-
1
-
-
0033681250
-
Ordered recruitment of chromatin modifying and general transcription factors to the IFN-β promoter
-
Agalioti T., Lomvardas S., Parekh B., Yie J., Maniatis T., Thanos D. Ordered recruitment of chromatin modifying and general transcription factors to the IFN-β promoter. Cell. 103:2000;667-678.
-
(2000)
Cell
, vol.103
, pp. 667-678
-
-
Agalioti, T.1
Lomvardas, S.2
Parekh, B.3
Yie, J.4
Maniatis, T.5
Thanos, D.6
-
2
-
-
0033969766
-
TAFs revisited: More data reveal new twists and confirm old ideas
-
Albright S.R., Tjian R. TAFs revisited. more data reveal new twists and confirm old ideas Gene. 242:2000;1-13.
-
(2000)
Gene
, vol.242
, pp. 1-13
-
-
Albright, S.R.1
Tjian, R.2
-
3
-
-
0035445820
-
An enhancer element 6 kb upstream of the mouse HNF4alpha1 promoter is activated by glucocorticoids and liver-enriched transcription factors
-
Bailly A., Torres-Padilla M.E., Tinel A.P., Weiss M.C. An enhancer element 6 kb upstream of the mouse HNF4alpha1 promoter is activated by glucocorticoids and liver-enriched transcription factors. Nucleic Acids Res. 29:2001;3495-3505.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3495-3505
-
-
Bailly, A.1
Torres-Padilla, M.E.2
Tinel, A.P.3
Weiss, M.C.4
-
4
-
-
0033540266
-
Regulation of gene expression by multiple forms of TFIID and other novel TAFII-containing complexes
-
Bell B., Tora L. Regulation of gene expression by multiple forms of TFIID and other novel TAFII-containing complexes. Exp. Cell Res. 246:1999;11-19.
-
(1999)
Exp. Cell Res.
, vol.246
, pp. 11-19
-
-
Bell, B.1
Tora, L.2
-
5
-
-
0032479079
-
Going the distance: A current view of enhancer action
-
Blackwood E.M., Kadonaga J.T. Going the distance. a current view of enhancer action Science. 281:1998;61-63.
-
(1998)
Science
, vol.281
, pp. 61-63
-
-
Blackwood, E.M.1
Kadonaga, J.T.2
-
6
-
-
0033215443
-
Looping versus linking: Toward a model for long-distance gene activation
-
Bulger M., Groudine M. Looping versus linking. toward a model for long-distance gene activation Genes Dev. 13:1999;2465-2477.
-
(1999)
Genes Dev.
, vol.13
, pp. 2465-2477
-
-
Bulger, M.1
Groudine, M.2
-
7
-
-
0028148776
-
Disruption of the HNF-4 gene, expressed in visceral endoderm, leads to cell death in embryonic ectoderm and impaired gastrulation of mouse embryos
-
Chen W.S., Manova K., Weinstein D.C., Duncan S.A., Plump A.S., Prezioso V.R., Bachvarova R.F., Darnell J.E. Jr. Disruption of the HNF-4 gene, expressed in visceral endoderm, leads to cell death in embryonic ectoderm and impaired gastrulation of mouse embryos. Genes Dev. 8:1994;2466-2477.
-
(1994)
Genes Dev.
, vol.8
, pp. 2466-2477
-
-
Chen, W.S.1
Manova, K.2
Weinstein, D.C.3
Duncan, S.A.4
Plump, A.S.5
Prezioso, V.R.6
Bachvarova, R.F.7
Darnell J.E., Jr.8
-
8
-
-
0033388099
-
An early developmental transcription factor complex that is more stable on nucleosome core particles than on free DNA
-
Cirillo L.A., Zaret K.S. An early developmental transcription factor complex that is more stable on nucleosome core particles than on free DNA. Mol. Cell. 4:1999;961-969.
-
(1999)
Mol. Cell
, vol.4
, pp. 961-969
-
-
Cirillo, L.A.1
Zaret, K.S.2
-
9
-
-
0036184236
-
Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4
-
Cirillo L.A., Lin F.R., Cuesta I., Friedman D., Jarnik M., Zaret K.S. Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4. Mol. Cell. 9:2002;279-289.
-
(2002)
Mol. Cell
, vol.9
, pp. 279-289
-
-
Cirillo, L.A.1
Lin, F.R.2
Cuesta, I.3
Friedman, D.4
Jarnik, M.5
Zaret, K.S.6
-
10
-
-
0033519641
-
Structure and ligand of a histone acetyltransferase bromodomain
-
Dhalluin C., Carlson J.E., Zeng L., He C., Aggarwal A.K., Zhou M.M. Structure and ligand of a histone acetyltransferase bromodomain. Nature. 399:1999;491-496.
-
(1999)
Nature
, vol.399
, pp. 491-496
-
-
Dhalluin, C.1
Carlson, J.E.2
Zeng, L.3
He, C.4
Aggarwal, A.K.5
Zhou, M.M.6
-
11
-
-
0033936743
-
Functional gene expression domains: Defining the functional unit of eukaryotic gene regulation
-
Dillon N., Sabbattini P. Functional gene expression domains. defining the functional unit of eukaryotic gene regulation Bioessays. 22:2000;657-665.
-
(2000)
Bioessays
, vol.22
, pp. 657-665
-
-
Dillon, N.1
Sabbattini, P.2
-
12
-
-
0031306463
-
The effect of distance on long-range chromatin interactions
-
Dillon N., Trimborn T., Strouboulis J., Fraser P., Grosveld F. The effect of distance on long-range chromatin interactions. Mol. Cell. 1:1997;131-139.
-
(1997)
Mol. Cell
, vol.1
, pp. 131-139
-
-
Dillon, N.1
Trimborn, T.2
Strouboulis, J.3
Fraser, P.4
Grosveld, F.5
-
13
-
-
0032820999
-
Distant liaisons: Long-range enhancer-promoter interactions in Drosophila
-
Dorsett D. Distant liaisons. long-range enhancer-promoter interactions in Drosophila Curr. Opin. Genet. Dev. 9:1999;505-514.
-
(1999)
Curr. Opin. Genet. Dev.
, vol.9
, pp. 505-514
-
-
Dorsett, D.1
-
14
-
-
0032584567
-
Regulation of a transcription factor network required for differentiation and metabolism
-
Duncan S.A., Navas M.A., Dufort D., Rossant J., Stoffel M. Regulation of a transcription factor network required for differentiation and metabolism. Science. 281:1998;692-695.
-
(1998)
Science
, vol.281
, pp. 692-695
-
-
Duncan, S.A.1
Navas, M.A.2
Dufort, D.3
Rossant, J.4
Stoffel, M.5
-
15
-
-
0034598936
-
Looping, linking, and chromatin activity: New insights into β-globin locus regulation
-
Engel J.D., Tanimoto K. Looping, linking, and chromatin activity. new insights into β-globin locus regulation Cell. 100:2000;499-502.
-
(2000)
Cell
, vol.100
, pp. 499-502
-
-
Engel, J.D.1
Tanimoto, K.2
-
16
-
-
0035814925
-
Chromatin remodeling enzymes: Who's on first?
-
Fry C.J., Peterson C.L. Chromatin remodeling enzymes. who's on first? Curr. Biol. 11:2001;185-197.
-
(2001)
Curr. Biol.
, vol.11
, pp. 185-197
-
-
Fry, C.J.1
Peterson, C.L.2
-
17
-
-
0032531694
-
Chromatin interaction mechanism of transcriptional control in vivo
-
Gribnau J., de Boer E., Trimborn T., Wijgerde M., Milot E., Grosveld F., Fraser P. Chromatin interaction mechanism of transcriptional control in vivo. EMBO J. 17:1998;6020-6027.
-
(1998)
EMBO J.
, vol.17
, pp. 6020-6027
-
-
Gribnau, J.1
De Boer, E.2
Trimborn, T.3
Wijgerde, M.4
Milot, E.5
Grosveld, F.6
Fraser, P.7
-
18
-
-
0023663887
-
Position-independent, high-level expression of the human β-globin gene in transgenic mice
-
Grosveld F., van Assendelft G.B., Greaves D.R., Kollias G. Position-independent, high-level expression of the human β-globin gene in transgenic mice. Cell. 51:1987;975-985.
-
(1987)
Cell
, vol.51
, pp. 975-985
-
-
Grosveld, F.1
Van Assendelft, G.B.2
Greaves, D.R.3
Kollias, G.4
-
19
-
-
0035937419
-
Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes
-
Hassan A.H., Neely K.E., Workman J.L. Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes. Cell. 104:2001;817-827.
-
(2001)
Cell
, vol.104
, pp. 817-827
-
-
Hassan, A.H.1
Neely, K.E.2
Workman, J.L.3
-
20
-
-
0034796563
-
Regulatory mechanisms controlling human hepatocyte nuclear factor 4alpha gene expression
-
Hatzis P., Talianidis I. Regulatory mechanisms controlling human hepatocyte nuclear factor 4alpha gene expression. Mol. Cell. Biol. 21:2001;7320-7330.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 7320-7330
-
-
Hatzis, P.1
Talianidis, I.2
-
21
-
-
0035141324
-
Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis
-
Hayhurst G.P., Lee Y.H., Lambert G., Ward J.M., Gonzalez F.J. Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis. Mol. Cell. Biol. 21:2001;1393-1403.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 1393-1403
-
-
Hayhurst, G.P.1
Lee, Y.H.2
Lambert, G.3
Ward, J.M.4
Gonzalez, F.J.5
-
22
-
-
0034717183
-
Structure and function of a human TAFII250 double bromodomain module
-
Jacobson R.H., Ladurner A.G., King D.S., Tjian R. Structure and function of a human TAFII250 double bromodomain module. Science. 288:2000;1422-1425.
-
(2000)
Science
, vol.288
, pp. 1422-1425
-
-
Jacobson, R.H.1
Ladurner, A.G.2
King, D.S.3
Tjian, R.4
-
23
-
-
0034854577
-
Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and downstream promoter
-
Johnson K.D., Christensen H.M., Zhao B., Bresnick E.H. Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and downstream promoter. Mol. Cell. 8:2001;465-471.
-
(2001)
Mol. Cell
, vol.8
, pp. 465-471
-
-
Johnson, K.D.1
Christensen, H.M.2
Zhao, B.3
Bresnick, E.H.4
-
24
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky P., Cho E.J., Buratowski S. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev. 14:2000;2452-2460.
-
(2000)
Genes Dev.
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.J.2
Buratowski, S.3
-
25
-
-
0030848766
-
Modulation of hepatic gene expression by hepatocyte nuclear factor 1
-
Ktistaki E., Talianidis I. Modulation of hepatic gene expression by hepatocyte nuclear factor 1. Science. 277:1997;109-112.
-
(1997)
Science
, vol.277
, pp. 109-112
-
-
Ktistaki, E.1
Talianidis, I.2
-
26
-
-
0028820158
-
Recruitment of hepatocyte nuclear factor 4 into specific intranuclear compartments depends on tyrosine phosphorylation that affects its DNA-binding and transactivation potential
-
Ktistaki E., Ktistakis N.T., Papadogeorgaki E., Talianidis I. Recruitment of hepatocyte nuclear factor 4 into specific intranuclear compartments depends on tyrosine phosphorylation that affects its DNA-binding and transactivation potential. Proc. Natl. Acad. Sci. USA. 92:1995;9876-9880.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 9876-9880
-
-
Ktistaki, E.1
Ktistakis, N.T.2
Papadogeorgaki, E.3
Talianidis, I.4
-
27
-
-
0034667792
-
Orchestrated response: A symphony of transcription factors for gene control
-
Lemon B., Tjian R. Orchestrated response. a symphony of transcription factors for gene control Genes Dev. 14:2000;2551-2569.
-
(2000)
Genes Dev.
, vol.14
, pp. 2551-2569
-
-
Lemon, B.1
Tjian, R.2
-
28
-
-
0033215140
-
Locus control regions: Coming of age at a decade plus
-
Li Q., Harju S., Peterson K.R. Locus control regions. coming of age at a decade plus Trends Genet. 15:1999;403-408.
-
(1999)
Trends Genet.
, vol.15
, pp. 403-408
-
-
Li, Q.1
Harju, S.2
Peterson, K.R.3
-
29
-
-
0034090310
-
Mammalian hepatocyte differentiation requires the transcription factor HNF-4alpha
-
Li J., Ning G., Duncan S.A. Mammalian hepatocyte differentiation requires the transcription factor HNF-4alpha. Genes Dev. 14:2000;464-474.
-
(2000)
Genes Dev.
, vol.14
, pp. 464-474
-
-
Li, J.1
Ning, G.2
Duncan, S.A.3
-
30
-
-
0035929147
-
Nucleosome sliding via TBP DNA binding in vivo
-
Lomvardas S., Thanos D. Nucleosome sliding via TBP DNA binding in vivo. Cell. 106:2001;685-696.
-
(2001)
Cell
, vol.106
, pp. 685-696
-
-
Lomvardas, S.1
Thanos, D.2
-
31
-
-
0037178777
-
Modifying gene expression programs by altering core promoter chromatin architecture
-
Lomvardas S., Thanos D. Modifying gene expression programs by altering core promoter chromatin architecture. Cell. 110:2002;261-271.
-
(2002)
Cell
, vol.110
, pp. 261-271
-
-
Lomvardas, S.1
Thanos, D.2
-
32
-
-
0037007221
-
GAGA can mediate enhancer function in trans by linking two separate DNA molecules
-
Mahmoudi T., Katsani K.R., Verrijzer C.P. GAGA can mediate enhancer function in trans by linking two separate DNA molecules. EMBO J. 21:2002;1775-1781.
-
(2002)
EMBO J.
, vol.21
, pp. 1775-1781
-
-
Mahmoudi, T.1
Katsani, K.R.2
Verrijzer, C.P.3
-
33
-
-
0030219342
-
Regulation of beta-globin gene expression: Straightening out the locus
-
Martin D.I., Fiering S., Groudine M. Regulation of beta-globin gene expression. straightening out the locus Curr. Opin. Genet. Dev. 6:1996;488-495.
-
(1996)
Curr. Opin. Genet. Dev.
, vol.6
, pp. 488-495
-
-
Martin, D.I.1
Fiering, S.2
Groudine, M.3
-
34
-
-
0032533241
-
GATA6 regulates HNF4 and is required for differentiation of visceral endoderm in the mouse embryo
-
Morrisey E.E., Tang Z., Sigrist K., Lu M.M., Jiang F., Ip H.S., Parmacek M.S. GATA6 regulates HNF4 and is required for differentiation of visceral endoderm in the mouse embryo. Genes Dev. 12:1998;3579-3590.
-
(1998)
Genes Dev.
, vol.12
, pp. 3579-3590
-
-
Morrisey, E.E.1
Tang, Z.2
Sigrist, K.3
Lu, M.M.4
Jiang, F.5
Ip, H.S.6
Parmacek, M.S.7
-
35
-
-
0037154963
-
Cooperation between complexes that regulate chromatin structure and transcription
-
Narlikar G.J., Fan H.Y., Kingston R.E. Cooperation between complexes that regulate chromatin structure and transcription. Cell. 108:2002;475-487.
-
(2002)
Cell
, vol.108
, pp. 475-487
-
-
Narlikar, G.J.1
Fan, H.Y.2
Kingston, R.E.3
-
36
-
-
0035839110
-
Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries
-
Noma K., Allis C.D., Grewal S.I. Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries. Science. 293:2001;1150-1155.
-
(2001)
Science
, vol.293
, pp. 1150-1155
-
-
Noma, K.1
Allis, C.D.2
Grewal, S.I.3
-
37
-
-
0024359967
-
The alpha 1-antitrypsin gene is expressed in a human intestinal epithelial cell line
-
Perlmutter D.H., Daniels J.D., Auerbach H.S., De Schryver-Kecskemeti K., Winter H.S., Alpers D.H. The alpha 1-antitrypsin gene is expressed in a human intestinal epithelial cell line. J. Biol. Chem. 264:1989;9485-9490.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 9485-9490
-
-
Perlmutter, D.H.1
Daniels, J.D.2
Auerbach, H.S.3
De Schryver-Kecskemeti, K.4
Winter, H.S.5
Alpers, D.H.6
-
38
-
-
0027209304
-
An in vitro model for the analysis of intestinal brush border assembly. II. Changes in expression and localization of brush border proteins during cell contact-induced brush border assembly in Caco-2BBe cells
-
Peterson M.D., Bement W.M., Mooseker M.S. An in vitro model for the analysis of intestinal brush border assembly. II. Changes in expression and localization of brush border proteins during cell contact-induced brush border assembly in Caco-2BBe cells. J. Cell Sci. 105:1993;461-472.
-
(1993)
J. Cell Sci.
, vol.105
, pp. 461-472
-
-
Peterson, M.D.1
Bement, W.M.2
Mooseker, M.S.3
-
39
-
-
0022447855
-
Gene regulation by proteins acting nearby and at a distance
-
Ptashne M. Gene regulation by proteins acting nearby and at a distance. Nature. 322:1986;697-701.
-
(1986)
Nature
, vol.322
, pp. 697-701
-
-
Ptashne, M.1
-
40
-
-
0033485539
-
Quantitative comparison of DNA looping in vitro and in vivo: Chromatin increases effective DNA flexibility at short distances
-
Ringrose L., Chabanis S., Angrand P.O., Woodroofe C., Stewart A.F. Quantitative comparison of DNA looping in vitro and in vivo. chromatin increases effective DNA flexibility at short distances EMBO J. 18:1999;6630-6641.
-
(1999)
EMBO J.
, vol.18
, pp. 6630-6641
-
-
Ringrose, L.1
Chabanis, S.2
Angrand, P.O.3
Woodroofe, C.4
Stewart, A.F.5
-
41
-
-
0036208492
-
Formation of the androgen receptor transcription complex
-
Shang Y., Myers M., Brown M. Formation of the androgen receptor transcription complex. Mol. Cell. 9:2002;601-610.
-
(2002)
Mol. Cell
, vol.9
, pp. 601-610
-
-
Shang, Y.1
Myers, M.2
Brown, M.3
-
42
-
-
0025690311
-
Liver-enriched transcription factor HNF-4 is a novel member of the steroid hormone receptor superfamily
-
Sladek F.M., Zhong W.M., Lai E., Darnell J.E. Jr. Liver-enriched transcription factor HNF-4 is a novel member of the steroid hormone receptor superfamily. Genes Dev. 4:1990;2353-2365.
-
(1990)
Genes Dev.
, vol.4
, pp. 2353-2365
-
-
Sladek, F.M.1
Zhong, W.M.2
Lai, E.3
Darnell J.E., Jr.4
-
43
-
-
0037040550
-
Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation
-
Soutoglou E., Talianidis I. Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation. Science. 295:2002;1901-1904.
-
(2002)
Science
, vol.295
, pp. 1901-1904
-
-
Soutoglou, E.1
Talianidis, I.2
-
44
-
-
0033636892
-
Acetylation regulates transcription factor activity at multiple levels
-
Soutoglou E., Katrakili N., Talianidis I. Acetylation regulates transcription factor activity at multiple levels. Mol. Cell. 5:2000;745-751.
-
(2000)
Mol. Cell
, vol.5
, pp. 745-751
-
-
Soutoglou, E.1
Katrakili, N.2
Talianidis, I.3
-
45
-
-
0035901512
-
Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity
-
Soutoglou E., Viollet B., Vaxillaire M., Yaniv M., Pontoglio M., Talianidis I. Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity. EMBO J. 20:2001;1984-1992.
-
(2001)
EMBO J.
, vol.20
, pp. 1984-1992
-
-
Soutoglou, E.1
Viollet, B.2
Vaxillaire, M.3
Yaniv, M.4
Pontoglio, M.5
Talianidis, I.6
-
46
-
-
0033601096
-
Putting boundaries on silence
-
Sun F.L., Elgin S.C. Putting boundaries on silence. Cell. 99:1999;459-462.
-
(1999)
Cell
, vol.99
, pp. 459-462
-
-
Sun, F.L.1
Elgin, S.C.2
-
47
-
-
18244394860
-
Mechanism of c-Myb-C/EBP β cooperation from separated sites on a promoter
-
Tahirov T.H., Sato K., Ichikawa-Iwata E., Sasaki M., Inoue-Bungo T., Shiina M., Kimura K., Takata S., Fujikawa A., Morii H.et al. Mechanism of c-Myb-C/EBP β cooperation from separated sites on a promoter. Cell. 108:2002;57-70.
-
(2002)
Cell
, vol.108
, pp. 57-70
-
-
Tahirov, T.H.1
Sato, K.2
Ichikawa-Iwata, E.3
Sasaki, M.4
Inoue-Bungo, T.5
Shiina, M.6
Kimura, K.7
Takata, S.8
Fujikawa, A.9
Morii, H.10
-
48
-
-
0037087628
-
A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription
-
Tora L. A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription. Genes Dev. 16:2002;673-675.
-
(2002)
Genes Dev.
, vol.16
, pp. 673-675
-
-
Tora, L.1
-
49
-
-
0035694922
-
Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase
-
Wang H., Cao R., Xia L., Erdjument-Bromage H., Borchers C., Tempst P., Zhang Y. Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase. Mol. Cell. 8:2001;1207-1217.
-
(2001)
Mol. Cell
, vol.8
, pp. 1207-1217
-
-
Wang, H.1
Cao, R.2
Xia, L.3
Erdjument-Bromage, H.4
Borchers, C.5
Tempst, P.6
Zhang, Y.7
-
50
-
-
0036467996
-
Insulators: Many functions, many mechanisms
-
West A.G., Gaszner M., Felsenfeld G. Insulators. many functions, many mechanisms Genes Dev. 16:2002;271-288.
-
(2002)
Genes Dev.
, vol.16
, pp. 271-288
-
-
West, A.G.1
Gaszner, M.2
Felsenfeld, G.3
-
51
-
-
0027960532
-
Tissue-specific regulation of mouse hepatocyte nuclear factor 4 expression
-
Zhong W., Mirkovitch J., Darnell J.E. Jr. Tissue-specific regulation of mouse hepatocyte nuclear factor 4 expression. Mol. Cell. Biol. 14:1994;7276-7284.
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(1994)
Mol. Cell. Biol.
, vol.14
, pp. 7276-7284
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Zhong, W.1
Mirkovitch, J.2
Darnell J.E., Jr.3
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