX genes on the Drosophila male X chromosome. Genes Dev. 17: 1334.
-
(2003)
Genes Dev
, vol.17
, pp. 1334
-
-
Oh, H.1
Park, Y.2
Kuroda, M.I.3
-
22
-
-
2242492681
-
Extent of chromatin spreading determined by roX RNA recruitment of MSL proteins
-
Park Y., Kelley R.L., Oh H., Kuroda M.I., and Meller V.H. 2002. Extent of chromatin spreading determined by roX RNA recruitment of MSL proteins. Science 298: 1620.
-
(2002)
Science
, vol.298
, pp. 1620
-
-
Park, Y.1
Kelley, R.L.2
Oh, H.3
Kuroda, M.I.4
Meller, V.H.5
-
23
-
-
27144458417
-
Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide
-
Rao B., Shibata Y., Strahl B.D., and Lieb J.D. 2005. Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide. Mol. Cell. Biol. 25: 9447.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 9447
-
-
Rao, B.1
Shibata, Y.2
Strahl, B.D.3
Lieb, J.D.4
-
24
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
Ren B., Robert F., Wyrick J.J., Aparicio O., Jennings E.G., Simon I., Zeitlinger J., Schreiber J., Hannett N., Kanin E., Volkert T.L., Wilson C.J., Bell S.P., and Young R.A. 2000. Genome-wide location and function of DNA binding proteins. Science 290: 2306.
-
(2000)
Science
, vol.290
, pp. 2306
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
25
-
-
0037478652
-
Male-specific lethal complex of Drosophila targets activated regions of the X chromosome for chromatin remodeling
-
Sass G.L., Pannuti A., and Lucchesi J.C. 2003. Male-specific lethal complex of Drosophila targets activated regions of the X chromosome for chromatin remodeling. Proc. Natl. Acad. Sci. 100: 8287.
-
(2003)
Proc. Natl. Acad. Sci
, vol.100
, pp. 8287
-
-
Sass, G.L.1
Pannuti, A.2
Lucchesi, J.C.3
-
26
-
-
32444434989
-
Histone H4-K16 acetylation controls chromatin structure and protein interactions
-
Shogren-Knaak M., Ishii H., Sun J.M., Pazin M.J., Davie J.R., and Peterson C.L. 2006. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science 311: 844.
-
(2006)
Science
, vol.311
, pp. 844
-
-
Shogren-Knaak, M.1
Ishii, H.2
Sun, J.M.3
Pazin, M.J.4
Davie, J.R.5
Peterson, C.L.6
-
27
-
-
0345698603
-
Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes
-
Simic R., Lindstrom D.L., Tran H.G., Roinick K.L., Costa P.J., Johnson A.D., Hartzog G.A., and Arndt K.M. 2003. Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes. EMBO J. 22: 1846.
-
(2003)
EMBO J
, vol.22
, pp. 1846
-
-
Simic, R.1
Lindstrom, D.L.2
Tran, H.G.3
Roinick, K.L.4
Costa, P.J.5
Johnson, A.D.6
Hartzog, G.A.7
Arndt, K.M.8
-
28
-
-
0035943734
-
Linking global histone acetylation to the transcription enhancement of Xchromosomal genes in Drosophila males
-
Smith E.R., Allis C.D., and Lucchesi J.C. 2001. Linking global histone acetylation to the transcription enhancement of Xchromosomal genes in Drosophila males. J. Biol. Chem. 276: 31483.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 31483
-
-
Smith, E.R.1
Allis, C.D.2
Lucchesi, J.C.3
-
29
-
-
0003328368
-
Evidence for large domains of similarly expressed genes in the Drosophila genome
-
Spellman P.T. and Rubin G.M. 2002. Evidence for large domains of similarly expressed genes in the Drosophila genome. J. Biol. 1: 5.
-
(2002)
J. Biol
, vol.1
, pp. 5
-
-
Spellman, P.T.1
Rubin, G.M.2
-
30
-
-
25844440873
-
The Drosophila MSL complex activates the transcription of target genes
-
Straub T., Gilfillan G.D., Maier V.K., and Becker P.B. 2005. The Drosophila MSL complex activates the transcription of target genes. Genes Dev. 19: 2284.
-
(2005)
Genes Dev
, vol.19
, pp. 2284
-
-
Straub, T.1
Gilfillan, G.D.2
Maier, V.K.3
Becker, P.B.4
-
31
-
-
0026566417
-
Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei
-
Turner B.M., Birley A.J., and Lavender J. 1992. Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei. Cell 69: 375.
-
(1992)
Cell
, vol.69
, pp. 375
-
-
Turner, B.M.1
Birley, A.J.2
Lavender, J.3
|