메뉴 건너뛰기




Volumn 21, Issue 2, 2007, Pages 148-159

Modeling complex genetic interactions in a simple eukaryotic genome: Actin displays a rich spectrum of complex haploinsufficiencies

Author keywords

Actin; Cytoskeleton; Genetic interactions; Haploinsufficiency

Indexed keywords

ACTIN; ACTIN BINDING PROTEIN; CYTOSKELETON PROTEIN; F ACTIN;

EID: 33846528944     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.1477507     Document Type: Article
Times cited : (76)

References (52)
  • 2
    • 4444316404 scopus 로고    scopus 로고
    • Genetic and phenotypic characterization of mutations in myosin-binding protein C (MYBPC3) in 81 families with familial hypertrophic cardiomyopathy: Total or partial haploinsufficiency
    • Andersen, P.S., Havndrup, O., Bundgaard, H., Larsen, L.A., Vuust, J., Pedersen, A.K., Kjeldsen, K., and Christiansen, M. 2004. Genetic and phenotypic characterization of mutations in myosin-binding protein C (MYBPC3) in 81 families with familial hypertrophic cardiomyopathy: Total or partial haploinsufficiency. Eur. J. Hum. Genet. 12: 673-677.
    • (2004) Eur. J. Hum. Genet , vol.12 , pp. 673-677
    • Andersen, P.S.1    Havndrup, O.2    Bundgaard, H.3    Larsen, L.A.4    Vuust, J.5    Pedersen, A.K.6    Kjeldsen, K.7    Christiansen, M.8
  • 4
    • 1242310814 scopus 로고    scopus 로고
    • Endocytosis: Actin in the driving seat
    • Ayscough, K.R. 2004. Endocytosis: Actin in the driving seat. Curr. Biol. 14: R124-R126.
    • (2004) Curr. Biol , vol.14
    • Ayscough, K.R.1
  • 5
    • 12444347534 scopus 로고    scopus 로고
    • A protein's final ESCRT
    • Babst, M. 2005. A protein's final ESCRT. Traffic 6: 2-9.
    • (2005) Traffic , vol.6 , pp. 2-9
    • Babst, M.1
  • 6
    • 1642499365 scopus 로고    scopus 로고
    • The ctf13-30/CTF13 genomic haploinsufficiency modifier screen identifies the yeast chromatin remodeling complex RSC, which is required for the establishment of sister chromatid cohesion
    • Baetz, K.K., Krogan, N.J., Emili, A., Greenblatt, J., and Hieter, P. 2004. The ctf13-30/CTF13 genomic haploinsufficiency modifier screen identifies the yeast chromatin remodeling complex RSC, which is required for the establishment of sister chromatid cohesion. Mol. Cell. Biol. 24: 1232-1244.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 1232-1244
    • Baetz, K.K.1    Krogan, N.J.2    Emili, A.3    Greenblatt, J.4    Hieter, P.5
  • 8
    • 0032494082 scopus 로고    scopus 로고
    • The yeast V159N actin mutant reveals roles for actin dynamics in vivo
    • Belmont, L.D. and Drubin, D.G. 1998. The yeast V159N actin mutant reveals roles for actin dynamics in vivo. J. Cell Biol. 142: 1289-1299.
    • (1998) J. Cell Biol , vol.142 , pp. 1289-1299
    • Belmont, L.D.1    Drubin, D.G.2
  • 9
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate in multiple testing under dependency
    • Benjamini, Y. and Yekutieli, D. 2001. The control of the false discovery rate in multiple testing under dependency. Ann. Statist. 29: 1165-1188.
    • (2001) Ann. Statist , vol.29 , pp. 1165-1188
    • Benjamini, Y.1    Yekutieli, D.2
  • 11
    • 0036316727 scopus 로고    scopus 로고
    • ProSAP/Shank proteins - A family of higher order organizing molecules of the postsynaptic density with an emerging role in human neurological disease
    • Boeckers, T.M., Bockmann, J., Kreutz, M.R., and Gundelfinger, E.D. 2002. ProSAP/Shank proteins - A family of higher order organizing molecules of the postsynaptic density with an emerging role in human neurological disease. J. Neurochem. 81: 903-910.
    • (2002) J. Neurochem , vol.81 , pp. 903-910
    • Boeckers, T.M.1    Bockmann, J.2    Kreutz, M.R.3    Gundelfinger, E.D.4
  • 14
    • 0028363670 scopus 로고
    • Mutations in Hsp83 and cdc37 impair signaling by the sevenless receptor tyrosine kinase in Drosophila
    • Cutforth, T. and Rubin, G.M. 1994. Mutations in Hsp83 and cdc37 impair signaling by the sevenless receptor tyrosine kinase in Drosophila. Cell 77: 1027-1036.
    • (1994) Cell , vol.77 , pp. 1027-1036
    • Cutforth, T.1    Rubin, G.M.2
  • 17
    • 0020378065 scopus 로고
    • Polycomblike: A gene that appears to be required for the normal expression of the bithorax and antennapedia gene complexes of Drosophila melanogaster
    • Duncan, I.M. 1982. Polycomblike: A gene that appears to be required for the normal expression of the bithorax and antennapedia gene complexes of Drosophila melanogaster. Genetics 102: 49-70.
    • (1982) Genetics , vol.102 , pp. 49-70
    • Duncan, I.M.1
  • 18
    • 0025307598 scopus 로고
    • Null alleles of SAC7 suppress temperature sensitive actin mutations in Saccharomyces cerevisiae
    • Dunn, T.M. and Shortle, D. 1990. Null alleles of SAC7 suppress temperature sensitive actin mutations in Saccharomyces cerevisiae. Mol. Cell. Biol. 10: 2308-2314.
    • (1990) Mol. Cell. Biol , vol.10 , pp. 2308-2314
    • Dunn, T.M.1    Shortle, D.2
  • 21
    • 0021796842 scopus 로고
    • Altered fidelity of mitotic chromosome transmission in cell cycle mutants of S. cerevisiae
    • Hartwell, L.H. and Smith, D. 1985. Altered fidelity of mitotic chromosome transmission in cell cycle mutants of S. cerevisiae. Genetics 110: 381-395.
    • (1985) Genetics , vol.110 , pp. 381-395
    • Hartwell, L.H.1    Smith, D.2
  • 24
    • 5144235223 scopus 로고    scopus 로고
    • A screen for genes that interact with the Drosophila pair-rule segmentation gene fushi tarazu
    • Kankel, M.W., Duncan, D.M., and Duncan, I. 2004. A screen for genes that interact with the Drosophila pair-rule segmentation gene fushi tarazu. Genetics 168: 161-180.
    • (2004) Genetics , vol.168 , pp. 161-180
    • Kankel, M.W.1    Duncan, D.M.2    Duncan, I.3
  • 25
    • 0029869355 scopus 로고    scopus 로고
    • A screen for genes that function downstream of Ras1 during Drosophila eye development
    • Karim, F.D., Chang, H.C., Therrien, M., Wassarman, D.A., Laverty, T., and Rubin, G.M. 1996. A screen for genes that function downstream of Ras1 during Drosophila eye development. Genetics 143: 315-329.
    • (1996) Genetics , vol.143 , pp. 315-329
    • Karim, F.D.1    Chang, H.C.2    Therrien, M.3    Wassarman, D.A.4    Laverty, T.5    Rubin, G.M.6
  • 26
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • Kellis, M., Birren, B.W., and Lander, E.S. 2004. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428: 617-624.
    • (2004) Nature , vol.428 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 27
    • 0141646441 scopus 로고    scopus 로고
    • Disregulated RhoGTPases and actin cytoskeleton contribute to the migration defect in Lis1-deficient neurons
    • Kholmanskikh, S.S., Dobrin, J.S., Wynshaw-Boris, A., Letourneau, P.C., and Ross, M.E. 2003. Disregulated RhoGTPases and actin cytoskeleton contribute to the migration defect in Lis1-deficient neurons. J. Neurosci. 23: 8673-8681.
    • (2003) J. Neurosci , vol.23 , pp. 8673-8681
    • Kholmanskikh, S.S.1    Dobrin, J.S.2    Wynshaw-Boris, A.3    Letourneau, P.C.4    Ross, M.E.5
  • 28
    • 23744484194 scopus 로고    scopus 로고
    • Genetic analysis of Pten and Tsc2 functional interactions in the mouse reveals asymmetrical haploinsufficiency in tumor suppression
    • Ma, L., Teruya-Feldstein, J., Behrendt, N., Chen, Z., Noda, T., Hino, O., Cordon-Cardo, C., and Pandolfi, P.P. 2005. Genetic analysis of Pten and Tsc2 functional interactions in the mouse reveals asymmetrical haploinsufficiency in tumor suppression. Genes & Dev. 19: 1779-1786.
    • (2005) Genes & Dev , vol.19 , pp. 1779-1786
    • Ma, L.1    Teruya-Feldstein, J.2    Behrendt, N.3    Chen, Z.4    Noda, T.5    Hino, O.6    Cordon-Cardo, C.7    Pandolfi, P.P.8
  • 29
    • 0022482135 scopus 로고
    • Normal stoichiometry of histone dimer sets is necessary for high fidelity of mitotic chromosome transmission
    • Meeks-Wagner, D. and Hartwell, L.H. 1986. Normal stoichiometry of histone dimer sets is necessary for high fidelity of mitotic chromosome transmission. Cell 44: 43-52.
    • (1986) Cell , vol.44 , pp. 43-52
    • Meeks-Wagner, D.1    Hartwell, L.H.2
  • 31
    • 0035162931 scopus 로고    scopus 로고
    • A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae
    • Ni, L. and Snyder, M. 2001. A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol. Biol. Cell 12: 2147-2170.
    • (2001) Mol. Biol. Cell , vol.12 , pp. 2147-2170
    • Ni, L.1    Snyder, M.2
  • 32
    • 0024549504 scopus 로고
    • Suppressors of yeast actin mutations
    • Novick, P., Osmond, B.C., and Botstein, D. 1989. Suppressors of yeast actin mutations. Genetics 121: 659-674.
    • (1989) Genetics , vol.121 , pp. 659-674
    • Novick, P.1    Osmond, B.C.2    Botstein, D.3
  • 33
    • 33645285000 scopus 로고    scopus 로고
    • Molecular functions of nuclear actin in transcription
    • Percipalle, P. and Visa, N. 2006. Molecular functions of nuclear actin in transcription. J. Cell Biol. 172: 967-971.
    • (2006) J. Cell Biol , vol.172 , pp. 967-971
    • Percipalle, P.1    Visa, N.2
  • 34
    • 0019739817 scopus 로고
    • Isolation of dominant suppressor mutations for position-effect variegation in Drosophila melanogaster
    • Reuter, G. and Wolff, I. 1981. Isolation of dominant suppressor mutations for position-effect variegation in Drosophila melanogaster. Mol. Gen. Genet. 182: 516-519.
    • (1981) Mol. Gen. Genet , vol.182 , pp. 516-519
    • Reuter, G.1    Wolff, I.2
  • 35
    • 0036269973 scopus 로고    scopus 로고
    • Proteomics of the eukaryotic transcription machinery: Identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry
    • Sanders, S.L., Jennings, J., Canutescu, A., Link, A.J., and Weil, P.A. 2002. Proteomics of the eukaryotic transcription machinery: Identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry. Mol. Cell. Biol. 22: 4723-4738.
    • (2002) Mol. Cell. Biol , vol.22 , pp. 4723-4738
    • Sanders, S.L.1    Jennings, J.2    Canutescu, A.3    Link, A.J.4    Weil, P.A.5
  • 36
    • 2542432915 scopus 로고    scopus 로고
    • Haploinsufficiency for tumour suppressor genes: When you don't need to go all the way
    • Santarosa, M. and Ashworth, A. 2004. Haploinsufficiency for tumour suppressor genes: When you don't need to go all the way. Biochim. Biophys. Acta 1654: 105-122.
    • (2004) Biochim. Biophys. Acta , vol.1654 , pp. 105-122
    • Santarosa, M.1    Ashworth, A.2
  • 38
    • 23844553096 scopus 로고    scopus 로고
    • A discriminative model for identifying spatial cis-regulatory modules
    • Segal, E. and Sharan, R. 2005. A discriminative model for identifying spatial cis-regulatory modules. J. Comput. Biol. 12: 822-834.
    • (2005) J. Comput. Biol , vol.12 , pp. 822-834
    • Segal, E.1    Sharan, R.2
  • 39
    • 0036177862 scopus 로고    scopus 로고
    • Transcription factor haploinsufficiency: When half a loaf is not enough
    • Seidman, J.G. and Seidman, C. 2002. Transcription factor haploinsufficiency: When half a loaf is not enough. J. Clin. Invest. 109: 451-455.
    • (2002) J. Clin. Invest , vol.109 , pp. 451-455
    • Seidman, J.G.1    Seidman, C.2
  • 40
    • 33744985540 scopus 로고    scopus 로고
    • Endosomal and non-endosomal functions of ESCRT proteins
    • Slagsvold, T., Pattni, K., Malerod, L., and Stenmark, H. 2006. Endosomal and non-endosomal functions of ESCRT proteins. Trends Cell Biol. 16: 317-326.
    • (2006) Trends Cell Biol , vol.16 , pp. 317-326
    • Slagsvold, T.1    Pattni, K.2    Malerod, L.3    Stenmark, H.4
  • 42
    • 0024024370 scopus 로고
    • Unlinked noncomplementation: Isolation of new conditional lethal mutations in each of the tubulin genes of Saccharomyces cerevisiae
    • Stearns, T. and Botstein, D. 1988. Unlinked noncomplementation: Isolation of new conditional lethal mutations in each of the tubulin genes of Saccharomyces cerevisiae. Genetics 119: 249-260.
    • (1988) Genetics , vol.119 , pp. 249-260
    • Stearns, T.1    Botstein, D.2
  • 43
    • 0141504246 scopus 로고    scopus 로고
    • Small fitness effects and weak genetic interactions between deleterious mutations in heterozygous loci of the yeast Saccharomyces cerevisiae
    • Szafraniec, K., Wloch, D.M., Sliwa, P., Borts, R.H., and Korona, R. 2003. Small fitness effects and weak genetic interactions between deleterious mutations in heterozygous loci of the yeast Saccharomyces cerevisiae. Genet. Res. 82: 19-31.
    • (2003) Genet. Res , vol.82 , pp. 19-31
    • Szafraniec, K.1    Wloch, D.M.2    Sliwa, P.3    Borts, R.H.4    Korona, R.5
  • 45
    • 0029985177 scopus 로고    scopus 로고
    • Analysis of dominant enhancers and suppressors of activated Notch in Drosophila
    • Verheyen, E.M., Purcell, K.J., Fortini, M.E., and Artavanis-Tsakonas, S. 1996. Analysis of dominant enhancers and suppressors of activated Notch in Drosophila. Genetics 144: 1127-1141.
    • (1996) Genetics , vol.144 , pp. 1127-1141
    • Verheyen, E.M.1    Purcell, K.J.2    Fortini, M.E.3    Artavanis-Tsakonas, S.4
  • 46
    • 0027519301 scopus 로고
    • Genetic evidence for functional interactions between actin noncomplementing (Anc) gene products and actin cytoskeletal proteins in Saccharomyces cerevisiae
    • Vinh, D.B., Welch, M.D., Corsi, A.K., Wertman, K.F., and Drubin, D.G. 1993. Genetic evidence for functional interactions between actin noncomplementing (Anc) gene products and actin cytoskeletal proteins in Saccharomyces cerevisiae. Genetics 135: 275-286.
    • (1993) Genetics , vol.135 , pp. 275-286
    • Vinh, D.B.1    Welch, M.D.2    Corsi, A.K.3    Wertman, K.F.4    Drubin, D.G.5
  • 48
    • 0027491474 scopus 로고
    • Screens for extragenic mutations that fail to complement act1 alleles identify genes that are important for actin function in Saccharomyces cerevisiae
    • Welch, M.D., Vinh, D.B., Okamura, H.H., and Drubin, D.G. 1993. Screens for extragenic mutations that fail to complement act1 alleles identify genes that are important for actin function in Saccharomyces cerevisiae. Genetics 135: 265-274.
    • (1993) Genetics , vol.135 , pp. 265-274
    • Welch, M.D.1    Vinh, D.B.2    Okamura, H.H.3    Drubin, D.G.4
  • 49
    • 0026737363 scopus 로고
    • Systematic mutational analysis of the yeast ACT1 gene
    • Wertman, K.F., Drubin, D.G., and Botstein, D. 1992. Systematic mutational analysis of the yeast ACT1 gene. Genetics 132: 337-350.
    • (1992) Genetics , vol.132 , pp. 337-350
    • Wertman, K.F.1    Drubin, D.G.2    Botstein, D.3
  • 51
    • 0029974453 scopus 로고    scopus 로고
    • Extraribosomal functions of ribosomal proteins
    • Wool, I.G. 1996. Extraribosomal functions of ribosomal proteins. Trends Biochem. Sci. 21: 164-165.
    • (1996) Trends Biochem. Sci , vol.21 , pp. 164-165
    • Wool, I.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.