Canid genomics: Mapping genes for behavior in the silver fox

Genome Research

Volumn 17, Issue 3, 2007, Pages 259-263

  Spady, Tyrone C ^a   Ostrander, Elaine A ^a  

^a NATIONAL HUMAN GENOME RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL BEHAVIOR; GENE MAPPING; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC LINKAGE; HOMOZYGOSITY; NONHUMAN; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; REVIEW;

ANIMALS; ANIMALS, DOMESTIC; BEHAVIOR, ANIMAL; BREEDING; CHROMOSOME MAPPING; FOXES; GENOMICS;

ANIMALIA; ARMADILLO; CANIDAE; CANIS FAMILIARIS; DIDELPHIDAE; EQUIDAE; ERINACEIDAE; LEMUR; MAMMALIA; ORYCTOLAGUS CUNICULUS; RATTUS; SCIURIDAE; TUPAIIDAE; VULPES VULPES;

EID: 33847714149     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.6055807     Document Type: Review

References (34)

1. Belyaev, D.K. 1969. Domestication of animals. Science 5: 47-52.
2. Belyaev, D.K. 1979. Destabilizing selection as a factor in domestication. J. Hered. 70: 301-308.
3. Breen, M., Hitte, C., Lorentzen, T.D., Thomas, R., Cadieu, E., Sabacan, L., Scott, A., Evanno, G., Parker, H.G., Kirkness, E., et al. 2004. An integrated 4249 marker FISH/RH map of the canine genome. BMC Genomics 5: 1-11.
4. Clark, L.A., Tsai, K.L., Steiner, J.M., Williams, D.A., Guerra, T., Ostrander, E.A., Galibert, F., and Murphy, K.E. 2004. Chromosome-specific microsatellite multiplex sets for linkage studies in the domestic dog. Genomics 84: 550-554.
5. Clutton-Brock, J. 1995. The domestic dog, its evolution, behavior and interactions with people. CUP, Cambridge. UK.
6. Graphodatsky, A.S., Beklemisheva, V.R., and Dolf, G. 1995. High-resolution GTG-banding patterns of dog and silver fox: Description and comparative analysis. Cytogenet. Cell Genet. 69: 226-231.
7. Graphodatsky, A.S., Kukekova, A.V., Yudkin, D.V., Trifonov, V.A., Vorobieva, N.V., Beklemisheva, V.R., Perelman, P.L., Graphodatskaya, D.A., Trut, L.N., Yang, F., et al. 2005. The proto-oncogene C-KIT maps to canid B-chromosomes. Chromosome Res. 13: 113-122.
8. Guyon, R., Lorentzen, T.D., Hitte, C., Kim, L., Cadieu, E., Parker, H.G., Quignon, P., Lowe, J.K., Renier, C., Gelfenbeyn, B., et al. 2003. A 1-Mb resolution radiation hybrid map of the canine genome. Proc. Natl. Acad. Sci. 100: 5296-5301.
9. Hare, B., Brown, M., Williamson, C., and Tomasello, M. 2002. The domestication of social cognition in dogs. Science 298: 1634-1636.
10. Hare, B., Plyusnina, I., Ignacio, N., Schepina, O., Stepika, A., Wrangham, R., and Trut, L. 2005. Social cognitive evolution in captive foxes is a correlated by-product of experimental domestication. Curr. Biol. 15: 226-230.
11. Hitte, C., Madeoy, J., Kirkness, E.F., Priat, C., Lorentzen, T.D., Senger, F., Thomas, D., Derrien, T., Ramirez, C., Scott, C., et al. 2005. Facilitating genome navigation: Survey sequencing and dense radiation-hybrid gene mapping. Nat. Rev. Genet. 6: 643-648.
12. Ho, S.Y. and Larson, G. 2006. Molecular clocks: When times are a-changin'. Trends Genet. 22: 79-83.
13. Ho, S.Y., Phillips, M.J., Cooper, A., and Drummond, A.J. 2005. Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Mol. Biol. Evol. 22: 1561-1568.
14. Holzwarth, J.A., Middleton, R.P., Roberts, M., Mansourian, R., Raymond, F., and Hannah, S.S. 2005. The development of a high-density canine microarray. J. Hered. 96: 817-820.
15. Kirkness, E.F., Bafna, V., Halpern, A.L., Levy, S., Remington, K., Rusch, D.B., Delcher, A.L., Pop, M., Wang, W., Fraser, C.M., et al. 2003. The dog genome: Survey sequencing and comparative analysis. Science 301: 1898-1903.
16. Kukekova, A.V., Trut, L.N., Oskina, I.N., Kharlamova, A.V., Shikhevich, S.G., Kirkness, E.F., Aguirre, G.D., and Acland, G.M. 2004. A marker set for construction of a genetic map of the silver fox (Vulpes vulpes). J. Hered. 95: 185-194.
17. Kukekova, A.V., Acland, G.M., Oskina, I.N., Kharlamova, A.V., Trut, L.N., Chase, K., Lark, K.G., Erb, H.N., and Aguirre, G.D. 2006. The genetics of domesticated behavior in canids: What can dogs and silver foxes tell us about each other. In The dog and it's genome (eds. E.A. Ostrander et al.), pp. 515-537. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
18. Kukekova, A.V., Trut, L.N., Oskina, I.N., Johnson, J.L., Temnykh, S.V., Kharlamova, A.V., Shepeleva, D.V., Gulievich, R.G., Shikhevich, S.G., Graphodatsky, A.S., et al. 2007. A meiotic linkage map of the silver fox. Genome Res. (this issue).
19. Lindberg, J., Bjornerfeldt, S., Saetre, P., Svartberg, K., Seehuus, B., Bakken, M., Vila, C., and Jazin, E. 2005. Selection for tameness has changed brain gene expression in silver foxes. Curr. Biol. 15: R915-R916.
20. Lindblad-Toh, K.C.M., Wade, T.S., Mikkelsen, E.K., Karlsson, D.B., Jaffe, M., Kamal, M., Clamp, J.L., Chang, E.J., Kulbokas 3rd, M.C., Zody, E., et al. 2005. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature 438: 803-819.
21. Mellersh, C.S., Langston, A.A., Acland, G.M., Fleming, M.A., Ray, K., Wiegand, N.A., Francisco, L.V., Gibbs, M., Aguirre, G.D., and Ostrander, E.A. 1997. A linkage map of the canine genome. Genomics 46: 326-336.
22. Murphy, W.J., Larkin, D.M., Everts-van der Wind, A., Bourque, G., Tesler, G., Auvil, L., Beever, J.E., Chowdhary, B.P., Galibert, F., Gatzke, L., et al. 2005. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science 309: 613-617.
23. Neff, M.W., Broman, K.W., Mellersh, C.S., Ray, K., Acland, G.M., Aguirre, G.D., Ziegle, J.S., Ostrander, E.A., and Rine, J. 1999. A second-generation genetic linkage map of the domestic dog, Canis familiaris. Genetics 151: 803-820.
24. Price, E.O. 1984. Behavioral aspects of animal domestication. Q. Rev. Biol. 59: 1-32.
25. Sablin, M.V. and Khlopachev, G.A. 2002. The earliest ice age dogs: Evidence from Eliseevichi 1. Curr. Anthropol. 43: 795-798.
26. Savolainen, P., Zhang, Y.P., Luo, J., Lundeberg, J., and Leitner, T. 2002. Genetic evidence for an East Asian origin of domestic dogs. Science 298: 1610-1613.
27. Thomson, S.A., Kennerly, E., Olby, N., Mickelson, J.R., Hoffmann, D.E., Dickinson, P.J., Gibson, G., and Breen, M. 2005. Microarray analysis of differentially expressed genes of primary tumors in the canine central nervous system. Vet. Pathol. 42: 550-558.
28. Trut, L.N. 1999. Early canid domestication: The farm-fox experiment. Am. Sci. 87: 160-169.
29. Trut, L.N. 2001. Experimental studies in early canid domestication. In The genetics of the dog (eds. A. Ruvinsky and J. Sampson), pp. 15-41. CABI Publishing, New York.
30. Vila, C., Savolainen, P., Maldonado, J.E., Amorim, I.R., Rice, J.E., Honeycutt, R.L., Crandall, K.A., Lundeberg, J., and Wayne, R.K. 1997. Multiple and ancient origins of the domestic dog. [see comments] Science 276: 1687-1689.
31. Vila, C., Amorim, I.R., Leonard, J.A., Posada, D., Castroviejo, J., Petrucci-Fonseca, F., Crandall, K.A., Ellegren, H., and Wayne, R.K. 1999a. Mitochondrial DNA phylogeography and population history of the grey wolf Canis lupus. Mol. Ecol. 8: 2089-2103.
32. Vila, C., Maldonado, J.E., and Wayne, R.K. 1999b. Phylogenetic relationships, evolution, and genetic diversity of the domestic dog. J. Hered. 90: 71-77.
33. Wayne, R.K., Geffen, E., Girman, D.J., Koeppfli, K.P., Lau, L.M., and Marshall, C.R. 1997. Molecular systematics of the Canidae. Syst. Biol. 46: 622-653.
34. Yang, F., O'Brien, P.C., Milne, B.S., Graphodatsky, A.S., Solanky, N., Trifonov, V., Rens, W., Sargan, D., and Ferguson-Smith, M.A. 1999. A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps. Genomics 62: 189-202.