A transcription-dependent micrococcal nuclease-resistant fragment of the urokinase-type plasminogen activator promoter interacts with the enhancer

Journal of Biological Chemistry

Volumn 282, Issue 17, 2007, Pages 12537-12546

  Ferrai, Carmelo ^a   Munari, Davide ^a   Luraghi, Paolo ^a   Pecciarini, Lorenza ^a   Cangi, Maria Giulia ^a   Doglioni, Claudio ^a   Blasi, Francesco ^b,c   Crippa, Massimo P ^a  

^a SAN RAFFAELE HOSPITAL   (Italy)

^b VITA SALUTE SAN RAFFAELE UNIVERSITY   (Italy)

^c FIRC INSTITUTE OF MOLECULAR ONCOLOGY   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

CROSSLINKING; GENES; IMMUNOLOGY; MOLECULAR INTERACTIONS; TRANSCRIPTION;

AMANITIN; CHROMATIN IMMUNOPRECIPITATION; MICROCOCCAL NUCLEASE CLEAVAGE; PLASMINOGEN;

ENZYME KINETICS;

ALPHA AMANITIN; MICROCOCCAL NUCLEASE; UROKINASE RECEPTOR; UROKINASE;

ARTICLE; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; CROSS LINKING; GENOME; HUMAN; HUMAN CELL; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONTENT; PROTEIN INTERACTION; TRANSCRIPTION INITIATION; ANIMAL; BIOLOGICAL MODEL; BIOSYNTHESIS; CHEMISTRY; CHROMATIN; ENHANCER REGION; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; PROMOTER REGION; RAT;

ANIMALS; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; ENHANCER ELEMENTS (GENETICS); MICROCOCCAL NUCLEASE; MODELS, GENETIC; PROMOTER REGIONS (GENETICS); RATS; TRANSCRIPTION, GENETIC; URINARY PLASMINOGEN ACTIVATOR;

EID: 34250344226     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M700867200     Document Type: Article

References (48)

1. Lemon, B., and Tjian, R. (2000) Genes Dev. 14, 2551-2569
2. Li, Q., Harju, S., and Peterson, K. R. (1999) Trends Genet. 15, 403-408
3. Ptashne, M. (1986) Nature 322, 697-701
4. Martin, D. I., Fiering, S., and Groudine, M. (1996) Curr. Opin. Genet. Dev. 6, 488-495
5. Blackwood, E. M., and Kadonaga, J. T. (1998) Science 281, 60-63
6. Bulger, M., and Groudine, M. (1999) Genes Dev. 13, 2465-2477
7. Dorsett, D. (1999) Curr. Opin. Genet. Dev. 9, 505-514
8. Dillon, N., and Sabbattini, P. (2000) BioEssays 22, 657-665
9. Engel, J. D., and Tanimoto, K. (2000) Cell 100, 499-502
10. Hatzis, P., and Talianidis, I. (2002) Mol. Cell 10, 1467-1477
11. Dekker, J., Rippe, K., Dekker, M., and Kleckner, N. (2002) Science 295, 1306-1311
12. Tolhuis, B., Palstra, R. J., Splinter, E., Grosveld, F., and de Laat, W. (2002) Mol. Cell. 10, 1453-1465
13. Carter, D., Chakalova, L., Osborne, C. S., Dai, Y. F., and Fraser, P. (2002) Nat. Genet. 32, 623-626
14. Patrinos, G. P., de Krom, M., de Boer, E., Langeveld, A., Imam, A. M., Strouboulis, J., de Laat, W., and Grosveld, F. G. (2004) Genes Dev. 18, 1495-1509
15. Spilianakis, C. G., and Flavell, R. A. (2004) Nat. Immunol. 5, 1017-1027
16. Mondino, A., and Blasi, F. (2004) Trends Immunol. 25, 450-455
17. Verde, P., Boast, S., Franzè, A., Robbiati, F., and Blasi, F. (1988) Nucleic Acids Res. 16, 10699-10716
18. Ibañez-Tallon, I., Ferrai, C., Longobardi, E., Facetti, I., Blasi, F., and Crippa, M. P. (2002) Blood 100, 3325-3332
19. Helenius, M. A., Saramaki, O. R., Linja, M. J., Tammela, T. L., and Visakorpi, T. (2001) Cancer Res. 61, 5340-5344
20. Benasciutti, E., Pagès, G., Kenzior, O., Folk, W., Blasi, F., and Crippa, M. P. (2004) Blood 104, 256-262
21. Nerlov, C., Rørth, P., Blasi, F., and Johnsen, M. (1991) Oncogene 6, 1583-1592
22. Nerlov, C., De Cesare, D., Pergola, F., Caracciolo, A., Blasi, F., Johnsen, M., and Verde, P. (1992) EMBO J. 11, 4573-4582
23. De Cesare, D., Vallone, D., Caracciolo, A., Sassone-Corsi, P., Nerlov, C., and Verde, P. (1995) Oncogene 11, 365-376
24. De Cesare, D., Palazzolo, M., and Blasi, F. (1996) Oncogene 13, 2551-2562
25. Cirillo, G., Casalino, L., Vallone, D., Caracciolo, A., De Cesare, D., and Verde, P. (1999) Mol. Cell. Biol. 19, 6240-6252
26. Casse, C., Giannoni, F., Nguyen, V. T., Dubois, M. F., and Bensaude, O. (1999) J. Biol. Chem. 274, 16097-16106
27. Orlando, V., Strutt, H., and Paro, R. (1997) Methods 11, 205-214
28. Turner, B. M. (2005) Nat. Struct. Mol. Biol. 12, 110-112
29. Turner, B. M. (2001) Chromatin and Gene Regulation. Molecular Mechanisms in Epigenetics, Blackwell Science Ltd., Oxford, UK
30. van Holde, K. E. (1989) Chromatin, Springer-Verlag, New York
31. Riccio, A., Grimaldi, G., Verde, P., Sebastio, G., Boast, S., and Blasi, F. (1985) Nucleic Acids Res. 13, 2759-2771
32. Nightingale, K. P., O'Neill, L. P., and Turner, B. M. (2006) Curr. Opin. Genet. Dev. 16, 125-136
33. Bustin, M. (1999) Mol. Cell. Biol. 19, 5237-5246
34. Bernstein, B. E., Kamal, M., Lindblad-Toh, K., Bekiranov, S., Bailey, D. K., Huebert, D. J., McMahon, S., Karlsson, E. K., Kulbolas, E. J. I., Gingeras, T. R., Schreiber, S. L., and Lander, E. S. (2005) Cell 120, 169-181
35. Schübeler, D., MacAlpine, D. M., Scalzo, D., Wirbelauer, C., Kooperberg, C., van Leeuwen, F., Gottschling, D. E., O'Neill, L. P., Turner, B. M., Delrow, J., Bell, S. P., and Groudine, M. (2006) Genes Dev. 18, 1263-1271
36. Ibañez-Tallon, I., Caretti, G., Blasi, F., and Crippa, M. P. (1999) Oncogene 18, 2836-2845
37. Nguyen, V. T., Giannoni, F., Dubois, M. F., Seo, S. J., Vigneron, M., Kedinger, C., and Bensaude, O. (1996) Nucleic Acids Res. 24, 2924-2929
38. Chan, H. M., and La Thangue, N. B. (2001) J. Cell Sci. 114, 2363-2373
39. Xiao, H., Hasegawa, T., and Isobe, K. (2000) J. Biol. Chem. 14, 1371-1376
40. Huang, W., Zhao, S., Ammanamanchi, S., Brattain, M., Venkatasubbarao, K., and Freeman, J. W. (2005) J. Biol. Chem. 280, 10047-10054
41. Ross, I. L., Browne, C. M., and Hume, D. A. (1994) Immunol. Cell Biol. 72, 177-185
42. Levsky, J. M., Shenoy, S. M., Pezo, R. C., and Singer, R. H. (2002) Science 297, 836-840
43. Osborne, C. S., Chakalova, L., Brown, K. E., Carter, D., Horton, A., Debrand, E., Goyenechea, B., Mitchell, J. A., Lopes, S., Reik, W., and Fraser, P. (2004) Nat. Genet. 36, 1065-1071
44. Hahn, S. (2004) Nat. Struct. Mol. Biol. 11, 394-403
45. Krumm, A., Meulia, T., Brunvand, M., and Groudine, M. (1992) Genes Dev. 6, 2201-2213
46. Krumm, A., Hickey, L. B., and Groudine, M. (1995) Genes Dev. 9, 559-572
47. Litt, M. D., Simpson, M., Gaszner, M., Allis, C. D., and Felsenfeld, G. (2001) Science 293, 2453-2455
48. Litt, M. D., Simpson, M., Recillas-Targa, F., Prioleau, M. N., and Felsenfeld, G. (2001) EMBO J. 20, 2224-2235