메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

Detecting multivariate differentially expressed genes

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL CONDITIONS; DIFFERENTIAL EXPRESSIONS; DIFFERENTIALLY EXPRESSED GENE; ERROR RATE CONTROL; EXPRESSION PATTERNS; GENE EXPRESSION ANALYSIS; GENE EXPRESSION DATA; SIMULATION STUDIES;

EID: 34250630527     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-150     Document Type: Article
Times cited : (26)

References (38)
  • 1
    • 29244448340 scopus 로고    scopus 로고
    • Microarray data analysis: From disarray to consolidation and consensus
    • 10.1038/nrg1749 16369572
    • Allison DB Cui X Page GP Sabripour M Microarray data analysis: From disarray to consolidation and consensus Nat Rev Genet 2006 7 55-65 10.1038/nrg1749 16369572
    • (2006) Nat Rev Genet , vol.7 , pp. 55-65
    • Allison, D.B.1    Cui, X.2    Page, G.P.3    Sabripour, M.4
  • 2
    • 33745561205 scopus 로고    scopus 로고
    • An introduction to variable and feature selection
    • 10.1162/153244303322753616
    • Guyon I Elisseeff A An introduction to variable and feature selection Journ Mach Learn Res 2003 3 1157-1182 10.1162/153244303322753616
    • (2003) Journ Mach Learn Res , vol.3 , pp. 1157-1182
    • Guyon, I.1    Elisseeff, A.2
  • 4
    • 33645825183 scopus 로고    scopus 로고
    • Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer
    • 1458674 16585533 10.1073/pnas.0601231103
    • Ein-Dor L Zuk O Domany E Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer Proc Natl Acad Sci USA 2006 103 15 5923-5928 1458674 16585533 10.1073/pnas.0601231103
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.15 , pp. 5923-5928
    • Ein-Dor, L.1    Zuk, O.2    Domany, E.3
  • 6
    • 0036430914 scopus 로고    scopus 로고
    • Multiple Tests for Different Sets of Variables Using a Data-Driven Ordering of Hypotheses, with an Application to Gene Expression Data
    • 10.1002/1521-4036(200210)44:7<789::AID-BIMJ789>3.0.CO;2-#
    • Kropf S Läuter J Multiple Tests for Different Sets of Variables Using a Data-Driven Ordering of Hypotheses, with an Application to Gene Expression Data Biometrical journal 2002 44 7 789-800 10.1002/ 1521-4036(200210)44:7<789::AID-BIMJ789>3.0.CO;2-#
    • (2002) Biometrical Journal , vol.44 , Issue.7 , pp. 789-800
    • Kropf, S.1    Läuter, J.2
  • 7
    • 25144474547 scopus 로고    scopus 로고
    • Hotelling's T2 multivariate profiling for detecting differential expression in microarrays
    • 10.1093/bioinformatics/bti496 15905280
    • Lu Y Liu PY Xiao P Deng HW Hotelling's T2 multivariate profiling for detecting differential expression in microarrays Bioinformatics 2005 21 14 3105-3113 10.1093/bioinformatics/bti496 15905280
    • (2005) Bioinformatics , vol.21 , Issue.14 , pp. 3105-3113
    • Lu, Y.1    Liu, P.Y.2    Xiao, P.3    Deng, H.W.4
  • 8
  • 10
    • 2942677611 scopus 로고    scopus 로고
    • Multivariate exploratory tools for microarray data analysis
    • 10.1093/biostatistics/4.4.555 14557111
    • Szabo A Boucher K Jones D Tsodikov AD Multivariate exploratory tools for microarray data analysis Biostatistics 2003 4 4 555-567 10.1093/ biostatistics/4.4.555 14557111
    • (2003) Biostatistics , vol.4 , Issue.4 , pp. 555-567
    • Szabo, A.1    Boucher, K.2    Jones, D.3    Tsodikov, A.D.4
  • 11
    • 13244295509 scopus 로고    scopus 로고
    • Multivariate search for differentially expressed gene combinations
    • 529250 15507138 10.1186/1471-2105-5-164
    • Xiao Y Frisina R Gordon A Klebanov L Yakovlev A Multivariate search for differentially expressed gene combinations BMC Bioinformatics 2004 5 164 529250 15507138 10.1186/1471-2105-5-164
    • (2004) BMC Bioinformatics , vol.5 , pp. 164
    • Xiao, Y.1    Frisina, R.2    Gordon, A.3    Klebanov, L.4    Yakovlev, A.5
  • 12
    • 34548058037 scopus 로고    scopus 로고
    • Searching for differentially expressed gene combinations
    • 1257471 16207359
    • Dettling M Gabrielson E Parmigiani G Searching for differentially expressed gene combinations Genome Biol 2005 6 R88 1257471 16207359
    • (2005) Genome Biol , vol.6
    • Dettling, M.1    Gabrielson, E.2    Parmigiani, G.3
  • 13
    • 0031381525 scopus 로고    scopus 로고
    • Wrappers for feature subset selection
    • 10.1016/S0004-3702(97)00043-X
    • Kohavi R John GH Wrappers for feature subset selection Artificial Intelligence 1997 97 273-324 10.1016/S0004-3702(97)00043-X
    • (1997) Artificial Intelligence , vol.97 , pp. 273-324
    • Kohavi, R.1    John, G.H.2
  • 14
    • 0036161259 scopus 로고    scopus 로고
    • Gene Selection for Cancer Classification using Support Vector Machines
    • 10.1023/A:1012487302797
    • Guyon I Weston J Barnhill S Vapnik V Gene Selection for Cancer Classification using Support Vector Machines Machine Learning 2002 46 389-422 10.1023/A:1012487302797
    • (2002) Machine Learning , vol.46 , pp. 389-422
    • Guyon, I.1    Weston, J.2    Barnhill, S.3    Vapnik, V.4
  • 16
    • 15944364151 scopus 로고    scopus 로고
    • An empirical Bayes approach to inferring large-scale gene association networks
    • 10.1093/bioinformatics/bti062 15479708
    • Schäfer J Strimmer K An empirical Bayes approach to inferring large-scale gene association networks Bioinformatics 2005 21 6 754-764 10.1093/bioinformatics/bti062 15479708
    • (2005) Bioinformatics , vol.21 , Issue.6 , pp. 754-764
    • Schäfer, J.1    Strimmer, K.2
  • 18
    • 0037079054 scopus 로고    scopus 로고
    • Computational systems biology
    • 10.1038/nature01254 12432404
    • Kitano H Computational systems biology Nature 2002 420 206-210 10.1038/ nature01254 12432404
    • (2002) Nature , vol.420 , pp. 206-210
    • Kitano, H.1
  • 19
    • 0842288337 scopus 로고    scopus 로고
    • Inferring Cellular Networks Using Probabilistic Graphical Models
    • 10.1126/science.1094068 14764868
    • Friedman N Inferring Cellular Networks Using Probabilistic Graphical Models Science 2004 303 5659 799-805 10.1126/science.1094068 14764868
    • (2004) Science , vol.303 , Issue.5659 , pp. 799-805
    • Friedman, N.1
  • 23
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y Hochberg Y Controlling the false discovery rate: A practical and powerful approach to multiple testing J R Statist Soc B 1995 57 289-300
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 24
    • 84919436881 scopus 로고
    • Multiparameter hypothesis testing and acceptance sampling
    • 10.2307/1267823
    • Berger RL Multiparameter hypothesis testing and acceptance sampling Technometrics 1982 24 4 295-300 10.2307/1267823
    • (1982) Technometrics , vol.24 , Issue.4 , pp. 295-300
    • Berger, R.L.1
  • 25
    • 0000308754 scopus 로고
    • On a heuristic method of test construction and its use in multivariate analysis
    • Roy S On a heuristic method of test construction and its use in multivariate analysis Ann Math Stat 1953 24 220-38
    • (1953) Ann Math Stat , vol.24 , pp. 220-238
    • Roy, S.1
  • 26
    • 33645762226 scopus 로고
    • A Sharper Bonferroni Procedure for Multiple Tests of Significance
    • 10.1093/biomet/75.4.800
    • Hochberg Y A Sharper Bonferroni Procedure for Multiple Tests of Significance Biometrika 1988 75 4 800-802 10.1093/biomet/75.4.800
    • (1988) Biometrika , vol.75 , Issue.4 , pp. 800-802
    • Hochberg, Y.1
  • 28
    • 13444272087 scopus 로고    scopus 로고
    • Entrez Gene: Gene-centered information at NCBI
    • 539985 15608257 10.1093/nar/gki031
    • Maglott D Ostell J Pruitt KD Tatusova T Entrez Gene: Gene-centered information at NCBI Nucl Acids Res 2005 33 D54-D58 539985 15608257 10.1093/nar/gki031
    • (2005) Nucl Acids Res , vol.33
    • Maglott, D.1    Ostell, J.2    Pruitt, K.D.3    Tatusova, T.4
  • 29
    • 33644903235 scopus 로고    scopus 로고
    • Membrane ion channels and diabetes
    • 10.2174/138161206775474431 16472141
    • Proks P Lippiat J Membrane ion channels and diabetes Curr Pharm Des 2006 12 4 485-501 10.2174/138161206775474431 16472141
    • (2006) Curr Pharm Des , vol.12 , Issue.4 , pp. 485-501
    • Proks, P.1    Lippiat, J.2
  • 31
    • 33644854484 scopus 로고    scopus 로고
    • Rho GTPases: Promising cellular targets for novel anticancer drugs
    • 10.2174/156800906775471752 16475973
    • Fritz G Kaina B Rho GTPases: Promising cellular targets for novel anticancer drugs Curr Cancer Drug Targets 2006 6 1-14 10.2174/ 156800906775471752 16475973
    • (2006) Curr Cancer Drug Targets , vol.6 , pp. 1-14
    • Fritz, G.1    Kaina, B.2
  • 33
    • 27544503451 scopus 로고    scopus 로고
    • Growing Bayesian network models of gene networks from seed genes
    • 10.1093/bioinformatics/bti1137 16204109
    • Peña JM Björkegren J Tegnér J Growing Bayesian network models of gene networks from seed genes Bioinformatics 2005 21 suppl 2 ii224-229 10.1093/bioinformatics/bti1137 16204109
    • (2005) Bioinformatics , vol.21 , Issue.SUPPL. 2
    • Peña, J.M.1    Björkegren, J.2    Tegnér, J.3
  • 34
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • 170937 12883005 10.1073/pnas.1530509100
    • Storey JD Tibshirani R Statistical significance for genomewide studies Proc Natl Acad Sci 2003 100 16 9440-45 170937 12883005 10.1073/ pnas.1530509100
    • (2003) Proc Natl Acad Sci , vol.100 , Issue.16 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2
  • 37
    • 84886759854 scopus 로고    scopus 로고
    • The Diabetes Genome Anatomy Project http://www.diabetesgenome.org
  • 38
    • 84886765109 scopus 로고    scopus 로고
    • Rosetta Inpharmatics
    • Rosetta Inpharmatics http://www.rii.com/publications/2002/vantveer.html


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.