DRE-1: An Evolutionarily Conserved F Box Protein that Regulates C. elegans Developmental Age

Developmental Cell

Volumn 12, Issue 3, 2007, Pages 443-455

  Fielenbach, Nicole ^a   Guardavaccaro, Daniele ^b   Neubert, Kerstin ^c   Chan, Tammy ^a   Li, Dongling ^a   Feng, Qin ^a   Hutter, Harald ^d   Pagano, Michele ^b   Antebi, Adam ^a  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

^b NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c MAX PLANCK INSTITUTE FOR MOLECULAR GENETICS   (Germany)

^d SIMON FRASER UNIVERSITY   (Canada)

Author keywords

DEVBIO; PROTEINS

Indexed keywords

CULLIN; DRE 1 PROTEIN; F BOX PROTEIN; FBXO11 PROTEIN; PROTEIN ARGININE METHYLTRANSFERASE; RBX PROTEIN; S PHASE KINASE ASSOCIATED PROTEIN; S PHASE KINASE ASSOCIATED PROTEIN 1; SKP 1 PROTEIN; UBIQUITIN PROTEIN LIGASE; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CAENORHABDITIS ELEGANS; CELL FUSION; CONTROLLED STUDY; GENE INTERACTION; GENE LOCUS; GONAD DEVELOPMENT; LARVAL STAGE; MUTANT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PROTEIN DEGRADATION; RNA INTERFERENCE; STEM CELL;

ACTIVIN RECEPTORS, TYPE I; ANIMALS; CAENORHABDITIS ELEGANS; CAENORHABDITIS ELEGANS PROTEINS; CARRIER PROTEINS; CELL CYCLE PROTEINS; CELL DIFFERENTIATION; CONSERVED SEQUENCE; CULLIN PROTEINS; DOWN-REGULATION; EVOLUTION, MOLECULAR; F-BOX PROTEINS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; LARVA; PROTEIN-ARGININE N-METHYLTRANSFERASE; RNA INTERFERENCE; SKP CULLIN F-BOX PROTEIN LIGASES;

CAENORHABDITIS ELEGANS; METAZOA;

EID: 33847221398     PISSN: 15345807     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.devcel.2007.01.018     Document Type: Article

References (47)

1. Abbott A.L., Alvarez-Saavedra E., Miska E.A., Lau N.C., Bartel D.P., Horvitz H.R., and Ambros V. The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in C. elegans. Dev. Cell 9 (2005) 403-414
2. Abrahante J.E., Daul A.L., Li M., Volk M.L., Tennessen J.M., Miller E.A., and Rougvie A.E. The C. elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs. Dev. Cell 4 (2003) 625-637
3. Ambros V. A hierarchy of regulatory genes controls a larva-to-adult developmental switch in C. elegans. Cell 57 (1989) 49-57
4. Ambros V., and Horvitz H.R. Heterochronic mutants of the nematode C. elegans. Science 226 (1984) 409-416
5. Antebi A., Culotti J.G., and Hedgecock E.M. daf-12 regulates developmental age and the dauer alternative in C. elegans. Development 125 (1998) 1191-1205
6. Antebi A., Yeh W.H., Tait D., Hedgecock E.M., and Riddle D.L. daf-12 encodes a nuclear receptor that regulates the dauer diapause and developmental age in C. elegans. Genes Dev. 14 (2000) 1512-1527
7. Banerjee D., Kwok A., Lin S.Y., and Slack F.J. Developmental timing in C. elegans is regulated by kin-20 and tim-1, homologs of core circadian clock genes. Dev. Cell 8 (2005) 287-295
8. Bettinger J.C., Lee K., and Rougvie A.E. Stage-specific accumulation of the terminal differentiation factor LIN-29 during C. elegans development. Development 122 (1996) 2517-2527
9. Cardozo T., and Pagano M. The SCF ubiquitin ligase: insights into a molecular machine. Nat. Rev. Mol. Cell Biol. 5 (2004) 739-751
10. Chalfie M., Horvitz H.R., and Sulston J.E. Mutations that lead to reiterations in the cell lineages of C. elegans. Cell 24 (1981) 59-69
11. Chiba T., and Tanaka K. Cullin-based ubiquitin ligase and its control by NEDD8-conjugating system. Curr. Protein Pept. Sci. 5 (2004) 177-184
12. Cook J.R., Lee J.H., Yang Z.H., Krause C.D., Herth N., Hoffmann R., and Pestka S. FBXO11/PRMT9, a new protein arginine methyltransferase, symmetrically dimethylates arginine residues. Biochem. Biophys. Res. Commun. 342 (2006) 472-481
13. Fay D.S., Stanley H.M., Han M., and Wood W.B. A C. elegans homologue of hunchback is required for late stages of development but not early embryonic patterning. Dev. Biol. 205 (1999) 240-253
14. Gerisch B., Weitzel C., Kober-Eisermann C., Rottiers V., and Antebi A. A hormonal signaling pathway influencing C. elegans metabolism, reproductive development, and life span. Dev. Cell 1 (2001) 841-851
15. Grosshans H., Johnson T., Reinert K.L., Gerstein M., and Slack F.J. The temporal patterning microRNA let-7 regulates several transcription factors at the larval to adult transition in C. elegans. Dev. Cell 8 (2005) 321-330
16. Hallam S.J., and Jin Y. lin-14 regulates the timing of synaptic remodelling in C. elegans. Nature 395 (1998) 78-82
17. Hardisty-Hughes R.E., Tateossian H., Morse S.A., Romero M.R., Middleton A., Tymowska-Lalanne Z., Hunter A.J., Cheeseman M., and Brown S.D. A mutation in the F-box gene, Fbxo11, causes otitis media in the Jeff mouse. Hum. Mol. Genet. 15 (2006) 3273-3279
18. Held J.M., White M.P., Fisher A.L., Gibson B.W., Lithgow G.J., and Gill M.S. DAF-12-dependent rescue of dauer formation in C. elegans by (25S)-cholestenoic acid. Aging Cell 5 (2006) 283-291
19. Hubbard E.J., Wu G., Kitajewski J., and Greenwald I. sel-10, a negative regulator of lin-12 activity in C. elegans, encodes a member of the CDC4 family of proteins. Genes Dev. 11 (1997) 3182-3193
20. Jeon M., Gardner H.F., Miller E.A., Deshler J., and Rougvie A.E. Similarity of the C. elegans developmental timing protein LIN-42 to circadian rhythm proteins. Science 286 (1999) 1141-1146
21. Jia K., Albert P.S., and Riddle D.L. DAF-9, a cytochrome P450 regulating C. elegans larval development and adult longevity. Development 129 (2002) 221-231
22. Jin J., Cardozo T., Lovering R.C., Elledge S.J., Pagano M., and Harper J.W. Systematic analysis and nomenclature of mammalian F-box proteins. Genes Dev. 18 (2004) 2573-2580
23. Kwon Y.T., Reiss Y., Fried V.A., Hershko A., Yoon J.K., Gonda D.K., Sangan P., Copeland N.G., Jenkins N.A., and Varshavsky A. The mouse and human genes encoding the recognition component of the N-end rule pathway. Proc. Natl. Acad. Sci. USA 95 (1998) 7898-7903
24. Lagos-Quintana M., Rauhut R., Yalcin A., Meyer J., Lendeckel W., and Tuschl T. Identification of tissue-specific microRNAs from mouse. Curr. Biol. 12 (2002) 735-739
25. Le Poole I.C., Sarangarajan R., Zhao Y., Stennett L.S., Brown T.L., Sheth P., Miki T., and Boissy R.E. 'VIT1', a novel gene associated with vitiligo. Pigment Cell Res. 14 (2001) 475-484
26. Lee R.C., Feinbaum R.L., and Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75 (1993) 843-854
27. Li M., Jones-Rhoades M.W., Lau N.C., Bartel D.P., and Rougvie A.E. Regulatory mutations of mir-48, a C. elegans let-7 family microRNA, cause developmental timing defects. Dev. Cell 9 (2005) 415-422
28. Liao E.H., Hung W., Abrams B., and Zhen M. An SCF-like ubiquitin ligase complex that controls presynaptic differentiation. Nature 430 (2004) 345-350
29. Lin S.Y., Johnson S.M., Abraham M., Vella M.C., Pasquinelli A., Gamberi C., Gottlieb E., and Slack F.J. The C. elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target. Dev. Cell 4 (2003) 639-650
30. Liu Z.C., and Ambros V. Heterochronic genes control the stage-specific initiation and expression of the dauer larva developmental program in C. elegans. Genes Dev. 3 (1989) 2039-2049
31. Ludewig A.H., Kober-Eisermann C., Weitzel C., Bethke A., Neubert K., Gerisch B., Hutter H., and Antebi A. A novel nuclear receptor/coregulator complex controls C. elegans lipid metabolism, larval development, and aging. Genes Dev. 18 (2004) 2120-2133
32. Moss E.G., Lee R.C., and Ambros V. The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA. Cell 88 (1997) 637-646
33. Motola D.L., Cummins C.L., Rottiers V., Sharma K.K., Li T., Li Y., Suino-Powell K., Xu H.E., Auchus R.J., Antebi A., and Mangelsdorf D.J. Identification of ligands for DAF-12 that govern dauer formation and reproduction in C. elegans. Cell 124 (2006) 1209-1223
34. Pasquinelli A.E., Reinhart B.J., Slack F., Martindale M.Q., Kuroda M.I., Maller B., Hayward D.C., Ball E.E., Degnan B., Muller P., et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature 408 (2000) 86-89
35. Pepper A.S., McCane J.E., Kemper K., Yeung D.A., Lee R.C., Ambros V., and Moss E.G. The C. elegans heterochronic gene lin-46 affects developmental timing at two larval stages and encodes a relative of the scaffolding protein gephyrin. Development 131 (2004) 2049-2059
36. Petroski M.D., and Deshaies R.J. Function and regulation of cullin-RING ubiquitin ligases. Nat. Rev. Mol. Cell Biol. 6 (2005) 9-20
37. Reinhart B.J., Slack F.J., Basson M., Pasquinelli A.E., Bettinger J.C., Rougvie A.E., Horvitz H.R., and Ruvkun G. The 21-nucleotide let-7 RNA regulates developmental timing in C. elegans. Nature 403 (2000) 901-906
38. Rottiers V., Motola D.L., Gerisch B., Cummins C.L., Nishiwaki K., Mangelsdorf D.J., and Antebi A. Hormonal control of C. elegans dauer formation and life span by a Rieske-like oxygenase. Dev. Cell 10 (2006) 473-482
39. Rougvie A.E. Intrinsic and extrinsic regulators of developmental timing: from miRNAs to nutritional cues. Development 132 (2005) 3787-3798
40. Rougvie A.E., and Ambros V. The heterochronic gene lin-29 encodes a zinc finger protein that controls a terminal differentiation event in C. elegans. Development 121 (1995) 2491-2500
41. Ruvkun G., and Giusto J. The C. elegans heterochronic gene lin-14 encodes a nuclear protein that forms a temporal developmental switch. Nature 338 (1989) 313-319
42. Slack F.J., Basson M., Liu Z., Ambros V., Horvitz H.R., and Ruvkun G. The lin-41 RBCC gene acts in the C. elegans heterochronic pathway between the let-7 regulatory RNA and the LIN-29 transcription factor. Mol. Cell 5 (2000) 659-669
43. Sulston J.E., and Horvitz H.R. Post-embryonic cell lineages of the nematode, C. elegans. Dev. Biol. 56 (1977) 110-156
44. Sulston J.E., Schierenberg E., White J.G., and Thomson J.N. The embryonic cell lineage of the nematode C. elegans. Dev. Biol. 100 (1983) 64-119
45. Tennessen J.M., Gardner H.F., Volk M.L., and Rougvie A.E. Novel heterochronic functions of the C. elegans period-related protein LIN-42. Dev. Biol. 289 (2006) 30-43
46. Wicks S.R., Yeh R.T., Gish W.R., Waterston R.H., and Plasterk R.H. Rapid gene mapping in C. elegans using a high density polymorphism map. Nat. Genet. 28 (2001) 160-164
47. Wightman B., Ha I., and Ruvkun G. Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell 75 (1993) 855-862