-
1
-
-
0033799760
-
The relative importance of competition and predation varies with productivity in a model community
-
Bohannan, B.J.M., and Lenski, R.E. (2000) The relative importance of competition and predation varies with productivity in a model community. Am Nat 156: 329-340.
-
(2000)
Am Nat
, vol.156
, pp. 329-340
-
-
Bohannan, B.J.M.1
Lenski, R.E.2
-
2
-
-
0036222111
-
Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries
-
Bouvier, T.C., and del Giorgio, P.A. (2002) Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries. Limnol Oceanogr 47: 453-470.
-
(2002)
Limnol Oceanogr
, vol.47
, pp. 453-470
-
-
Bouvier, T.C.1
del Giorgio, P.A.2
-
3
-
-
0038532917
-
Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports
-
Bouvier, T., and del Giorgio, P.A. (2003) Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): a quantitative review of published reports. FEMS Microbiol Ecol 44: 3-15.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 3-15
-
-
Bouvier, T.1
del Giorgio, P.A.2
-
4
-
-
0034068899
-
Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter
-
Cottrell, M.T., and Kirchman, D.L. (2000) Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol 66: 1692-1697.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1692-1697
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
5
-
-
0037250698
-
Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary
-
Cottrell, M.T., and Kirchman, D.L. (2003) Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary. Limnol Oceanogr 48: 168-178.
-
(2003)
Limnol Oceanogr
, vol.48
, pp. 168-178
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
6
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: Development and evaluation of a more comprehensive probe set
-
Daims, H., Bruhl, A., Amann, R., Schleifer, K.H., and Wagner, M. (1999) The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 22: 434-444.
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 434-444
-
-
Daims, H.1
Bruhl, A.2
Amann, R.3
Schleifer, K.H.4
Wagner, M.5
-
7
-
-
0034548858
-
Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques
-
Fuchs, B.M., Zubkov, M.V., Sahm, K., Burkill, P.H., and Amann, R. (2000) Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques. Environ Microbiol 2: 191-201.
-
(2000)
Environ Microbiol
, vol.2
, pp. 191-201
-
-
Fuchs, B.M.1
Zubkov, M.V.2
Sahm, K.3
Burkill, P.H.4
Amann, R.5
-
8
-
-
0033542481
-
Marine viruses and their biogeochemical and ecological effects
-
Fuhrman, J.A. (1999) Marine viruses and their biogeochemical and ecological effects. Nature 399: 541-548.
-
(1999)
Nature
, vol.399
, pp. 541-548
-
-
Fuhrman, J.A.1
-
9
-
-
0032471178
-
Marine microbial diversity studied via 16S rRNA sequences: Cloning results from coastal waters and counting of native archaea with fluorescent single cell probes
-
Fuhrman, J.A., and Ouverney, C.C. (1998) Marine microbial diversity studied via 16S rRNA sequences: cloning results from coastal waters and counting of native archaea with fluorescent single cell probes. Aquat Ecol 32: 3-15.
-
(1998)
Aquat Ecol
, vol.32
, pp. 3-15
-
-
Fuhrman, J.A.1
Ouverney, C.C.2
-
10
-
-
0037398111
-
Viral influence on aquatic bacterial communities
-
Fuhrman, J.A., and Schwalbach, M. (2003) Viral influence on aquatic bacterial communities. Biolog Bull 204: 192-195.
-
(2003)
Biolog Bull
, vol.204
, pp. 192-195
-
-
Fuhrman, J.A.1
Schwalbach, M.2
-
11
-
-
0001873849
-
Viruses in marine planktonic systems
-
Fuhrman, J.A., and Suttle, C.A. (1993) Viruses in marine planktonic systems. Oceanography 6: 50-62.
-
(1993)
Oceanography
, vol.6
, pp. 50-62
-
-
Fuhrman, J.A.1
Suttle, C.A.2
-
12
-
-
0036161361
-
A transplant experiment to identify the factors controlling bacterial abundance, activity, production, and community composition in a eutrophic canyon-shaped reservoir
-
Gasol, J.M., Comerma, M., Garcia, J.C., Armengol, J., Casamayor, E.O., Kojecka, P., and Simek, K. (2002) A transplant experiment to identify the factors controlling bacterial abundance, activity, production, and community composition in a eutrophic canyon-shaped reservoir. Limnol Oceanogr 47: 62-77.
-
(2002)
Limnol Oceanogr
, vol.47
, pp. 62-77
-
-
Gasol, J.M.1
Comerma, M.2
Garcia, J.C.3
Armengol, J.4
Casamayor, E.O.5
Kojecka, P.6
Simek, K.7
-
13
-
-
0028970909
-
Fluorescently labeled virus probes show that natural virus populations can control the structure of marine microbial communities
-
Hennes, K.P., Suttle, C.A., and Chan, A.M. (1995) Fluorescently labeled virus probes show that natural virus populations can control the structure of marine microbial communities. Appl Environ Microbiol 61: 3623-3627.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 3623-3627
-
-
Hennes, K.P.1
Suttle, C.A.2
Chan, A.M.3
-
14
-
-
0347447341
-
Bacterial diversity in shallow oligotrophic marine benthos and overlying waters: Effects of virus infection, containment, and nutrient enrichment
-
Hewson, I., Vargo, G.A., and Fuhrman, J.A. (2003) Bacterial diversity in shallow oligotrophic marine benthos and overlying waters: effects of virus infection, containment, and nutrient enrichment. Microb Ecol 46: 322-336.
-
(2003)
Microb Ecol
, vol.46
, pp. 322-336
-
-
Hewson, I.1
Vargo, G.A.2
Fuhrman, J.A.3
-
15
-
-
0036207009
-
The ecology of Cytophaga-Flavobacteria in aquatic environments
-
Kirchman, D.L. (2002a) The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39: 91-100.
-
(2002)
FEMS Microbiol Ecol
, vol.39
, pp. 91-100
-
-
Kirchman, D.L.1
-
16
-
-
0037150394
-
Calculating microbial growth rates from data on production and standing stocks
-
Kirchman, D.L. (2002b) Calculating microbial growth rates from data on production and standing stocks. Mar Ecol Prog Ser 233: 303-306.
-
(2002)
Mar Ecol Prog Ser
, vol.233
, pp. 303-306
-
-
Kirchman, D.L.1
-
17
-
-
33845537520
-
Dynamics of interactions between bacteria and virulent bacteriophage
-
Lenski, R.E. (1988) Dynamics of interactions between bacteria and virulent bacteriophage. Adv Microb Ecol 10: 1-44.
-
(1988)
Adv Microb Ecol
, vol.10
, pp. 1-44
-
-
Lenski, R.E.1
-
18
-
-
29144498686
-
Activity and phylogenetic diversity of high and low nucleic acid content, and ETS-active, bacterial cells in an upwelling ecosystem
-
Longnecker, K., Sherr, E.B., and Sherr, B.F. (2005) Activity and phylogenetic diversity of high and low nucleic acid content, and ETS-active, bacterial cells in an upwelling ecosystem. Appl Environ Microbiol 71: 7737-7749.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7737-7749
-
-
Longnecker, K.1
Sherr, E.B.2
Sherr, B.F.3
-
19
-
-
0031838852
-
Contrasts between marine and freshwater bacterial community composition: Analyses of communities in Lake George and six other Adirondack lakes
-
Methé, B.A., Hiorns, W.D., and Zehr, J.P. (1998) Contrasts between marine and freshwater bacterial community composition: analyses of communities in Lake George and six other Adirondack lakes. Limnol Oceanogr 43: 368-374.
-
(1998)
Limnol Oceanogr
, vol.43
, pp. 368-374
-
-
Methé, B.A.1
Hiorns, W.D.2
Zehr, J.P.3
-
20
-
-
0033784827
-
Bacterial growth rate and marine virus-host dynamics
-
Middelboe, M. (2000) Bacterial growth rate and marine virus-host dynamics. Microb Ecol 40: 114-124.
-
(2000)
Microb Ecol
, vol.40
, pp. 114-124
-
-
Middelboe, M.1
-
21
-
-
0035211598
-
Effects of bacteriophages on the population dynamics of four strains of pelagic marine bacteria
-
Middelboe, M., Hagstrom, A., Blackburn, N., Sinn, B., Fischer, U., Borch, N.H., et al. (2001) Effects of bacteriophages on the population dynamics of four strains of pelagic marine bacteria. Microb Ecol 42: 395-406.
-
(2001)
Microb Ecol
, vol.42
, pp. 395-406
-
-
Middelboe, M.1
Hagstrom, A.2
Blackburn, N.3
Sinn, B.4
Fischer, U.5
Borch, N.H.6
-
22
-
-
0027010743
-
Viral dynamics - a model of the effects of size, shape, motion and abundance of single-celled planktonic organisms and other particles
-
Murray, A.G., and Jackson, G.A. (1992) Viral dynamics - a model of the effects of size, shape, motion and abundance of single-celled planktonic organisms and other particles. Mar Ecol Prog Ser 89: 103-116.
-
(1992)
Mar Ecol Prog Ser
, vol.89
, pp. 103-116
-
-
Murray, A.G.1
Jackson, G.A.2
-
23
-
-
23044525527
-
Enumeration of viruses
-
Noble, R.T. (2001) Enumeration of viruses. Methods Microbiol 30: 43-51.
-
(2001)
Methods Microbiol
, vol.30
, pp. 43-51
-
-
Noble, R.T.1
-
24
-
-
0032471781
-
Patterns and governing forces in aquatic microbial communities
-
Nold, S.C., and Zwart, G. (1998) Patterns and governing forces in aquatic microbial communities. Aquat Ecol 32: 17-35.
-
(1998)
Aquat Ecol
, vol.32
, pp. 17-35
-
-
Nold, S.C.1
Zwart, G.2
-
25
-
-
0033824875
-
Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems
-
Rappé, M.S., Vergin, K., and Giovannoni, S.J. (2000) Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems. FEMS Microbiol Ecol 33: 219-232.
-
(2000)
FEMS Microbiol Ecol
, vol.33
, pp. 219-232
-
-
Rappé, M.S.1
Vergin, K.2
Giovannoni, S.J.3
-
26
-
-
0036742591
-
Viral lysis of marine bacterioplankton: Implications for organic matter cycling and bacterial clonal composition
-
Riemann, L., and Middelboe, M. (2002) Viral lysis of marine bacterioplankton: implications for organic matter cycling and bacterial clonal composition. Ophelia 56: 57-68.
-
(2002)
Ophelia
, vol.56
, pp. 57-68
-
-
Riemann, L.1
Middelboe, M.2
-
27
-
-
0028172253
-
In situ probing of Gram-positive bacteria with high DNA G+C content using 23S rRNA-targeted oligonucleotides
-
Roller, C., Wagner, M., Amann, R., Ludwig, W., and Schleifer, K.-H. (1994) In situ probing of Gram-positive bacteria with high DNA G+C content using 23S rRNA-targeted oligonucleotides. Microbiology 140: 2849-2858.
-
(1994)
Microbiology
, vol.140
, pp. 2849-2858
-
-
Roller, C.1
Wagner, M.2
Amann, R.3
Ludwig, W.4
Schleifer, K.-H.5
-
28
-
-
8144228665
-
Movement of viruses between biomes
-
Sano, E., Carlson, S., Wegley, L., and Rohwer, F. (2004) Movement of viruses between biomes. Appl Environ Microbiol 70: 5842-5846.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5842-5846
-
-
Sano, E.1
Carlson, S.2
Wegley, L.3
Rohwer, F.4
-
29
-
-
4143099227
-
Viral effects on bacterial community composition in marine plankton microcosms
-
Schwalbach, M.S., Hewson, I., and Fuhrman, J.A. (2004) Viral effects on bacterial community composition in marine plankton microcosms. Aquat Microb Ecol 34: 117-127.
-
(2004)
Aquat Microb Ecol
, vol.34
, pp. 117-127
-
-
Schwalbach, M.S.1
Hewson, I.2
Fuhrman, J.A.3
-
30
-
-
0035839321
-
Mesoscale variability in bacterial activity in the Northeast Pacific Ocean off Oregon, USA
-
Sherr, E.B., Sherr, B.F., and Cowles, T.J. (2001) Mesoscale variability in bacterial activity in the Northeast Pacific Ocean off Oregon, USA. Aquat Microb Ecol 25: 21-30.
-
(2001)
Aquat Microb Ecol
, vol.25
, pp. 21-30
-
-
Sherr, E.B.1
Sherr, B.F.2
Cowles, T.J.3
-
31
-
-
0032741450
-
Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir
-
Šimek, K., Kojecká, P., Nedoma, J., Hartman, P., Vrba, J., and Dolan, J.R. (1999) Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir. Limnol Oceanogr 44: 1634-1644.
-
(1999)
Limnol Oceanogr
, vol.44
, pp. 1634-1644
-
-
Šimek, K.1
Kojecká, P.2
Nedoma, J.3
Hartman, P.4
Vrba, J.5
Dolan, J.R.6
-
32
-
-
0035374573
-
Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir
-
Šimek, K., Pernthaler, J., Weinbauer, M.G., Hornak, K., Dolan, J.R., Nedoma, J., et al. (2001) Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl Environ Microbiol 67: 2723-2733.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2723-2733
-
-
Šimek, K.1
Pernthaler, J.2
Weinbauer, M.G.3
Hornak, K.4
Dolan, J.R.5
Nedoma, J.6
-
33
-
-
0001123060
-
A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine
-
Smith, D.C., and Azam, F. (1992) A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine. Mar Microb Foodwebs 6: 107-114.
-
(1992)
Mar Microb Foodwebs
, vol.6
, pp. 107-114
-
-
Smith, D.C.1
Azam, F.2
-
34
-
-
0033826796
-
Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems
-
Thingstad, T.F. (2000) Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems. Limnol Oceanogr 45: 1320-1328.
-
(2000)
Limnol Oceanogr
, vol.45
, pp. 1320-1328
-
-
Thingstad, T.F.1
-
35
-
-
0002058563
-
Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand
-
Thingstad, T.F., and Lignell, R. (1997) Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand. Aquat Microb Ecol 13: 19-27.
-
(1997)
Aquat Microb Ecol
, vol.13
, pp. 19-27
-
-
Thingstad, T.F.1
Lignell, R.2
-
36
-
-
20744449838
-
Use of non-limiting substrates to increase size; a generic strategy to simultaneously optimize uptake and minimize predation in pelagic osmotrophs?
-
Thingstad, T.F., Ovreas, L., Egge, J.K., Lovdal, T., and Heldal, M. (2005) Use of non-limiting substrates to increase size; a generic strategy to simultaneously optimize uptake and minimize predation in pelagic osmotrophs? Ecol Lett 8: 675-682.
-
(2005)
Ecol Lett
, vol.8
, pp. 675-682
-
-
Thingstad, T.F.1
Ovreas, L.2
Egge, J.K.3
Lovdal, T.4
Heldal, M.5
-
37
-
-
0027329223
-
Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater
-
Waterbury, J., and Valois, F. (1993) Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59: 3393-3399.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 3393-3399
-
-
Waterbury, J.1
Valois, F.2
-
38
-
-
0842266354
-
Are viruses driving microbial diversification and diversity?
-
Weinbauer, M.G., and Rassoulzadegan, F. (2004) Are viruses driving microbial diversification and diversity? Environ Microbiol 6: 1-11.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1-11
-
-
Weinbauer, M.G.1
Rassoulzadegan, F.2
-
39
-
-
2342579410
-
Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures
-
Winter, C., Smit, A., Herndl, G.J., and Weinbauer, M.G. (2004) Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures. Appl Environ Microbiol 70: 804-813.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 804-813
-
-
Winter, C.1
Smit, A.2
Herndl, G.J.3
Weinbauer, M.G.4
-
40
-
-
20044364549
-
Linking bacterial richness with viral abundance and prokaryotic activity
-
Winter, C., Smit, A., Herndl, G.J., and Weinbauer, M.G. (2005) Linking bacterial richness with viral abundance and prokaryotic activity. Limnol Oceanogr 50: 968-977.
-
(2005)
Limnol Oceanogr
, vol.50
, pp. 968-977
-
-
Winter, C.1
Smit, A.2
Herndl, G.J.3
Weinbauer, M.G.4
-
41
-
-
0034053843
-
Virioplankton: Viruses in aquatic ecosystems
-
Wommack, K.E., and Colwell, R.R. (2000) Virioplankton: viruses in aquatic ecosystems. Microbiol Mol Biol Rev 64: 69-114.
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 69-114
-
-
Wommack, K.E.1
Colwell, R.R.2
-
42
-
-
0030988067
-
A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer
-
Wright, T.D., Vergin, K.L., Boyd, P.W., and Giovannoni, S.J. (1997) A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer. Appl Environ Microbiol 63: 1441-1448.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 1441-1448
-
-
Wright, T.D.1
Vergin, K.L.2
Boyd, P.W.3
Giovannoni, S.J.4
-
43
-
-
32044435609
-
Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments
-
Yokokawa, T., and Nagata, T. (2005) Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments. Appl Environ Microbiol 71: 6799-6807.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 6799-6807
-
-
Yokokawa, T.1
Nagata, T.2
-
44
-
-
4944253045
-
Growth rate of the major phylogenetic bacterial groups in the Delaware estuary
-
Yokokawa, T., Nagata, T., Cottrell, M.T., and Kirchman, D.L. (2004) Growth rate of the major phylogenetic bacterial groups in the Delaware estuary. Limnol Oceanogr 49: 1620-1629.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 1620-1629
-
-
Yokokawa, T.1
Nagata, T.2
Cottrell, M.T.3
Kirchman, D.L.4
|