Adsorption of genetically engineered proteins studied by time-of-flight secondary ion mass spectrometry (TOF-SIMS). Part A: Data acquisition and principal component analysis (PCA)

Surface and Interface Analysis

Volumn 39, Issue 5, 2007, Pages 419-426

  Suzuki, Noriaki ^a   Gamble, Lara ^b   Tamerler, Candan ^c   Sarikaya, Mehmet ^a   Castner, David G ^a,b   Ohuchi, Fumio S ^a  

^a University of Washington   (United States)

^b University of Washington   (United States)

^c ISTANBUL TECHNICAL UNIVERSITY   (Turkey)

Author keywords

GBP; Genetically engineered proteins; GEPIs; PCA; TOF SIMS

Indexed keywords

ADSORPTION; AMINO ACIDS; DATA ACQUISITION; POLYPEPTIDES; PRINCIPAL COMPONENT ANALYSIS; SECONDARY ION MASS SPECTROMETRY;

COMBINATORIAL BIOLOGY SELECTION PROTOCOLS; GENETICALLY ENGINEERED PROTEINS; GOLD BINDING PROTEINS (GBP); TIME OF FLIGHT (TOF);

PROTEINS;

EID: 34247501844     PISSN: 01422421     EISSN: 10969918     Source Type: Journal    
DOI: 10.1002/sia.2536     Document Type: Article

References (49)

1. Bains W. Biotechnology, Oxford University Press: New York, 1993.
2. LeDuc PR, Ostuni E, Whitesides G, Ingber D. Methods Cell Biol. 2002; 69: 385.
3. Woodbury RG, Wendin C, Clendenning G, et al. Bioelectron. 1998; 13: 1117.
4. Ren L, He J, Zhang S, Evans DG, Duan X. J. Mol. Catal. Enzym. 2002; 18(1-3): 11.
5. Tsapis N, Bennett D, Jackson B, Weitz DA, Edwards DA. Proc. Natl. Acad. Sci. USA 2002; 99(19): 12001.
6. Zhang RJ, Regnier FA. J. Proteome Res. 2002; 1(2): 139.
7. Hancock WS, Wu SL, Stanley RA. Genet. Eng. News 2002; 22(16): 3.
8. Issaq HJ, Conrads TP, Janini GM, Veenstra TD. Electrophoresis 2002; 23(17): 3048.
9. Bail P. Nature 2001; 409: 413.
10. Ferry DK, Goodnick SM. Transport in Nanostructures. Cambridge University Press: Cambridge, 1997.
11. Harris PJ. Carbon Nanotubes and Related Structures. Cambridge University Press: Cambridge, 1999.
12. Bachtold A, Hadley P, Nakanishi T, Dekker C. Science 2001; 294: 1317.
13. Lowenstam HA, Weiner A. On Biomineralization. Oxford University Press: Oxford, 1989.
14. Sarikaya M. Proc Natl Acad Sci. U.S.A. 1999; 96: 14183.
15. Smith GP. Science 1985; 228: 1315.
16. Wittrup KD. Curr. Opin. Biotechnol. 2001; 12: 395.
17. Sarikaya M, Tamerler C, Jen AY, Schulten K, Baneyx F. Nat. Mater. 2003; 2: 577.
18. Brown S. Nat. Biotechnol. 1997; 15: 269.
19. Whaley SR, English DS, Hu EL, Barbara PF, Belcher AM. Nature 2000; 405: 665.
20. Gaskin DJH, Strack K, Vulfson EN. Biotechnol. Lett. 2000; 22: 1211.
21. Niemeyer CM. Angew. Chem. Int. Ed. Engl. 2001; 40: 4128.
22. Brown S, Sarikaya M, Johnson E. J. Mol. Biol. 2000; 299: 725.
23. Sarikaya M, Tamerler C, Schwartz DT, Baneyx F. Annu. Rev. Mater. Res. 2004; 34: 378.
24. Schonbrun J, Wedemeyer WJ, Baker D. Curr. Opin. Struct. Biol. 2002; 12: 348.
25. Tamerler C, Dincer S, Heidel D, Zareie MH, Sarikaya M. Prog. Org. Coat. 2003; 47.
26. Braun R, Sarikaya M, Schulten K. J. Biomater. Sci. Polym. Ed. 2001; 13(7): 747.
27. Whitesides GM, Mathias JP, Seto CT. Science 1991; 254: 1312.
28. Ulman A. Self-assembled Monolayers of Thiols. Academic: San Diego, CA, 1998.
29. Wagner MS, Tyler BJ, Castner DG. Anal. Chem. 2002; 74: 1824.
30. Wagner MS, Castner DG. Appl. Surf. Sci. 2003; 203-204: 698.
31. Samuel NT, Castner DG. Appl. Surf. Sci. 2004; 231-232: 397.
32. Wagner MS, Graham DJ, Ratner BD, Castner DG. Surf. Sci. 2004; 570: 78.
33. Wagner MS, Castner DG. Appl. Surf. Sci. 2004; 231-232: 366.
34. Vanden Eynde X, Betrand P. Surf. Interface Anal. 1997; 25: 878.
35. Wenig LT, Bertrand P, Lauer W, Zimmer R, Busetti S. Surf. Interface Anal. 1995; 23: 879.
36. Vanden Eynde X, Bertrand P, Jerome R. Macromolecules 1997; 30: 6407.
37. Vickerman JC, Briggs D. TOF-SIMS Surface Analysis by Mass Spectrometry (1st edn). IM publications, and Surface Spectra Limited: Chichester, 2001; Chapt. 5.
38. Wagner MS, Castner DG. Langmuir 2001; 17: 4649.
39. Mantus DS, Ratner B. Anal. Chem. 1993; 65: 1431.
40. Wagner MS, McArthur SL, Shen M, Horbett TA, Castner DG. J. Biomater. Sci. Polym. Ed. 2002; 13(4): 407.
41. Jackson JE. A User's Guide to Principal Components. Wiley: New York, 1991.
42. Coullerez G, Leonard D, Lundmark S, Mathieu HJ. Surf. Interface Anal. 2000; 29: 431.
43. Vanden-Eynde X, Bertrand P. Surf. Interface Anal. 1997; 25: 878.
44. Graham DJ, Price DD, Ratner BD. Langmuir 2002; 18: 1518.
45. Lu HB, Campbell CT, Graham DJ, Ratner BD. Anal. Chem. 2000; 72: 2886.
46. Michaud D, Baril M, Perrault G. Air Waste: J. Air Waste Manage. Assoc. 1993; 43: 729.
47. Prudon G, Dupuy JC, Bonneau M, Vandroux L, Dubois C, Gautier B, Vallard JP, Delmas J, Warren P, Dutartre D. Proceedings of the SIMS X. Munster, Wiley: New York, 1995; 687.
48. Dong G, Chao Q, Yizheng Z, Liangzhen C, Desse F, Schuhmacher M. Proceedings of the SIMS XII, Elsevier, Brussels, 1999; 711.
49. Kulp-III JL, Sarikaya M, Evans JS. J. Mater. Chem. 2004; 14: 2325.