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Volumn 35, Issue 9, 2007, Pages 3016-3031

Escherichia coli ribosomal protein L20 binds as a single monomer to its own mRNA bearing two potential binding sites

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; PROTEIN L20; RIBOSOME PROTEIN; UNCLASSIFIED DRUG; ESCHERICHIA COLI PROTEIN; RPLT PROTEIN, E COLI;

EID: 34250634486     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkm197     Document Type: Article
Times cited : (12)

References (34)
  • 1
    • 34548497200 scopus 로고    scopus 로고
    • Translational control in prokaryotes
    • Matthews,M.B, Sonenberg,N. and Hershey,J.W.B, eds, Cold Spring Harbor Laboratory Press, Cols Spring Harbor, Newyork
    • Romby,P. and Springer,M. (2006).Translational control in prokaryotes. In Matthews,M.B., Sonenberg,N. and Hershey,J.W.B. (eds), Translational Control of Gene Expression, Cold Spring Harbor Laboratory Press, Cols Spring Harbor, Newyork.
    • (2006) Translational Control of Gene Expression
    • Romby, P.1    Springer, M.2
  • 2
    • 0032804078 scopus 로고    scopus 로고
    • Unusual transcriptional and translational regulation of the bacteriophage Mu mom operon
    • Hattman,S. (1999) Unusual transcriptional and translational regulation of the bacteriophage Mu mom operon. Pharmacol. Ther., 84, 367-388.
    • (1999) Pharmacol. Ther , vol.84 , pp. 367-388
    • Hattman, S.1
  • 4
    • 0028251157 scopus 로고
    • Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli
    • Zengel,J.M. and Lindahl,L. (1994) Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli. Prog. Nucleic Acid Res. Mol. Biol., 47, 331-370.
    • (1994) Prog. Nucleic Acid Res. Mol. Biol , vol.47 , pp. 331-370
    • Zengel, J.M.1    Lindahl, L.2
  • 5
    • 0021155247 scopus 로고
    • Regulation of the synthesis of ribosomes and ribosomal components
    • Nomura,M., Gourse,R. and Baughman,G. (1984) Regulation of the synthesis of ribosomes and ribosomal components. Annu. Rev. Biochem., 53 75-117.
    • (1984) Annu. Rev. Biochem , vol.53 , pp. 75-117
    • Nomura, M.1    Gourse, R.2    Baughman, G.3
  • 6
    • 0019126505 scopus 로고
    • Feedback regulation of ribosomal protein gene expression in Escherichia coli: Structural homology of ribosomal RNA and ribosomal protein MRNA
    • Nomura,M., Yates,J.L., Dean,D. and Post,L.E. (1980) Feedback regulation of ribosomal protein gene expression in Escherichia coli: Structural homology of ribosomal RNA and ribosomal protein MRNA. Proc. Natl. Acad. Sci. USA, 77, 7084-7088.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 7084-7088
    • Nomura, M.1    Yates, J.L.2    Dean, D.3    Post, L.E.4
  • 7
    • 0024206339 scopus 로고
    • Translational regulation of the spc operon in Escherichia coli. Identification and structural analysis of the target site for S8 repressor protein
    • Cerretti,D.P., Mattheakis,L.C., Kearney,K.R., Vu,L. and Nomura,M. (1988) Translational regulation of the spc operon in Escherichia coli. Identification and structural analysis of the target site for S8 repressor protein. J. Mol. Biol., 204, 309-329.
    • (1988) J. Mol. Biol , vol.204 , pp. 309-329
    • Cerretti, D.P.1    Mattheakis, L.C.2    Kearney, K.R.3    Vu, L.4    Nomura, M.5
  • 8
    • 0028238892 scopus 로고
    • The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: Minimum structural requirements and the effects of single bulged bases on S8-RNA interaction
    • Wu,H., Jiang,L. and Zimmermann,R.A. (1994) The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction. Nucleic Acids Res., 22, 1687-1695.
    • (1994) Nucleic Acids Res , vol.22 , pp. 1687-1695
    • Wu, H.1    Jiang, L.2    Zimmermann, R.A.3
  • 9
    • 2442702832 scopus 로고    scopus 로고
    • The structure of a ribosomal protein S8/spc operon mRNA complex
    • Merianos,H.J., Wang,J. and Moore,P.B. (2004) The structure of a ribosomal protein S8/spc operon mRNA complex. RNA, 10, 954-964.
    • (2004) RNA , vol.10 , pp. 954-964
    • Merianos, H.J.1    Wang, J.2    Moore, P.B.3
  • 10
    • 0026677337 scopus 로고
    • Messenger RNA secondary structure and translational coupling in the Escherichia coli operon encoding translation initiation factor IF3 and the ribosomal proteins, L35 and L20
    • Lesage,P., Chiaruttini,C., Graffe,M., Dondon,J., Milet,M. and Springer,M. (1992) Messenger RNA secondary structure and translational coupling in the Escherichia coli operon encoding translation initiation factor IF3 and the ribosomal proteins, L35 and L20. J. Mol. Biol., 228, 366-386.
    • (1992) J. Mol. Biol , vol.228 , pp. 366-386
    • Lesage, P.1    Chiaruttini, C.2    Graffe, M.3    Dondon, J.4    Milet, M.5    Springer, M.6
  • 11
    • 0036077693 scopus 로고    scopus 로고
    • Translational feedback regulation of the gene for L35 in Escherichia coli requires binding of ribosomal protein L20 to two sites in its leader mRNA: A possible case of ribosomal RNA-messenger RNA molecular mimicry
    • Guillier,M., Allemand,F., Raibaud,S., Dardel,F., Springer,M. and Chiaruttini,C. (2002) Translational feedback regulation of the gene for L35 in Escherichia coli requires binding of ribosomal protein L20 to two sites in its leader mRNA: A possible case of ribosomal RNA-messenger RNA molecular mimicry. RNA, 8, 878-889.
    • (2002) RNA , vol.8 , pp. 878-889
    • Guillier, M.1    Allemand, F.2    Raibaud, S.3    Dardel, F.4    Springer, M.5    Chiaruttini, C.6
  • 12
    • 17844402318 scopus 로고    scopus 로고
    • Double molecular mimicry in Escherichia coli: Binding of ribosomal protein L20 to its two sites in mRNA is similar to its binding to 23S rRNA
    • Guillier,M., Allemand,F., Dardel,F., Royer,C.A., Springer,M. and Chiaruttini,C. (2005) Double molecular mimicry in Escherichia coli: binding of ribosomal protein L20 to its two sites in mRNA is similar to its binding to 23S rRNA. Mol. Microbiol., 56, 1441-1456.
    • (2005) Mol. Microbiol , vol.56 , pp. 1441-1456
    • Guillier, M.1    Allemand, F.2    Dardel, F.3    Royer, C.A.4    Springer, M.5    Chiaruttini, C.6
  • 13
    • 0029757619 scopus 로고    scopus 로고
    • A long-range RNA-RNA interaction forms a pseudoknot required for translational control of the IF3-L35-L20 ribosomal protein operon in Escherichia coli
    • Chiaruttini,C., Milet,M. and Springer,M. (1996) A long-range RNA-RNA interaction forms a pseudoknot required for translational control of the IF3-L35-L20 ribosomal protein operon in Escherichia coli. EMBO J., 15, 4402-4413.
    • (1996) EMBO J , vol.15 , pp. 4402-4413
    • Chiaruttini, C.1    Milet, M.2    Springer, M.3
  • 14
    • 0141480927 scopus 로고    scopus 로고
    • How bacterial ribosomal protein L20 assembles with 23 S ribosomal RNA and its own messenger RNA
    • Raibaud,S., Vachette,P., Guillier,M., Allemand,F., Chiaruttini,C. and Dardel,F. (2003) How bacterial ribosomal protein L20 assembles with 23 S ribosomal RNA and its own messenger RNA. J. Biol. Chem., 278 36522-36530.
    • (2003) J. Biol. Chem , vol.278 , pp. 36522-36530
    • Raibaud, S.1    Vachette, P.2    Guillier, M.3    Allemand, F.4    Chiaruttini, C.5    Dardel, F.6
  • 15
    • 0023613953 scopus 로고
    • Rapid and efficient site-specific mutagenesis without phenotypic selection
    • Kunkel,T.A., Roberts,J.D. and Zakour,R.A. (1987) Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol., 154, 367-382.
    • (1987) Methods Enzymol , vol.154 , pp. 367-382
    • Kunkel, T.A.1    Roberts, J.D.2    Zakour, R.A.3
  • 16
    • 17844364210 scopus 로고    scopus 로고
    • The N-terminal extension of Escherichia coli ribosomal protein L20 is important for ribosome assembly, but dispensable for translational feedback control
    • Guillier,M., Allemand,F., Graffe,M., Raibaud,S., Dardel,F., Springer,M. and Chiaruttini,C. (2005) The N-terminal extension of Escherichia coli ribosomal protein L20 is important for ribosome assembly, but dispensable for translational feedback control. RNA, 11, 728-738.
    • (2005) RNA , vol.11 , pp. 728-738
    • Guillier, M.1    Allemand, F.2    Graffe, M.3    Raibaud, S.4    Dardel, F.5    Springer, M.6    Chiaruttini, C.7
  • 17
    • 0038120874 scopus 로고    scopus 로고
    • The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli
    • Charollais,J., Pflieger,D., Vinh,J., Dreyfus,M. and Iost,I. (2003) The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli. Mol. Microbiol., 48, 1253-1265.
    • (2003) Mol. Microbiol , vol.48 , pp. 1253-1265
    • Charollais, J.1    Pflieger, D.2    Vinh, J.3    Dreyfus, M.4    Iost, I.5
  • 18
    • 24144444670 scopus 로고    scopus 로고
    • Observation volumes and {gamma}-factors in two-photon fluorescence fluctuation spectroscopy
    • Nagy,A., Wu,J. and Berland,K.M. (2005) Observation volumes and {gamma}-factors in two-photon fluorescence fluctuation spectroscopy. Biophys. J., 89, 2077-2090.
    • (2005) Biophys. J , vol.89 , pp. 2077-2090
    • Nagy, A.1    Wu, J.2    Berland, K.M.3
  • 19
  • 24
    • 33749240780 scopus 로고    scopus 로고
    • Coexistence of two protein folding states in the crystal structure of ribosomal protein L20
    • Timsit,Y., Allemand,F., Chiaruttini,C. and Springer,M. (2006) Coexistence of two protein folding states in the crystal structure of ribosomal protein L20. EMBO Rep., 7, 1013-1018.
    • (2006) EMBO Rep , vol.7 , pp. 1013-1018
    • Timsit, Y.1    Allemand, F.2    Chiaruttini, C.3    Springer, M.4
  • 25
    • 0018459544 scopus 로고
    • Direct chemical method for sequencing RNA
    • Peattie,D.A. (1979) Direct chemical method for sequencing RNA. Proc. Natl. Acad. Sci. USA, 76, 1760-1764.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 1760-1764
    • Peattie, D.A.1
  • 26
    • 0021991295 scopus 로고
    • Secondary structure of the circular form of the Tetrahymena rRNA intervening sequence: A technique for RNA structure analysis using chemical probes and reverse transcriptase
    • Inoue,T. and Cech,T.R. (1985) Secondary structure of the circular form of the Tetrahymena rRNA intervening sequence: A technique for RNA structure analysis using chemical probes and reverse transcriptase. Proc. Natl. Acad. Sci. USA, 82, 648-652.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 648-652
    • Inoue, T.1    Cech, T.R.2
  • 27
    • 0022470564 scopus 로고
    • Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension
    • Moazed,D., Stern,S. and Noller,H.F. (1986) Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension. J. Mol. Biol., 187, 399-416.
    • (1986) J. Mol. Biol , vol.187 , pp. 399-416
    • Moazed, D.1    Stern, S.2    Noller, H.F.3
  • 28
    • 0024270439 scopus 로고
    • Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA
    • Gregory,R.J., Cahill,P.B., Thurlow,D.L. and Zimmermann,R.A. (1988) Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA. J. Mol. Biol., 204 295-307.
    • (1988) J. Mol. Biol , vol.204 , pp. 295-307
    • Gregory, R.J.1    Cahill, P.B.2    Thurlow, D.L.3    Zimmermann, R.A.4
  • 29
    • 0022302437 scopus 로고
    • Specific interaction between ribosomal protein S4 and the alpha operon messenger RNA
    • Deckman,I.C. and Draper,D.E. (1985) Specific interaction between ribosomal protein S4 and the alpha operon messenger RNA. Biochemistry 24, 7860-7865.
    • (1985) Biochemistry , vol.24 , pp. 7860-7865
    • Deckman, I.C.1    Draper, D.E.2
  • 30
    • 0028179103 scopus 로고
    • Structural elements of rps0 mRNA involved in the modulation of translational initiation and regulation of E. coli ribosomal protein S15
    • Philippe,C., Benard,L., Eyermann,F., Cachia,C., Kirillov,S.V., Portier,C., Ehresmann,B. and Ehresmann,C. (1994) Structural elements of rps0 mRNA involved in the modulation of translational initiation and regulation of E. coli ribosomal protein S15. Nucleic Acids Res., 22, 2538-2546.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2538-2546
    • Philippe, C.1    Benard, L.2    Eyermann, F.3    Cachia, C.4    Kirillov, S.V.5    Portier, C.6    Ehresmann, B.7    Ehresmann, C.8
  • 31
    • 0002180310 scopus 로고
    • Translational regulation of ribosomal proteins in Escherichia coli
    • Ilan,J, ed, Plenum press, NewYork, pp
    • Draper,D.E. (1987) Translational regulation of ribosomal proteins in Escherichia coli. Molecular mechanisms. In Ilan,J. (ed), Plenum press, NewYork, pp. 1-26.
    • (1987) Molecular mechanisms , pp. 1-26
    • Draper, D.E.1
  • 32
    • 0027288848 scopus 로고
    • Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site
    • Philippe,C., Eyermann,F., Benard,L., Portier,C., Ehresmann,B. and Ehresmann,C. (1993) Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site. Proc. Natl. Acad. Sci. USA, 90, 4394-4398.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 4394-4398
    • Philippe, C.1    Eyermann, F.2    Benard, L.3    Portier, C.4    Ehresmann, B.5    Ehresmann, C.6
  • 33
    • 0027231423 scopus 로고
    • Allosteric mechanism for translational repression in the Escherichia coli alpha operon
    • Spedding,G. and Draper,D.E. (1993) Allosteric mechanism for translational repression in the Escherichia coli alpha operon. Proc. Natl. Acad. Sci. USA, 90, 4399-4403.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 4399-4403
    • Spedding, G.1    Draper, D.E.2
  • 34
    • 0015954058 scopus 로고
    • Ribosomal protein in E. coli: Rate of synthesis and pool size at different growth rates
    • Gausing,K. (1974) Ribosomal protein in E. coli: Rate of synthesis and pool size at different growth rates. Mol. Gen. Genet., 129, 61-75.
    • (1974) Mol. Gen. Genet , vol.129 , pp. 61-75
    • Gausing, K.1


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