A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps

Genomics

Volumn 62, Issue 2, 1999, Pages 189-202

  Yang, F ^a   O'Brien, P C M ^a   Milne, B S ^a   Graphodatsky, A S ^b   Solanky, N ^a   Trifonov, V ^b   Rens, W ^a   Sargan, D ^a   Ferguson Smith, M A ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b INSTITUTE OF CYTOLOGY AND GENETICS   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; CHROMOSOME ANALYSIS; DOG; FOX; GENE MAPPING; GENE REARRANGEMENT; GENETIC LINKAGE; GENETIC MARKER; GENOTYPE; HUMAN; HUMAN CELL; KARYOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SPECIES DIFFERENTIATION;

EID: 0033373189     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1999.5989     Document Type: Article

References (49)

1. Chowdhary B. P., Raudsepp T., Fronicke L., Scherthan H. Emerging patterns of comparative genome organization in some mammalian species as revealed by Zoo-FISH. Genome Res. 8:1998;577-589.
2. Hereditas. 103:1985;171-176.
3. Copeland N. G., Jenkins N. A., Gilbert D. J., Eppig J. T., Maltais L. J., Miller J. C., Dietrich W. F., Weaver A., Lincoln S. E., Steen R. G., Stein L. D., Nadeau J. H., Lander E. S. A genetic linkage map of the mouse: Current applications and future prospects. Science. 262:1993;57-66.
4. Deschenes S. M., Puck J. M., Dutra A. S., Somberg R. L., Felsburg P. J., Henthorn P. S. Comparative mapping of canine and human proximal Xq and genetic analysis of canine X-linked severe combined immunodeficiency. Genomics. 23:1994;62-68.
5. Dixkens C., Klett C., Bruch J., Kollak A., Serov O. L., Zhdanova N., Vogel W., Hameister H. ZOO-FISH analysis in insectivores: Evolution extols the virtue of the status quo. Cytogenet. Cell Genet. 80:1998;61-67.
6. Dolf G., Schläpfer J., Parfitt C., Schelling C., Zajac M., Switonski M., Ladon D. Assignment of the canine microsatellite CanBern1 to canine chromosome 13q21. Anim. Genet. 28:1997;156-157.
7. Dutra A. S., Mignot E., Puck J. M. Gene localization and syntenic mapping by FISH in the dog. Cytogenet. Cell Genet. 74:1996;113-117.
8. Dutrillaux B., Couturier J. The ancestral karyotype of Carnivora: Comparison with that of platyrrhine monkeys. Cytogenet. Cell Genet. 35:1993;200-208.
9. Ferguson-Smith M. A. Genetic analysis by chromosome sorting and painting: Phylogenetic and diagnostic applications. Eur. J. Hum. Genet. 5:1997;253-265.
10. Ferguson-Smith M. A., Yang F., O'Brien P. C. M. Comparative mapping using chromosome sorting and painting. ILAR J. 39:1998;68-76.
11. Francisco L. V., Langston A. A., Mellersh C. S., Neal C. L., Ostrander E. A. A class of highly polymorphic tetranucleotide repeats for canine genetic mapping. Mamm. Genome. 7:1996;359-362.
12. Ganjam K. K., Shibuya H., Stoy S. J., Liu P. C., Ganjam V. K., Katz M. L., Johnson G. S. A BstUI PCR/RFLP marker in an intron of the canine fibrillin 1 gene. Anim. Genet. 29:1998;240-241.
13. Graphodatsky A. S., Beklemisheva V. R., Dolf G. High resolution GTG-banding patterns of dog and silver fox chromosomes: Description and comparative analysis. Cytogenet. Cell Genet. 69:1995;226-231.
14. Graphodatsky A. S., Radjabli S. I. Comparative cytogenetics of three canids species. Genetica. 17:1981;1498-1504.
15. Guevara-Fujita M. L., Loechel R., Venta P. J., Yuzbasiyan-Gurkan V., Brewer G. J. Chromosomal assignment of seven genes on canine chromosomes by fluorescence in situ hybridization. Mamm. Genome. 7:1996;268-270.
16. Hameister H., Klett C., Bruch J., Dixkens C., Vogel W., Christensen K. Zoo-FISH analysis: The American mink (Mustela vision) closely resembles the cat karyotype. Chromosome Res. 5:1997;5-11.
17. Iannuzzi L., Di Meo G. P., Perucatti A., Bardaro T. Zoo-FISH and R-banding reveal extensive conservation of human chromosome regions in euchromatic regions of river buffalo chromosomes. Cytogenet. Cell Genet. 82:1998;210-214.
18. Korstanje, R, O'Brien, P. C. M, Yang, F, Rens, W, Bosma, A. A, van Lith, H. A, van Zutphen, L. F. M, and, Ferguson-Smith, M. A. Complete homology maps of the rabbit (Oryctolagus cuniculus) and human by reciprocal chromosome painting, Cytogenet. Cell Genet,in press.
19. Langford C. F., Fischer P. E., Binns M. M., Holmes N. G., Carter N. P. Chromosome-specific paints from a high resolution flow-karyotype of the dog. Chromosome Res. 4:1996;115-123.
20. Lingaas F., Sorensen A., Juneja R. K., Johansson S., Fredholm M., Wintero A. K., Sampson J., Mellersh C., Curzon A., Holmes N. G., Binns M. M., Dickens H. F., Ryder E. J., Gerlach J., Baumle E., Dolf G. Towards construction of a canine linkage map: Establishment of 16 linkage groups. Mamm. Genome. 8:1997;218-221.
21. Mellersh C. S., Langston A. A., Acland G. M., Fleming M. A., Ray K., Wiegand N. A., Francisco L. V., Gibbs M., Aguirre G. D., Ostrander E. A. A linkage map of the canine genome. Genomics. 46:1997;326-336.
22. Meyers-Wallen V. N., Schlafer D., Barr I., Lovell-Badge R., Keyzner A. Sry-negative XX sex reversal in purebred dogs. Mol. Reprod. Dev. 53:1999;266-273.
23. Nash W. G., O'Brien S. J. Conserved regions of homologous G-banding chromosomes between orders in mammalian evolution: Carnivores and primates. Proc. Natl. Acad. Sci. USA. 79:1982;6631-6635.
24. Nash W. G., O'Brien S. J. A comparative chromosome banding analysis of the Ursidae and their relationship to other carnivores. Cytogenet. Cell Genet. 45:1987;206-212.
25. Nash W. G., Wienberg J., Ferguson-Smith M. A., Menninger J. C., O'Brien S. J. Comparative genomics: Tracking chromosome evolution in the family Ursidae using reciprocal chromosome painting. Cytogenet. Cell Genet. 83:1998;182-192.
26. Neff M. W., Broman K. W., Mellersh C. S., Ray K., Acland G. M., Aguirre G. D., Ziegle J. S., Ostrander E. A., Rine J. A second generation genetic linkage map of the domestic dog, Canis familiaris. Genetics. 151:1999;803-820.
27. Ostrander E. A., Giniger E. Semper fidelis: What man's best friend can teach us about human biology and disease. Am. J. Hum. Genet. 61:1997;475-480.
28. Ostrander E. A., Mapa F. A., Yee M., Rine J. One hundred and one simple sequence repeat-based markers for the canine genome. Mamm. Genome. 6:1995;192-195.
29. n markers for genetic mapping in dog. Genomics. 16:1993;207-213.
30. Priat C., Hitte C., Vignaux F., Renier C., Jiang Z. H., Jouquand S., Chéron A., André C., Galibert F. A whole genome radiation hybrid map of the dog genome. Genomics. 54:1998;361-378.
31. Raudsepp T., Fronicke L., Scherthan H., Gustavsson I., Chowdhary B. P. Zoo-FISH delineates conserved chromosomal segments in horse and man. Chromosome Res. 4:1996;218-225.
32. Reimann N., Bartnitzke S., Bullerdiek J., Schmitz U., Rogalla P., Nolte I., Ronne M. An extended nomenclature of the canine karyotype. Cytogenet. Cell Genet. 73:1996;140-144.
33. Rettenberger G., Klett C., Zechner U., Kunz J., Vogel W., Hameister H. Visualization of the conservation of synteny between humans and pigs by heterologous chromosomal painting. Genomics. 26:1995;372-378.
34. Rettenberger G., Klett C., Zechner U., Bruch J., Just W., Vogel W., Hameister H. ZOO-FISH analysis: Cat and human karyotypes closely resemble the putative ancestral mammalian karyotype. Chromosome Res. 3:1996;479-486.
35. Rubtsov N. B. The fox gene map. ILAR J. 39:1998;92-95.
36. Rubtsov N., Graphodatsky A., Matveeva V. G., Radjabli S. I., Nesterova T. B., Kulbakina N. A., Zakian S. Silver fox gene mapping: Conserved chromosome regions in the order Carnivora. Cytogenet. Cell Genet. 48:1988;95-98.
37. Scherthan H., Cremer T., Arnason U., Weier H. U., Lima-de-Faria A., Fronicke L. Comparative chromosome painting discloses homologous segments in distantly related mammals. Nat. Genet. 6:1994;342-347.
38. Solinas-Toldo S., Lengauer C., Fries R. Comparative genome map of human and cattle. Genomics. 27:1995;489-496.
39. Switonski M., Reimann N., Bosma A. A., Long S., Bartnitzke S., Pienkowska A., Moreno-Milan M. M., Fischer P. Report on the progress of standardization of the G-banded canine (Canis familiaris) karyotype. Chromosome Res. 4:1996;306-309.
40. Telenius H., Pelmear A. H., Tunnacliffe A., Carter N. P., Behmel A., Ferguson-Smith M. A., Nordenskjold M., Pfragner R., Ponder B. A. Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes. Genes Chromosomes Cancer. 4:1992;2576-2263.
41. Verma R., Babu A. Human Chromosomes: Principles and Techniques. 1995;McGraw-Hill, New York.
42. Wayne R. K. Molecular evolution of the dog family. Trends Genet. 9:1993;218-214.
43. Wayne R. K., Nash W. G., O'Brien S. J. Chromosome evolution of the Canidae. I. Species with high diploid numbers. Cytogenet. Cell Genet. 44:1987a;123-133.
44. Wayne R. K., Nash W. G., O'Brien S. J. Chromosome evolution of the Canidae. II. Divergence from the primitive carnivore karyotype. Cytogenet. Cell Genet. 44:1987b;134-141.
45. Werner P., Raducha M. G., Prociuk U., Henthorn P. S., Patterson D. F. Physical and linkage mapping of human chromosome 17 loci to dog chromosomes 9 and 5. Genomics. 42:1997;74-82.
46. Wienberg J., Stanyon R., Nash W. G., O'Brien P. C. M., Yang F., O'Brien S. J., Ferguson-Smith M. A. Conservation of human vs. feline genome organization revealed by reciprocal chromosome painting. Cytogenet. Cell Genet. 77:1997;211-217.
47. Wilcox B., Walkowicz C. The Atlas of Dog Breeds of the World. 1993;TFH Publications, Neptune City.
48. Yang F., Carter N. P., Shi L., Ferguson-Smith M. A. A comparative study of karyotypes of muntjacs by chromosome painting. Chromosoma. 103:1995;642-452.
49. Yang F., Müller S., Just R., Ferguson-Smith M. A., Wienberg J. Comparative chromosome painting in mammals: Human and the Indian muntjac (Muntiacus muntjak vaginalis). Genomics. 39:1997;396-401.