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Volumn 68, Issue 3, 2007, Pages 543-553

RNA-based sandwich hybridisation method for detection of lactic acid bacteria in brewery samples

Author keywords

16S RNA; Contaminant detection; Electric biochip; Lactobacillus; Sandwich hybridisation

Indexed keywords

CELL EXTRACT; OLIGONUCLEOTIDE; RNA;

EID: 33847333191     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2006.10.009     Document Type: Article
Times cited : (19)

References (45)
  • 1
    • 11444268072 scopus 로고    scopus 로고
    • Electrical biochip technology - a tool for microarrays and continuous monitoring
    • Albers J., Grunwald T., Nebling E., Piechotta G., and Hintsche R. Electrical biochip technology - a tool for microarrays and continuous monitoring. Anal. Bioanal. Chem. 377 (2003) 521-527
    • (2003) Anal. Bioanal. Chem. , vol.377 , pp. 521-527
    • Albers, J.1    Grunwald, T.2    Nebling, E.3    Piechotta, G.4    Hintsche, R.5
  • 3
    • 0033758582 scopus 로고    scopus 로고
    • Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology
    • Amann R., and Ludwig W. Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology. FEMS Microbiol. Rev. 24 (2000) 555-565
    • (2000) FEMS Microbiol. Rev. , vol.24 , pp. 555-565
    • Amann, R.1    Ludwig, W.2
  • 4
    • 0346024108 scopus 로고    scopus 로고
    • Effect of unlabeled helper probes on detection of an RNA target by bead-based sandwich hybridization
    • Barken K.B., Gabig-Ciminska M., Holmgren A., and Molin S. Effect of unlabeled helper probes on detection of an RNA target by bead-based sandwich hybridization. Biotechniques 36 (2004) 124-132
    • (2004) Biotechniques , vol.36 , pp. 124-132
    • Barken, K.B.1    Gabig-Ciminska, M.2    Holmgren, A.3    Molin, S.4
  • 5
    • 0035144124 scopus 로고    scopus 로고
    • Riboprinting and 16S rRNA gene sequencing for identification of brewery Pediococcus isolates
    • Barney M., Volgyi A., Navarro A., and Ryder D. Riboprinting and 16S rRNA gene sequencing for identification of brewery Pediococcus isolates. Appl. Environ. Microbiol. 67 (2001) 553-560
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 553-560
    • Barney, M.1    Volgyi, A.2    Navarro, A.3    Ryder, D.4
  • 6
    • 0019718969 scopus 로고
    • 3,3′,5,5′- Tetramethylbenzidine as an Ames test negative chromogen for horse-radish peroxidase in enzyme-immunoassay
    • Bos E.S., van der Doelen A.A., van Rooy N., and Schuurs A.H. 3,3′,5,5′- Tetramethylbenzidine as an Ames test negative chromogen for horse-radish peroxidase in enzyme-immunoassay. J. Immunoass. 2 (1981) 187-204
    • (1981) J. Immunoass. , vol.2 , pp. 187-204
    • Bos, E.S.1    van der Doelen, A.A.2    van Rooy, N.3    Schuurs, A.H.4
  • 7
    • 0035097518 scopus 로고    scopus 로고
    • Analysis of a 2,4,6-trichlorophenol-dehalogenating enrichment culture and isolation of the dehalogenating member Desulfitobacterium frappieri strain TCP-A
    • Breitenstein A., Saano A., Salkinoja-Salonen M., Andreesen J.R., and Lechner U. Analysis of a 2,4,6-trichlorophenol-dehalogenating enrichment culture and isolation of the dehalogenating member Desulfitobacterium frappieri strain TCP-A. Arch. Microbiol. 175 (2001) 133-142
    • (2001) Arch. Microbiol. , vol.175 , pp. 133-142
    • Breitenstein, A.1    Saano, A.2    Salkinoja-Salonen, M.3    Andreesen, J.R.4    Lechner, U.5
  • 8
    • 0036907570 scopus 로고    scopus 로고
    • Immunoblotting used for identification of beer spoilage pediococci including the new species Pediococcus claussenii
    • Chaban B., Dobson C.M., Whiting M.S., Bjarnason J., and Ziola B. Immunoblotting used for identification of beer spoilage pediococci including the new species Pediococcus claussenii. J. Am. Soc. Brew. Chem. 60 (2002) 170-175
    • (2002) J. Am. Soc. Brew. Chem. , vol.60 , pp. 170-175
    • Chaban, B.1    Dobson, C.M.2    Whiting, M.S.3    Bjarnason, J.4    Ziola, B.5
  • 10
    • 23544462582 scopus 로고
    • Limits for qualitative detection and quantitative determination: application to radiochemistry
    • Currie L. Limits for qualitative detection and quantitative determination: application to radiochemistry. Anal. Chem. 40 (1968) 586-593
    • (1968) Anal. Chem. , vol.40 , pp. 586-593
    • Currie, L.1
  • 11
    • 0037229567 scopus 로고    scopus 로고
    • Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis
    • Ennahar S., Cai Y.M., and Fujita Y. Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis. Appl. Environ. Microbiol. 69 (2003) 444-451
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 444-451
    • Ennahar, S.1    Cai, Y.M.2    Fujita, Y.3
  • 12
    • 33847246511 scopus 로고    scopus 로고
    • European Brewery Convention, 2001. Nürnberg, Germany, Fachverlag Hans Carl. Analytica-Microbiologica-EBC.
  • 13
    • 0031789907 scopus 로고    scopus 로고
    • Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes
    • Fuchs B.M., Wallner G., Beisker W., Schwippl I., Ludwig W., and Amann R. Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes. Appl. Environ. Microbiol. 64 (1998) 4973-4982
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4973-4982
    • Fuchs, B.M.1    Wallner, G.2    Beisker, W.3    Schwippl, I.4    Ludwig, W.5    Amann, R.6
  • 14
    • 2942589184 scopus 로고    scopus 로고
    • Identification of pathogenic microbial cells and spores by electrochemical detection on a biochip
    • Gabig-Ciminska M., Andresen H., Albers J., Hintsche R., and Enfors S.O. Identification of pathogenic microbial cells and spores by electrochemical detection on a biochip. Microb. Cell Fact. 3 (2004) 2
    • (2004) Microb. Cell Fact. , vol.3 , pp. 2
    • Gabig-Ciminska, M.1    Andresen, H.2    Albers, J.3    Hintsche, R.4    Enfors, S.O.5
  • 17
    • 33847319350 scopus 로고    scopus 로고
    • LightCycler™ PCR establishing itself as a rapid detection method
    • Homann F., Bremer Z., and Möller-Hergt G. LightCycler™ PCR establishing itself as a rapid detection method. Brauwelt Int. 5 (2002) 292-296
    • (2002) Brauwelt Int. , vol.5 , pp. 292-296
    • Homann, F.1    Bremer, Z.2    Möller-Hergt, G.3
  • 18
    • 0030297462 scopus 로고    scopus 로고
    • Specific spoilage organisms in breweries and laboratory media for their detection
    • Jespersen L., and Jakobsen M. Specific spoilage organisms in breweries and laboratory media for their detection. Int. J. Food Microbiol. (1996) 139-155
    • (1996) Int. J. Food Microbiol. , pp. 139-155
    • Jespersen, L.1    Jakobsen, M.2
  • 19
    • 27744443517 scopus 로고    scopus 로고
    • Application of an electric DNA-chip for the expression analysis of bioprocess-relevant marker genes of Bacillus subtilis
    • Jürgen B., Barken K.B., Tobisch S., Pioch D., Wümpelmann M., Hecker M., and Schweder T. Application of an electric DNA-chip for the expression analysis of bioprocess-relevant marker genes of Bacillus subtilis. Biotechnol. Bioeng. 92 (2005) 299-307
    • (2005) Biotechnol. Bioeng. , vol.92 , pp. 299-307
    • Jürgen, B.1    Barken, K.B.2    Tobisch, S.3    Pioch, D.4    Wümpelmann, M.5    Hecker, M.6    Schweder, T.7
  • 21
    • 33645122169 scopus 로고    scopus 로고
    • Characterization of the brewery spoilage bacterium Obesumbacterium proteus by automated ribotyping and development of PCR methods for its biotype 1
    • Koivula T.T., Juvonen R., Haikara A., and Suihko M.L. Characterization of the brewery spoilage bacterium Obesumbacterium proteus by automated ribotyping and development of PCR methods for its biotype 1. J. Appl. Microbiol. 100 (2006) 398-406
    • (2006) J. Appl. Microbiol. , vol.100 , pp. 398-406
    • Koivula, T.T.1    Juvonen, R.2    Haikara, A.3    Suihko, M.L.4
  • 25
    • 23844497178 scopus 로고    scopus 로고
    • Rapid detection and counting of viable beer-spoilage lactic acid bacteria using a monoclonal chemiluminescence enzyme immunoassay and a CCD camera
    • March C., Manclus J.J., Abad A., Navarro A., and Montoya A. Rapid detection and counting of viable beer-spoilage lactic acid bacteria using a monoclonal chemiluminescence enzyme immunoassay and a CCD camera. J. Immunol. Methods 303 (2005) 92-104
    • (2005) J. Immunol. Methods , vol.303 , pp. 92-104
    • March, C.1    Manclus, J.J.2    Abad, A.3    Navarro, A.4    Montoya, A.5
  • 26
    • 0036399693 scopus 로고    scopus 로고
    • Rapid detection of Obesumbacterium proteus from yeast and wort using polymerase chain reaction
    • Maugueret T.M., and Walker S.L. Rapid detection of Obesumbacterium proteus from yeast and wort using polymerase chain reaction. Lett. Appl. Microbiol. 35 (2002) 281-284
    • (2002) Lett. Appl. Microbiol. , vol.35 , pp. 281-284
    • Maugueret, T.M.1    Walker, S.L.2
  • 28
    • 0842348793 scopus 로고    scopus 로고
    • Electrical detection of viral DNA using ultramicroelectrode arrays
    • Nebling E., Grunwald T., Albers J., Schafer P., and Hintsche R. Electrical detection of viral DNA using ultramicroelectrode arrays. Anal. Chem. 76 (2004) 689-696
    • (2004) Anal. Chem. , vol.76 , pp. 689-696
    • Nebling, E.1    Grunwald, T.2    Albers, J.3    Schafer, P.4    Hintsche, R.5
  • 30
    • 33847318358 scopus 로고    scopus 로고
    • Gram-positive brewery bacteria
    • Priest F.G., and Campbell I. (Eds), Kluwer, New York
    • Priest F. Gram-positive brewery bacteria. In: Priest F.G., and Campbell I. (Eds). Brewing Microbiology (2003), Kluwer, New York 181-218
    • (2003) Brewing Microbiology , pp. 181-218
    • Priest, F.1
  • 32
    • 0037214523 scopus 로고    scopus 로고
    • Enumeration of bacterial cell numbers by amplified firefly bioluminescence without cultivation
    • Sakakibara T., Murakami S., and Imai K. Enumeration of bacterial cell numbers by amplified firefly bioluminescence without cultivation. Anal. Biochem. 312 (2003) 48-56
    • (2003) Anal. Biochem. , vol.312 , pp. 48-56
    • Sakakibara, T.1    Murakami, S.2    Imai, K.3
  • 33
    • 0242659822 scopus 로고    scopus 로고
    • Beer spoilage bacteria and hop resistance
    • Sakamoto K., and Konings W.N. Beer spoilage bacteria and hop resistance. Int. J. Food Microbiol. 89 (2003) 105-124
    • (2003) Int. J. Food Microbiol. , vol.89 , pp. 105-124
    • Sakamoto, K.1    Konings, W.N.2
  • 35
    • 0032497958 scopus 로고    scopus 로고
    • Detection of beer spoilage bacteria Megasphaera and Pectinatus by polymerase chain reaction and colorimetric microplate hybridization
    • Satokari R., Juvonen R., Mallison K., von Wright A., and Haikara A. Detection of beer spoilage bacteria Megasphaera and Pectinatus by polymerase chain reaction and colorimetric microplate hybridization. Int. J. Food Microbiol. 45 (1998) 119-127
    • (1998) Int. J. Food Microbiol. , vol.45 , pp. 119-127
    • Satokari, R.1    Juvonen, R.2    Mallison, K.3    von Wright, A.4    Haikara, A.5
  • 37
    • 0036154150 scopus 로고    scopus 로고
    • Genomic diversity within the genus Pediococcus as revealed by randomly amplified polymorphic DNA PCR and pulsed-field gel electrophoresis
    • Simpson P.J., Stanton C., Fitzgerald G.F., and Ross R.P. Genomic diversity within the genus Pediococcus as revealed by randomly amplified polymorphic DNA PCR and pulsed-field gel electrophoresis. Appl. Environ. Microbiol. 68 (2002) 765-771
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 765-771
    • Simpson, P.J.1    Stanton, C.2    Fitzgerald, G.F.3    Ross, R.P.4
  • 39
    • 33847311897 scopus 로고    scopus 로고
    • Storgårds, E., 2000. Process hygiene control in beer production and dispensing. PhD thesis. University of Helsinki, Faculty of Agriculture and Forestry, Dept. Appl. Chem. Microbiol.
  • 40
    • 0035534996 scopus 로고    scopus 로고
    • Characterization of Pectinatus and Megasphaera strains by automated ribotyping
    • Suihko M.L., and Haikara A. Characterization of Pectinatus and Megasphaera strains by automated ribotyping. J. Inst. Brew. 107 (2001) 175-184
    • (2001) J. Inst. Brew. , vol.107 , pp. 175-184
    • Suihko, M.L.1    Haikara, A.2
  • 41
    • 18444381177 scopus 로고    scopus 로고
    • Application of ribotyping and rDNA internal space analysis (RISA) for assessment of microflora in brewery environments
    • Takeuchi A., Iijima K., Suzuki K., Ozaki K., and Yamashita H. Application of ribotyping and rDNA internal space analysis (RISA) for assessment of microflora in brewery environments. J. Am. Soc. Brew. Chem. 63 (2005) 73-75
    • (2005) J. Am. Soc. Brew. Chem. , vol.63 , pp. 73-75
    • Takeuchi, A.1    Iijima, K.2    Suzuki, K.3    Ozaki, K.4    Yamashita, H.5
  • 42
    • 0035461225 scopus 로고    scopus 로고
    • Detection of legionellae in hospital water samples by quantitative real-time LightCycler PCR
    • Wellinghausen N., Frost C., and Marre R. Detection of legionellae in hospital water samples by quantitative real-time LightCycler PCR. Appl. Environ. Microbiol. 67 (2001) 3985-3993
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 3985-3993
    • Wellinghausen, N.1    Frost, C.2    Marre, R.3
  • 44
    • 0034897576 scopus 로고    scopus 로고
    • Novel quantitative method for detection of Pectinatus using rRNA targeted fluorescent probes
    • Yasuhara T., Yuuki T., and Kagami N. Novel quantitative method for detection of Pectinatus using rRNA targeted fluorescent probes. J. Am. Soc. Brew. Chem. 59 (2001) 121
    • (2001) J. Am. Soc. Brew. Chem. , vol.59 , pp. 121
    • Yasuhara, T.1    Yuuki, T.2    Kagami, N.3
  • 45
    • 0030712855 scopus 로고    scopus 로고
    • Imaging of Lactobacillus brevis single cells and microcolonies without a microscope by an ultrasensitive chemiluminescent enzyme immunoassay with a photon-counting television camera
    • Yasui T., and Yoda K. Imaging of Lactobacillus brevis single cells and microcolonies without a microscope by an ultrasensitive chemiluminescent enzyme immunoassay with a photon-counting television camera. Appl. Environm. Microbiol. 63 (1997) 4528-4533
    • (1997) Appl. Environm. Microbiol. , vol.63 , pp. 4528-4533
    • Yasui, T.1    Yoda, K.2


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