Microarray analysis of differentially expressed genes of primary tumors in the canine central nervous system

Veterinary Pathology

Volumn 42, Issue 5, 2005, Pages 550-558

  Thomson, S A M ^a   Kennerly, E ^a   Olby, N ^a   Mickelson, J R ^b   Hoffmann, D E ^b   Dickinson, P J ^c   Gibson, G ^a   Breen, M ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Canine choroid plexus tumor; cDNA microarray; Ependymoma; Glial tumor; Meningioma

Indexed keywords

ANIMAL; ANIMAL DISEASE; ARTICLE; ASTROCYTOMA; BRAIN TUMOR; DNA MICROARRAY; DOG; DOG DISEASE; EPENDYMOMA; FEMALE; GENE EXPRESSION REGULATION; GENETICS; GLIOBLASTOMA; MALE; MENINGIOMA; OLIGODENDROGLIOMA; PAPILLOMA;

ANIMALS; ASTROCYTOMA; BRAIN NEOPLASMS; DOG DISEASES; DOGS; EPENDYMOMA; FEMALE; GENE EXPRESSION REGULATION, NEOPLASTIC; GLIOBLASTOMA; MALE; MENINGEAL NEOPLASMS; MENINGIOMA; OLIGODENDROGLIOMA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PAPILLOMA;

CANIS FAMILIARIS; CANIS LUPUS;

EID: 24644472063     PISSN: 03009858     EISSN: 03009858     Source Type: Journal    
DOI: 10.1354/vp.42-5-550     Document Type: Article

References (33)

1. Barnhart KF, Wojcieszyn J, Storts RW: Immunohistochemical staining patterns of canine meningiomas and correlation with published immunophenotypes. Vet Pathol 39:311-321, 2002
2. Cantile C, Campani D, Menicagli M, Arispici M: Pathological and immunohistochemical studies of choroid plexus carcinoma of the dog. J Comp Pathol 126:183-193, 2002
3. Deng Y, Yao L, Chau L, Ng SS, Peng Y, Liu X, Au WS, Wang J, Li F, Ji S, Han H, Nie X, Li Q, Kung HF, Leung SY, Lin MC: N-Myc downstream-regulated gene 2 (NDRG2) inhibits glioblastoma cell proliferation. Int J Cancer 106:342-347, 2003
4. Di Bacco A, Gill G: The secreted glycoprotein CREG inhibits cell growth dependent on the mannose-6-phosphate/insulin-like growth factor II receptor. Oncogene 22:5436-5445, 2003
5. Fathallah-Shaykh HM, He B, Zhao LJ, Engelhard HH, Cerullo L, Lichtor T, Byrne R, Munoz L, Von Roenn K, Rosseau GL, Glick R, Sherman C, Farooq K: Genomic expression discovery predicts pathways and opposing functions behind phenotypes. J Biol Chem 278:23830-23833, 2003
6. Guyon R, Lorentzen TD, Hitte C, Kim L, Cadieu E, Parker HG, Quignon P, Lowe JK, Renier C, Gelfenbeyn B, Vignaux F, DeFrance HB, Gloux S, Mahairas GG, Andre C, Galibert F, Ostrander EA: A 1-Mb resolution radiation hybrid map of the canine genome. Proc Natl Acad Sci USA 100:5296-5301, 2003
7. Hansen K, Khanna C: Spontaneous and genetically engineered animal models; use in preclinical cancer drug development. Eur J Cancer 40:858-880, 2004
8. Higgins RJ, LeCouteur RA, Vernau KM, Sturges BK, Obradovich JE, Bollen AW: Granular cell tumor of the canine central nervous system: two cases. Vet Pathol 38:620-627, 2001
9. Hunter S, Young A, Olson J, Brat DJ, Bowers G, Wilcox JN, Jaye D, Mendrinos S, Neish A: Differential expression between pilocytic and anaplastic astrocytomas: identification of apolipoprotein D as a marker for lowgrade, non-infiltrating primary CNS neoplasms. J Neuropathol Exp Neurol 61:275-281, 2002
10. Jin W, Riley RM, Wolfinger RD, White KP, Passador-Gurgel G, Gibson G: The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster. Nat Genet 29:389-395, 2001
11. Kennerly E, Thomson S, Olby N, Breen M, Gibson G: Comparison of regional gene expression differences in the brain of the domestic dog and human. Human Genomics, 2004 (in press)
12. Kepes JJ: Presidential address: the histopathology of meningiomas. A reflection of origins and expected behavior? J Neuropathol Exp Neurol 45:95-107, 1986
13. Khanna C, Wan X, Bose S, Cassaday R, Olomu O, Mendoza A, Yeung C, Gorlick R, Hewitt SM, Helman LJ: The membrane-cytoskeleton linker ezrin is necessary for osteosarcoma metastasis. Nat Med 10:182-186, 2004
14. Kirkness EF, Bafna V, Halpern AL, Levy S, Remington K, Rusch DB, Delcher AL, Pop M, Wang W, Fraser CM, Venter JC: The dog genome: survey sequencing and comparative analysis. Science 301:1898-1903, 2003
15. Koestner A, Bilzer T, Fatzer R, Schulman FY, Summers BA, Van Winkle TJ: Histological classification of tumors of the nervous system of domestic animals, pp. 27-29. Armed Forces Institute of Pathology, World Health Organization, Washington, DC, 1999
16. Krinke G, Naylor DC, Schmid S, Frohlich E, Schnider K: The incidence of naturally-occurring primary brain tumours in the laboratory rat. J Comp Pathol 95:175-192, 1985
17. Lantos PL, Vandenberg SR, Kleihues P: Greenfield's Neuropathology, 6th ed., vol. 2, pp. 647-653. Edward Arnold, London, 1997
18. Lingaas F, Comstock KE, Kirkness EF, Sorensen A, Aarskaug T, Hitte C, Nickerson ML, Moe L, Schmidt LS, Thomas R, Breen M, Galibert F, Zbar B, Ostrander EA: A mutation in the canine BHD gene is associated with hereditary multifocal renal cystadenocarcinoma and nodular dermatofibrosis in the German Shepherd dog. Hum Mol Genet 12:3043-3053, 2003
19. Lipsitz D, Higgins RJ, Kortz GD, Dickinson PJ, Bollen AW, Naydan DK, LeCouteur RA: Glioblastoma multiforme: clinical findings, magnetic resonance imaging, and pathology in five dogs. Vet Pathol 40:659-669, 2003
20. Livak KJ, Schmittgen TD: Analysis of relative gene expression data using real-time quantitative PCR and the 2(2Delta Delta C(T)) method. Methods 25:402-408,2001
21. Ljubimova JY, Lakhter AJ, Loksh A, Yong WH, Riedinger MS, Miner JH, Sorokin LM, Ljubimov AV, Black KL: Overexpression of alpha4 chain-containing laminins in human glial tumors identified by gene microarray analysis. Cancer Res 61:5601-5610, 2001
22. Louis DN, Scheithauer BW, Budka H, von Deimling A, Kepes JJ: Pathology & Genetics: Tumours of the Nervous System, 2nd ed., pp. 176-184. International Agency for Research on Cancer, Lyon, France, 2000
23. Patnaik AK, Kay WJ, Hurvitz AI: Intracranial meningioma: a comparative pathologic study of 28 dogs. Vet Pathol 23:369-373, 1986
24. Qu X, Zhai Y, Wei H, Zhang C, Xing G, Yu Y, He F: Characterization and expression of three novel differentiation-related genes belong to the human NDRG gene family. Mol Cell Biochem 229:35-44, 2002
25. Roberts MC, Hitte CC, Hendrickson JA, Hoffmann DE, Flickinger GH, Rutherford MS, Guyon RS, Galibert FS, Mickelson JR: Characterization and radiation hybrid mapping of expressed sequence tags from the canine brain. Mamm Genome 14:203-213, 2003
26. Stoica G, Kim HT, Hall DG, Coates JR: Morphology, immunohistochemistry, and genetic alterations in dog astrocytomas. Vet Pathol 41:10-19, 2004
27. Storey JD, Tibshirani R: Statistical significance for genomewide studies. Proc Natl Acad Sci USA 100:9440-9445, 2003
28. Summers BA, Cummings JF, de Lahunta A: Veterinary Neuropathology, pp. 362-373. Mosby, St. Louis, MO, 1995
29. Thomas R, Bridge W, Benke K, Breen M: Isolation and chromosomal assignment of canine genomic BAC clones representing 25 cancer-related genes. Cytogenet Genome Res 102:249-253, 2003
30. Veal E, Groisman R, Eisenstein M, Gill G: The secreted glycoprotein CREG enhances differentiation of NTERA-2 human embryonal carcinoma cells. Oncogene 19:2120-2128, 2000
31. Watson MA, Gutmann DH, Peterson K, Chicoine MR, Kleinschmidt-DeMasters BK, Brown HG, Perry A: Molecular characterization of human meningiomas by gene expression profiling using high-density oligonucleotide microarrays. Am J Pathol 161:665-672, 2002
32. Wolfinger RD, Kass RE: Nonconjugate Bayesian analysis of variance component models. Biometrics 56:768-774, 2000
33. Yoshida T, Mitsumori K, Harada T, Maita K: Morphological and ultrastructural study of the histogenesis of meningeal granular cell tumors in rats. Toxicol Pathol 25:211-216, 1997