메뉴 건너뛰기




Volumn 9, Issue 2, 2007, Pages 287-297

Key role of selective viral-induced mortality in determining marine bacterial community composition

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIOPHAGE; BACTERIUM; CLASSIFICATION; GROWTH, DEVELOPMENT AND AGING; MICROBIOLOGY; PACIFIC OCEAN; PHYLOGENY; PHYSIOLOGY; POPULATION DENSITY; POPULATION DYNAMICS; VIROLOGY;

EID: 33846060282     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2006.01137.x     Document Type: Article
Times cited : (184)

References (44)
  • 1
    • 0033799760 scopus 로고    scopus 로고
    • The relative importance of competition and predation varies with productivity in a model community
    • Bohannan, B.J.M., and Lenski, R.E. (2000) The relative importance of competition and predation varies with productivity in a model community. Am Nat 156: 329-340.
    • (2000) Am Nat , vol.156 , pp. 329-340
    • Bohannan, B.J.M.1    Lenski, R.E.2
  • 2
    • 0036222111 scopus 로고    scopus 로고
    • Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries
    • Bouvier, T.C., and del Giorgio, P.A. (2002) Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries. Limnol Oceanogr 47: 453-470.
    • (2002) Limnol Oceanogr , vol.47 , pp. 453-470
    • Bouvier, T.C.1    del Giorgio, P.A.2
  • 3
    • 0038532917 scopus 로고    scopus 로고
    • Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports
    • Bouvier, T., and del Giorgio, P.A. (2003) Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): a quantitative review of published reports. FEMS Microbiol Ecol 44: 3-15.
    • (2003) FEMS Microbiol Ecol , vol.44 , pp. 3-15
    • Bouvier, T.1    del Giorgio, P.A.2
  • 4
    • 0034068899 scopus 로고    scopus 로고
    • Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter
    • Cottrell, M.T., and Kirchman, D.L. (2000) Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol 66: 1692-1697.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 1692-1697
    • Cottrell, M.T.1    Kirchman, D.L.2
  • 5
    • 0037250698 scopus 로고    scopus 로고
    • Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary
    • Cottrell, M.T., and Kirchman, D.L. (2003) Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary. Limnol Oceanogr 48: 168-178.
    • (2003) Limnol Oceanogr , vol.48 , pp. 168-178
    • Cottrell, M.T.1    Kirchman, D.L.2
  • 6
    • 0344172842 scopus 로고    scopus 로고
    • The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: Development and evaluation of a more comprehensive probe set
    • Daims, H., Bruhl, A., Amann, R., Schleifer, K.H., and Wagner, M. (1999) The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 22: 434-444.
    • (1999) Syst Appl Microbiol , vol.22 , pp. 434-444
    • Daims, H.1    Bruhl, A.2    Amann, R.3    Schleifer, K.H.4    Wagner, M.5
  • 7
    • 0034548858 scopus 로고    scopus 로고
    • Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques
    • Fuchs, B.M., Zubkov, M.V., Sahm, K., Burkill, P.H., and Amann, R. (2000) Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques. Environ Microbiol 2: 191-201.
    • (2000) Environ Microbiol , vol.2 , pp. 191-201
    • Fuchs, B.M.1    Zubkov, M.V.2    Sahm, K.3    Burkill, P.H.4    Amann, R.5
  • 8
    • 0033542481 scopus 로고    scopus 로고
    • Marine viruses and their biogeochemical and ecological effects
    • Fuhrman, J.A. (1999) Marine viruses and their biogeochemical and ecological effects. Nature 399: 541-548.
    • (1999) Nature , vol.399 , pp. 541-548
    • Fuhrman, J.A.1
  • 9
    • 0032471178 scopus 로고    scopus 로고
    • Marine microbial diversity studied via 16S rRNA sequences: Cloning results from coastal waters and counting of native archaea with fluorescent single cell probes
    • Fuhrman, J.A., and Ouverney, C.C. (1998) Marine microbial diversity studied via 16S rRNA sequences: cloning results from coastal waters and counting of native archaea with fluorescent single cell probes. Aquat Ecol 32: 3-15.
    • (1998) Aquat Ecol , vol.32 , pp. 3-15
    • Fuhrman, J.A.1    Ouverney, C.C.2
  • 10
    • 0037398111 scopus 로고    scopus 로고
    • Viral influence on aquatic bacterial communities
    • Fuhrman, J.A., and Schwalbach, M. (2003) Viral influence on aquatic bacterial communities. Biolog Bull 204: 192-195.
    • (2003) Biolog Bull , vol.204 , pp. 192-195
    • Fuhrman, J.A.1    Schwalbach, M.2
  • 11
    • 0001873849 scopus 로고
    • Viruses in marine planktonic systems
    • Fuhrman, J.A., and Suttle, C.A. (1993) Viruses in marine planktonic systems. Oceanography 6: 50-62.
    • (1993) Oceanography , vol.6 , pp. 50-62
    • Fuhrman, J.A.1    Suttle, C.A.2
  • 12
    • 0036161361 scopus 로고    scopus 로고
    • A transplant experiment to identify the factors controlling bacterial abundance, activity, production, and community composition in a eutrophic canyon-shaped reservoir
    • Gasol, J.M., Comerma, M., Garcia, J.C., Armengol, J., Casamayor, E.O., Kojecka, P., and Simek, K. (2002) A transplant experiment to identify the factors controlling bacterial abundance, activity, production, and community composition in a eutrophic canyon-shaped reservoir. Limnol Oceanogr 47: 62-77.
    • (2002) Limnol Oceanogr , vol.47 , pp. 62-77
    • Gasol, J.M.1    Comerma, M.2    Garcia, J.C.3    Armengol, J.4    Casamayor, E.O.5    Kojecka, P.6    Simek, K.7
  • 13
    • 0028970909 scopus 로고
    • Fluorescently labeled virus probes show that natural virus populations can control the structure of marine microbial communities
    • Hennes, K.P., Suttle, C.A., and Chan, A.M. (1995) Fluorescently labeled virus probes show that natural virus populations can control the structure of marine microbial communities. Appl Environ Microbiol 61: 3623-3627.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3623-3627
    • Hennes, K.P.1    Suttle, C.A.2    Chan, A.M.3
  • 14
    • 0347447341 scopus 로고    scopus 로고
    • Bacterial diversity in shallow oligotrophic marine benthos and overlying waters: Effects of virus infection, containment, and nutrient enrichment
    • Hewson, I., Vargo, G.A., and Fuhrman, J.A. (2003) Bacterial diversity in shallow oligotrophic marine benthos and overlying waters: effects of virus infection, containment, and nutrient enrichment. Microb Ecol 46: 322-336.
    • (2003) Microb Ecol , vol.46 , pp. 322-336
    • Hewson, I.1    Vargo, G.A.2    Fuhrman, J.A.3
  • 15
    • 0036207009 scopus 로고    scopus 로고
    • The ecology of Cytophaga-Flavobacteria in aquatic environments
    • Kirchman, D.L. (2002a) The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39: 91-100.
    • (2002) FEMS Microbiol Ecol , vol.39 , pp. 91-100
    • Kirchman, D.L.1
  • 16
    • 0037150394 scopus 로고    scopus 로고
    • Calculating microbial growth rates from data on production and standing stocks
    • Kirchman, D.L. (2002b) Calculating microbial growth rates from data on production and standing stocks. Mar Ecol Prog Ser 233: 303-306.
    • (2002) Mar Ecol Prog Ser , vol.233 , pp. 303-306
    • Kirchman, D.L.1
  • 17
    • 33845537520 scopus 로고
    • Dynamics of interactions between bacteria and virulent bacteriophage
    • Lenski, R.E. (1988) Dynamics of interactions between bacteria and virulent bacteriophage. Adv Microb Ecol 10: 1-44.
    • (1988) Adv Microb Ecol , vol.10 , pp. 1-44
    • Lenski, R.E.1
  • 18
    • 29144498686 scopus 로고    scopus 로고
    • Activity and phylogenetic diversity of high and low nucleic acid content, and ETS-active, bacterial cells in an upwelling ecosystem
    • Longnecker, K., Sherr, E.B., and Sherr, B.F. (2005) Activity and phylogenetic diversity of high and low nucleic acid content, and ETS-active, bacterial cells in an upwelling ecosystem. Appl Environ Microbiol 71: 7737-7749.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7737-7749
    • Longnecker, K.1    Sherr, E.B.2    Sherr, B.F.3
  • 19
    • 0031838852 scopus 로고    scopus 로고
    • Contrasts between marine and freshwater bacterial community composition: Analyses of communities in Lake George and six other Adirondack lakes
    • Methé, B.A., Hiorns, W.D., and Zehr, J.P. (1998) Contrasts between marine and freshwater bacterial community composition: analyses of communities in Lake George and six other Adirondack lakes. Limnol Oceanogr 43: 368-374.
    • (1998) Limnol Oceanogr , vol.43 , pp. 368-374
    • Methé, B.A.1    Hiorns, W.D.2    Zehr, J.P.3
  • 20
    • 0033784827 scopus 로고    scopus 로고
    • Bacterial growth rate and marine virus-host dynamics
    • Middelboe, M. (2000) Bacterial growth rate and marine virus-host dynamics. Microb Ecol 40: 114-124.
    • (2000) Microb Ecol , vol.40 , pp. 114-124
    • Middelboe, M.1
  • 21
    • 0035211598 scopus 로고    scopus 로고
    • Effects of bacteriophages on the population dynamics of four strains of pelagic marine bacteria
    • Middelboe, M., Hagstrom, A., Blackburn, N., Sinn, B., Fischer, U., Borch, N.H., et al. (2001) Effects of bacteriophages on the population dynamics of four strains of pelagic marine bacteria. Microb Ecol 42: 395-406.
    • (2001) Microb Ecol , vol.42 , pp. 395-406
    • Middelboe, M.1    Hagstrom, A.2    Blackburn, N.3    Sinn, B.4    Fischer, U.5    Borch, N.H.6
  • 22
    • 0027010743 scopus 로고
    • Viral dynamics - a model of the effects of size, shape, motion and abundance of single-celled planktonic organisms and other particles
    • Murray, A.G., and Jackson, G.A. (1992) Viral dynamics - a model of the effects of size, shape, motion and abundance of single-celled planktonic organisms and other particles. Mar Ecol Prog Ser 89: 103-116.
    • (1992) Mar Ecol Prog Ser , vol.89 , pp. 103-116
    • Murray, A.G.1    Jackson, G.A.2
  • 23
    • 23044525527 scopus 로고    scopus 로고
    • Enumeration of viruses
    • Noble, R.T. (2001) Enumeration of viruses. Methods Microbiol 30: 43-51.
    • (2001) Methods Microbiol , vol.30 , pp. 43-51
    • Noble, R.T.1
  • 24
    • 0032471781 scopus 로고    scopus 로고
    • Patterns and governing forces in aquatic microbial communities
    • Nold, S.C., and Zwart, G. (1998) Patterns and governing forces in aquatic microbial communities. Aquat Ecol 32: 17-35.
    • (1998) Aquat Ecol , vol.32 , pp. 17-35
    • Nold, S.C.1    Zwart, G.2
  • 25
    • 0033824875 scopus 로고    scopus 로고
    • Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems
    • Rappé, M.S., Vergin, K., and Giovannoni, S.J. (2000) Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems. FEMS Microbiol Ecol 33: 219-232.
    • (2000) FEMS Microbiol Ecol , vol.33 , pp. 219-232
    • Rappé, M.S.1    Vergin, K.2    Giovannoni, S.J.3
  • 26
    • 0036742591 scopus 로고    scopus 로고
    • Viral lysis of marine bacterioplankton: Implications for organic matter cycling and bacterial clonal composition
    • Riemann, L., and Middelboe, M. (2002) Viral lysis of marine bacterioplankton: implications for organic matter cycling and bacterial clonal composition. Ophelia 56: 57-68.
    • (2002) Ophelia , vol.56 , pp. 57-68
    • Riemann, L.1    Middelboe, M.2
  • 27
    • 0028172253 scopus 로고
    • In situ probing of Gram-positive bacteria with high DNA G+C content using 23S rRNA-targeted oligonucleotides
    • Roller, C., Wagner, M., Amann, R., Ludwig, W., and Schleifer, K.-H. (1994) In situ probing of Gram-positive bacteria with high DNA G+C content using 23S rRNA-targeted oligonucleotides. Microbiology 140: 2849-2858.
    • (1994) Microbiology , vol.140 , pp. 2849-2858
    • Roller, C.1    Wagner, M.2    Amann, R.3    Ludwig, W.4    Schleifer, K.-H.5
  • 29
    • 4143099227 scopus 로고    scopus 로고
    • Viral effects on bacterial community composition in marine plankton microcosms
    • Schwalbach, M.S., Hewson, I., and Fuhrman, J.A. (2004) Viral effects on bacterial community composition in marine plankton microcosms. Aquat Microb Ecol 34: 117-127.
    • (2004) Aquat Microb Ecol , vol.34 , pp. 117-127
    • Schwalbach, M.S.1    Hewson, I.2    Fuhrman, J.A.3
  • 30
    • 0035839321 scopus 로고    scopus 로고
    • Mesoscale variability in bacterial activity in the Northeast Pacific Ocean off Oregon, USA
    • Sherr, E.B., Sherr, B.F., and Cowles, T.J. (2001) Mesoscale variability in bacterial activity in the Northeast Pacific Ocean off Oregon, USA. Aquat Microb Ecol 25: 21-30.
    • (2001) Aquat Microb Ecol , vol.25 , pp. 21-30
    • Sherr, E.B.1    Sherr, B.F.2    Cowles, T.J.3
  • 31
    • 0032741450 scopus 로고    scopus 로고
    • Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir
    • Šimek, K., Kojecká, P., Nedoma, J., Hartman, P., Vrba, J., and Dolan, J.R. (1999) Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir. Limnol Oceanogr 44: 1634-1644.
    • (1999) Limnol Oceanogr , vol.44 , pp. 1634-1644
    • Šimek, K.1    Kojecká, P.2    Nedoma, J.3    Hartman, P.4    Vrba, J.5    Dolan, J.R.6
  • 32
    • 0035374573 scopus 로고    scopus 로고
    • Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir
    • Šimek, K., Pernthaler, J., Weinbauer, M.G., Hornak, K., Dolan, J.R., Nedoma, J., et al. (2001) Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl Environ Microbiol 67: 2723-2733.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2723-2733
    • Šimek, K.1    Pernthaler, J.2    Weinbauer, M.G.3    Hornak, K.4    Dolan, J.R.5    Nedoma, J.6
  • 33
    • 0001123060 scopus 로고
    • A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine
    • Smith, D.C., and Azam, F. (1992) A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine. Mar Microb Foodwebs 6: 107-114.
    • (1992) Mar Microb Foodwebs , vol.6 , pp. 107-114
    • Smith, D.C.1    Azam, F.2
  • 34
    • 0033826796 scopus 로고    scopus 로고
    • Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems
    • Thingstad, T.F. (2000) Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems. Limnol Oceanogr 45: 1320-1328.
    • (2000) Limnol Oceanogr , vol.45 , pp. 1320-1328
    • Thingstad, T.F.1
  • 35
    • 0002058563 scopus 로고    scopus 로고
    • Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand
    • Thingstad, T.F., and Lignell, R. (1997) Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand. Aquat Microb Ecol 13: 19-27.
    • (1997) Aquat Microb Ecol , vol.13 , pp. 19-27
    • Thingstad, T.F.1    Lignell, R.2
  • 36
    • 20744449838 scopus 로고    scopus 로고
    • Use of non-limiting substrates to increase size; a generic strategy to simultaneously optimize uptake and minimize predation in pelagic osmotrophs?
    • Thingstad, T.F., Ovreas, L., Egge, J.K., Lovdal, T., and Heldal, M. (2005) Use of non-limiting substrates to increase size; a generic strategy to simultaneously optimize uptake and minimize predation in pelagic osmotrophs? Ecol Lett 8: 675-682.
    • (2005) Ecol Lett , vol.8 , pp. 675-682
    • Thingstad, T.F.1    Ovreas, L.2    Egge, J.K.3    Lovdal, T.4    Heldal, M.5
  • 37
    • 0027329223 scopus 로고
    • Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater
    • Waterbury, J., and Valois, F. (1993) Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59: 3393-3399.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 3393-3399
    • Waterbury, J.1    Valois, F.2
  • 38
    • 0842266354 scopus 로고    scopus 로고
    • Are viruses driving microbial diversification and diversity?
    • Weinbauer, M.G., and Rassoulzadegan, F. (2004) Are viruses driving microbial diversification and diversity? Environ Microbiol 6: 1-11.
    • (2004) Environ Microbiol , vol.6 , pp. 1-11
    • Weinbauer, M.G.1    Rassoulzadegan, F.2
  • 39
    • 2342579410 scopus 로고    scopus 로고
    • Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures
    • Winter, C., Smit, A., Herndl, G.J., and Weinbauer, M.G. (2004) Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures. Appl Environ Microbiol 70: 804-813.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 804-813
    • Winter, C.1    Smit, A.2    Herndl, G.J.3    Weinbauer, M.G.4
  • 40
    • 20044364549 scopus 로고    scopus 로고
    • Linking bacterial richness with viral abundance and prokaryotic activity
    • Winter, C., Smit, A., Herndl, G.J., and Weinbauer, M.G. (2005) Linking bacterial richness with viral abundance and prokaryotic activity. Limnol Oceanogr 50: 968-977.
    • (2005) Limnol Oceanogr , vol.50 , pp. 968-977
    • Winter, C.1    Smit, A.2    Herndl, G.J.3    Weinbauer, M.G.4
  • 41
    • 0034053843 scopus 로고    scopus 로고
    • Virioplankton: Viruses in aquatic ecosystems
    • Wommack, K.E., and Colwell, R.R. (2000) Virioplankton: viruses in aquatic ecosystems. Microbiol Mol Biol Rev 64: 69-114.
    • (2000) Microbiol Mol Biol Rev , vol.64 , pp. 69-114
    • Wommack, K.E.1    Colwell, R.R.2
  • 42
    • 0030988067 scopus 로고    scopus 로고
    • A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer
    • Wright, T.D., Vergin, K.L., Boyd, P.W., and Giovannoni, S.J. (1997) A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer. Appl Environ Microbiol 63: 1441-1448.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1441-1448
    • Wright, T.D.1    Vergin, K.L.2    Boyd, P.W.3    Giovannoni, S.J.4
  • 43
    • 32044435609 scopus 로고    scopus 로고
    • Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments
    • Yokokawa, T., and Nagata, T. (2005) Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments. Appl Environ Microbiol 71: 6799-6807.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 6799-6807
    • Yokokawa, T.1    Nagata, T.2
  • 44
    • 4944253045 scopus 로고    scopus 로고
    • Growth rate of the major phylogenetic bacterial groups in the Delaware estuary
    • Yokokawa, T., Nagata, T., Cottrell, M.T., and Kirchman, D.L. (2004) Growth rate of the major phylogenetic bacterial groups in the Delaware estuary. Limnol Oceanogr 49: 1620-1629.
    • (2004) Limnol Oceanogr , vol.49 , pp. 1620-1629
    • Yokokawa, T.1    Nagata, T.2    Cottrell, M.T.3    Kirchman, D.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.