메뉴 건너뛰기




Volumn 13, Issue 1, 2007, Pages 129-137

Cap- and initiator tRNA-dependent initiation of TYMV polyprotein synthesis by ribosomes: Evaluation of the Trojan horse model for TYMV RNA translation

Author keywords

Edeine inhibition; In vitro translation; Ribosome toe printing; Translation initiation; Valylation; Viral tRNA like structure; Wheat germ extract

Indexed keywords

EDEINE; POLYPROTEIN; TRANSFER RNA; VIRUS RNA;

EID: 33845879617     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.244407     Document Type: Article
Times cited : (22)

References (32)
  • 1
    • 0037428153 scopus 로고    scopus 로고
    • Entrapping ribosomes for viral translation: TRNA mimicry as a molecular Trojan horse
    • Barends, S., Bink, H.H., van den Worm, S.H., Pleij, C.W., and Kraal, B. 2003. Entrapping ribosomes for viral translation: tRNA mimicry as a molecular Trojan horse. Cell 112: 123-129.
    • (2003) Cell , vol.112 , pp. 123-129
    • Barends, S.1    Bink, H.H.2    van den Worm, S.H.3    Pleij, C.W.4    Kraal, B.5
  • 3
    • 0026603668 scopus 로고
    • Expression of ORF-69 of turnip yellow mosaic virus is necessary for viral spread in plants
    • Bozarth, C.S., Weiland, J.J., and Dreher, T.W. 1992. Expression of ORF-69 of turnip yellow mosaic virus is necessary for viral spread in plants. Virology 187: 124-130.
    • (1992) Virology , vol.187 , pp. 124-130
    • Bozarth, C.S.1    Weiland, J.J.2    Dreher, T.W.3
  • 4
    • 0025912370 scopus 로고
    • Proteolytic maturation of the 206-kDa nonstructural protein encoded by turnip yellow mosaic virus RNA
    • Bransom, K.L., Weiland, J.J., and Dreher, T.W. 1991. Proteolytic maturation of the 206-kDa nonstructural protein encoded by turnip yellow mosaic virus RNA. Virology 184: 351-358.
    • (1991) Virology , vol.184 , pp. 351-358
    • Bransom, K.L.1    Weiland, J.J.2    Dreher, T.W.3
  • 5
    • 4544226034 scopus 로고    scopus 로고
    • Pathogen profile. Turnip yellow mosaic virus: Transfer RNA mimicry, chloroplasts and a C-rich genome
    • Dreher, T.W. 2004. Pathogen profile. Turnip yellow mosaic virus: Transfer RNA mimicry, chloroplasts and a C-rich genome. Mol. Plant Pathol. 5: 367-375.
    • (2004) Mol. Plant Pathol , vol.5 , pp. 367-375
    • Dreher, T.W.1
  • 6
    • 0032188861 scopus 로고    scopus 로고
    • Transfer RNA mimicry among tymoviral genomic RNAs ranges from highly efficient to vestigial
    • Dreher, T.W. and Goodwin, J.B. 1998. Transfer RNA mimicry among tymoviral genomic RNAs ranges from highly efficient to vestigial. Nucleic Acids Res. 26: 4356-4364.
    • (1998) Nucleic Acids Res , vol.26 , pp. 4356-4364
    • Dreher, T.W.1    Goodwin, J.B.2
  • 7
    • 0033534614 scopus 로고    scopus 로고
    • Quantitative assessment of EF-1a.GTP binding to aminoacyl-tRNAs, aminoacyl-viral RNA, and tRNA shows close correspondence to the RNA binding properties of EF-Tu
    • Dreher, T.W., Uhlenbeck, O.C., and Browning, K.S. 1999. Quantitative assessment of EF-1a.GTP binding to aminoacyl-tRNAs, aminoacyl-viral RNA, and tRNA shows close correspondence to the RNA binding properties of EF-Tu. J. Biol. Chem. 274: 666-672.
    • (1999) J. Biol. Chem , vol.274 , pp. 666-672
    • Dreher, T.W.1    Uhlenbeck, O.C.2    Browning, K.S.3
  • 8
    • 0034255244 scopus 로고    scopus 로고
    • The role of 5′-leader length, secondary structure and PABP concentration on cap and poly(A) tail function during translation in Xenopus oocytes
    • Gallie, D.R., Ling, J., Niepel, M., Morley, S.J., and Pain, V.M. 2000. The role of 5′-leader length, secondary structure and PABP concentration on cap and poly(A) tail function during translation in Xenopus oocytes. Nucleic Acids Res. 28: 2943-2953.
    • (2000) Nucleic Acids Res , vol.28 , pp. 2943-2953
    • Gallie, D.R.1    Ling, J.2    Niepel, M.3    Morley, S.J.4    Pain, V.M.5
  • 9
    • 0031592572 scopus 로고    scopus 로고
    • Characterization of chimeric turnip yellow mosaic virus genomes that are infectious in the absence of aminoacylation
    • Goodwin, J.B., Skuzeski, J.M., and Dreher, T.W. 1997. Characterization of chimeric turnip yellow mosaic virus genomes that are infectious in the absence of aminoacylation. Virology 230: 113-124.
    • (1997) Virology , vol.230 , pp. 113-124
    • Goodwin, J.B.1    Skuzeski, J.M.2    Dreher, T.W.3
  • 10
    • 0015818803 scopus 로고
    • TYMV valyl-RNA as an amino-acid donor in protein biosynthesis
    • Haenni, A.L., Prochiantz, A., Bernard, O., and Chapeville, F. 1973. TYMV valyl-RNA as an amino-acid donor in protein biosynthesis. Nat. New Biol. 241: 166-168.
    • (1973) Nat. New Biol , vol.241 , pp. 166-168
    • Haenni, A.L.1    Prochiantz, A.2    Bernard, O.3    Chapeville, F.4
  • 12
    • 33646791554 scopus 로고    scopus 로고
    • Divergent IRES elements in invertebrates
    • Jan, E. 2005. Divergent IRES elements in invertebrates. Virus Res. 119: 16-28.
    • (2005) Virus Res , vol.119 , pp. 16-28
    • Jan, E.1
  • 13
    • 0021940494 scopus 로고
    • A peculiar property of aspartyl-tRNA synthetase from bakers' yeast: Chemical modification of the protein by the enzymatically synthesized aminoacyl adenylate
    • Kern, D., Lorber, B., Boulanger, Y., and Giegé, R. 1985. A peculiar property of aspartyl-tRNA synthetase from bakers' yeast: Chemical modification of the protein by the enzymatically synthesized aminoacyl adenylate. Biochemistry 24: 1321-1332.
    • (1985) Biochemistry , vol.24 , pp. 1321-1332
    • Kern, D.1    Lorber, B.2    Boulanger, Y.3    Giegé, R.4
  • 14
    • 20044396168 scopus 로고    scopus 로고
    • Nemesia ring necrosis virus: A new tymovirus with a genomic RNA having a histidylatable tobamovirus-like 3′ end
    • Koenig, R., Barends, S., Gultyaev, A.P., Lesemann, D.E., Vetten, H.J., Loss, S., and Pleij, C.W. 2005. Nemesia ring necrosis virus: A new tymovirus with a genomic RNA having a histidylatable tobamovirus-like 3′ end. J. Gen. Virol. 86: 1827-1833.
    • (2005) J. Gen. Virol , vol.86 , pp. 1827-1833
    • Koenig, R.1    Barends, S.2    Gultyaev, A.P.3    Lesemann, D.E.4    Vetten, H.J.5    Loss, S.6    Pleij, C.W.7
  • 15
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • Kozak, M. 2002. Pushing the limits of the scanning mechanism for initiation of translation. Gene 299: 1-34.
    • (2002) Gene , vol.299 , pp. 1-34
    • Kozak, M.1
  • 16
    • 0018198353 scopus 로고
    • Migration of 40 S ribosomal subunits on messenger RNA in the presence of edeine
    • Kozak, M. and Shatkin, A.J. 1978. Migration of 40 S ribosomal subunits on messenger RNA in the presence of edeine. J. Biol. Chem. 253: 6568-6577.
    • (1978) J. Biol. Chem , vol.253 , pp. 6568-6577
    • Kozak, M.1    Shatkin, A.J.2
  • 17
    • 0027296795 scopus 로고
    • A phylogenetically conserved sequence within viral 39 untranslated RNA pseudoknots regulates translation
    • Leathers, V., Tanguay, R., Kobayashi, M., and Gallie, D.R. 1993. A phylogenetically conserved sequence within viral 39 untranslated RNA pseudoknots regulates translation. Mol. Cell. Biol. 13: 5331-5347.
    • (1993) Mol. Cell. Biol , vol.13 , pp. 5331-5347
    • Leathers, V.1    Tanguay, R.2    Kobayashi, M.3    Gallie, D.R.4
  • 18
    • 1642328508 scopus 로고    scopus 로고
    • The tRNA-like structure of Turnip yellow mosaic virus RNA is a 39-translational enhancer
    • Matsuda, D. and Dreher, T.W. 2004. The tRNA-like structure of Turnip yellow mosaic virus RNA is a 39-translational enhancer. Virology 321: 36-46.
    • (2004) Virology , vol.321 , pp. 36-46
    • Matsuda, D.1    Dreher, T.W.2
  • 19
    • 33745614073 scopus 로고    scopus 로고
    • Close spacing of AUG initiation codons confers dicistronic character on a eukaryotic mRNA
    • Matsuda, D. and Dreher, T.W. 2006. Close spacing of AUG initiation codons confers dicistronic character on a eukaryotic mRNA. RNA 12: 1338-1349.
    • (2006) RNA , vol.12 , pp. 1338-1349
    • Matsuda, D.1    Dreher, T.W.2
  • 20
    • 4143129900 scopus 로고    scopus 로고
    • Expression of the two nested overlapping reading frames of turnip yellow mosaic virus RNA is enhanced by a 5′ cap and by 5′ and 3′ viral sequences
    • Matsuda, D., Bauer, L., Tinnesand, K., and Dreher, T.W. 2004a. Expression of the two nested overlapping reading frames of turnip yellow mosaic virus RNA is enhanced by a 5′ cap and by 5′ and 3′ viral sequences. J. Virol. 78: 9325-9335.
    • (2004) J. Virol , vol.78 , pp. 9325-9335
    • Matsuda, D.1    Bauer, L.2    Tinnesand, K.3    Dreher, T.W.4
  • 21
    • 1642317212 scopus 로고    scopus 로고
    • eEF1A binding to aminoacylated viral RNA represses minus strand synthesis by TYMV RNA-dependent RNA polymerase
    • Matsuda, D., Yoshinari, S., and Dreher, T.W. 2004b. eEF1A binding to aminoacylated viral RNA represses minus strand synthesis by TYMV RNA-dependent RNA polymerase. Virology 321: 47-56.
    • (2004) Virology , vol.321 , pp. 47-56
    • Matsuda, D.1    Yoshinari, S.2    Dreher, T.W.3
  • 22
    • 0034644749 scopus 로고    scopus 로고
    • Cap-poly(A) synergy in mammalian cell-free extracts. Investigation of the requirements for poly(A)-mediated stimulation of translation initiation
    • Michel, Y.M., Poncet, D., Piron, M., Kean, K.M., and Borman, A.M. 2000. Cap-poly(A) synergy in mammalian cell-free extracts. Investigation of the requirements for poly(A)-mediated stimulation of translation initiation. J. Biol. Chem. 275: 32268-32276.
    • (2000) J. Biol. Chem , vol.275 , pp. 32268-32276
    • Michel, Y.M.1    Poncet, D.2    Piron, M.3    Kean, K.M.4    Borman, A.M.5
  • 23
    • 0018192288 scopus 로고
    • GTP hydrolysis during methionyl-tRNAf binding to 40 S ribosomal subunits and the site of edeine inhibition
    • Odom, O.W., Kramer, G., Henderson, A.B., Pinphanichakarn, P., and Hardesty, B. 1978. GTP hydrolysis during methionyl-tRNAf binding to 40 S ribosomal subunits and the site of edeine inhibition. J. Biol. Chem. 253: 1807-1816.
    • (1978) J. Biol. Chem , vol.253 , pp. 1807-1816
    • Odom, O.W.1    Kramer, G.2    Henderson, A.B.3    Pinphanichakarn, P.4    Hardesty, B.5
  • 24
    • 0037439060 scopus 로고    scopus 로고
    • Translation elongation after assembly of ribosomes on the cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA
    • Pestova, T.V. and Hellen, C.U. 2003. Translation elongation after assembly of ribosomes on the cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA. Genes & Dev. 17: 181-186.
    • (2003) Genes & Dev , vol.17 , pp. 181-186
    • Pestova, T.V.1    Hellen, C.U.2
  • 25
    • 29444448041 scopus 로고    scopus 로고
    • Idiosynchratic behaviour of tRNA-like structures in translation of plant viral RNA genomes
    • Rudinger-Thirion, J., Olsthoorn, R.C.L., Giegé, R., and Barends, S. 2005. Idiosynchratic behaviour of tRNA-like structures in translation of plant viral RNA genomes. J. Mol. Biol. 355: 873-878.
    • (2005) J. Mol. Biol , vol.355 , pp. 873-878
    • Rudinger-Thirion, J.1    Olsthoorn, R.C.L.2    Giegé, R.3    Barends, S.4
  • 26
    • 0034652349 scopus 로고    scopus 로고
    • Methionine-independent initiation of translation in the capsid protein of an insect RNA virus
    • Sasaki, J. and Nakashima, N. 2000. Methionine-independent initiation of translation in the capsid protein of an insect RNA virus. Proc. Natl. Acad. Sci. 97: 1512-1515.
    • (2000) Proc. Natl. Acad. Sci , vol.97 , pp. 1512-1515
    • Sasaki, J.1    Nakashima, N.2
  • 27
    • 0026058679 scopus 로고
    • Turnip yellow mosaic virus RNAs with anticodon loop substitutions that result in decreased valylation fail to replicate efficiently
    • Tsai, C.-H. and Dreher, T.W. 1991. Turnip yellow mosaic virus RNAs with anticodon loop substitutions that result in decreased valylation fail to replicate efficiently. J Virol. 65: 3060-3067.
    • (1991) J Virol , vol.65 , pp. 3060-3067
    • Tsai, C.-H.1    Dreher, T.W.2
  • 28
    • 0029655282 scopus 로고    scopus 로고
    • Translational efficiency is regulated by the length of the 39 untranslated region
    • Tanguay, R.L. and Gallie, D.R. 1996. Translational efficiency is regulated by the length of the 39 untranslated region. Mol. Cell. Biol. 16: 146-156.
    • (1996) Mol. Cell. Biol , vol.16 , pp. 146-156
    • Tanguay, R.L.1    Gallie, D.R.2
  • 29
    • 0030745618 scopus 로고    scopus 로고
    • Ribosome stalling is responsible for arginine-specific translational attenuation in Neurospora crassa
    • Wang, Z. and Sachs, M.S. 1997. Ribosome stalling is responsible for arginine-specific translational attenuation in Neurospora crassa. Mol. Cell. Biol. 17: 4904-4913.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 4904-4913
    • Wang, Z.1    Sachs, M.S.2
  • 30
    • 0024979026 scopus 로고
    • Infectious TYMV RNA from cloned cDNA: Effects in vitro and in vivo of point substitutions in the initiation codons of two extensively overlapping ORFs
    • Weiland, J.J. and Dreher, T.W. 1989. Infectious TYMV RNA from cloned cDNA: Effects in vitro and in vivo of point substitutions in the initiation codons of two extensively overlapping ORFs. Nucleic Acids Res. 17: 4675-4687.
    • (1989) Nucleic Acids Res , vol.17 , pp. 4675-4687
    • Weiland, J.J.1    Dreher, T.W.2
  • 31
    • 0034682720 scopus 로고    scopus 로고
    • Initiation of protein synthesis from the A site of the ribosome
    • Wilson, J.E., Pestova, T.V., Hellen, C.U., and Sarnow, P. 2000a. Initiation of protein synthesis from the A site of the ribosome. Cell 102: 511-520.
    • (2000) Cell , vol.102 , pp. 511-520
    • Wilson, J.E.1    Pestova, T.V.2    Hellen, C.U.3    Sarnow, P.4
  • 32
    • 0033920258 scopus 로고    scopus 로고
    • Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites
    • Wilson, J.E., Powell, M.J., Hoover, S.E., and Sarnow, P. 2000b. Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites. Mol. Cell. Biol. 20: 4990-4999.
    • (2000) Mol. Cell. Biol , vol.20 , pp. 4990-4999
    • Wilson, J.E.1    Powell, M.J.2    Hoover, S.E.3    Sarnow, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.