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Volumn 86, Issue 6, 2005, Pages 1827-1833

Nemesia ring necrosis virus: A new tymovirus with a genomic RNA having a histidylatable tobamovirus-like 3′ end

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; GENOMIC RNA; HISTIDINE; NUCLEOTIDE; TRANSFER RNA; VALINE; VIRUS RNA;

EID: 20044396168     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.80916-0     Document Type: Article
Times cited : (25)

References (42)
  • 1
    • 0037428153 scopus 로고    scopus 로고
    • Entrapping ribosomes for viral translation: tRNA mimicry as a molecular Trojan horse
    • Barends, S., Bink, H. H. J., van den Worm, S. H. E., Pleij, C. W. A. & Kraal, B. (2003). Entrapping ribosomes for viral translation: tRNA mimicry as a molecular Trojan horse. Cell 112, 123-129.
    • (2003) Cell , vol.112 , pp. 123-129
    • Barends, S.1    Bink, H.H.J.2    van den Worm, S.H.E.3    Pleij, C.W.A.4    Kraal, B.5
  • 3
    • 0037108909 scopus 로고    scopus 로고
    • Protonation of non-Watson-Crick base pairs and encapsidation of turnip yellow mosaic virus RNA
    • Bink, H. H. J., Hellendoorn, K., van der Meulen, J. & Pleij, C. W. A. (2002). Protonation of non-Watson-Crick base pairs and encapsidation of turnip yellow mosaic virus RNA. Proc Natl Acad Sci U S A 99, 13465-13470.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 13465-13470
    • Bink, H.H.J.1    Hellendoorn, K.2    van der Meulen, J.3    Pleij, C.W.A.4
  • 4
    • 0033956269 scopus 로고    scopus 로고
    • Heterogeneity in the 3′-terminal untranslated region of tobacco mild green mosaic tobamoviruses from Nicotiana glauca resulting in variants with three or six pseudoknots
    • Bodaghi, S., Ngon A Yassi, M. & Dodds, J. A. (2000). Heterogeneity in the 3′-terminal untranslated region of tobacco mild green mosaic tobamoviruses from Nicotiana glauca resulting in variants with three or six pseudoknots. J Gen Virol 81, 577-586.
    • (2000) J. Gen. Virol. , vol.81 , pp. 577-586
    • Bodaghi, S.1    Ngon, A.2    Yassi, M.3    Dodds, J.A.4
  • 5
    • 0026603668 scopus 로고
    • Expression of ORF-69 of turnip yellow mosaic virus is necessary for viral spread in plants
    • Bozarth, C. S., Weiland, J. J. & Dreher, T. W. (1992). Expression of ORF-69 of turnip yellow mosaic virus is necessary for viral spread in plants. Virology 187, 124-130.
    • (1992) Virology , vol.187 , pp. 124-130
    • Bozarth, C.S.1    Weiland, J.J.2    Dreher, T.W.3
  • 6
    • 0028237497 scopus 로고
    • Identification of the essential cysteine and histidine residues of the turnip yellow mosaic virus protease
    • Bransom, K. L. & Dreher, T. W. (1994). Identification of the essential cysteine and histidine residues of the turnip yellow mosaic virus protease. Virology 198, 148-154.
    • (1994) Virology , vol.198 , pp. 148-154
    • Bransom, K.L.1    Dreher, T.W.2
  • 7
    • 0029963275 scopus 로고    scopus 로고
    • Identification of the cleavage site recognized by the turnip yellow mosaic virus protease
    • Bransom, K. L., Wallace, S. E. & Dreher, T. W. (1996). Identification of the cleavage site recognized by the turnip yellow mosaic virus protease. Virology 217, 404-406.
    • (1996) Virology , vol.217 , pp. 404-406
    • Bransom, K.L.1    Wallace, S.E.2    Dreher, T.W.3
  • 8
    • 2442604466 scopus 로고    scopus 로고
    • Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression
    • Chen, J., Li, W. X., Xie, D., Peng, J. R. & Ding, S. W. (2004). Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression. Plant Cell 16, 1302-1313.
    • (2004) Plant Cell , vol.16 , pp. 1302-1313
    • Chen, J.1    Li, W.X.2    Xie, D.3    Peng, J.R.4    Ding, S.W.5
  • 9
    • 3543054869 scopus 로고    scopus 로고
    • A rapid method for sequencing the 5′- and 3′-termini of dsRNA viral templates using RLM-Race
    • Coutts, R. H. A. & Livieratos, I. C. (2003). A rapid method for sequencing the 5′- and 3′-termini of dsRNA viral templates using RLM-Race. J Phytopathol 151, 525-527.
    • (2003) J. Phytopathol. , vol.151 , pp. 525-527
    • Coutts, R.H.A.1    Livieratos, I.C.2
  • 10
    • 0021760092 scopus 로고
    • A comprehensive set of sequence analysis programs for the VAX
    • Devereux, J., Haeberli, P. & Smithies, O. (1984). A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12, 387-395.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 11
    • 0001708902 scopus 로고
    • The use of bentonite in the purification of plant viruses
    • Dunn, D. B. & Hitchborn, J. H. (1965). The use of bentonite in the purification of plant viruses. Virology 25, 171-192.
    • (1965) Virology , vol.25 , pp. 171-192
    • Dunn, D.B.1    Hitchborn, J.H.2
  • 12
    • 19244363430 scopus 로고    scopus 로고
    • A central pseudoknotted three-way junction imposes tRNA-like mimicry and the orientation of three 5′ upstream pseudoknots in the 3′ terminus of tobacco mosaic virus RNA
    • Felden, B., Florentz, C., Giegé, R. & Westhof, E. (1996). A central pseudoknotted three-way junction imposes tRNA-like mimicry and the orientation of three 5′ upstream pseudoknots in the 3′ terminus of tobacco mosaic virus RNA. RNA 2, 201-212.
    • (1996) RNA , vol.2 , pp. 201-212
    • Felden, B.1    Florentz, C.2    Giegé, R.3    Westhof, E.4
  • 13
    • 0033858148 scopus 로고    scopus 로고
    • The infectivities of turnip yellow mosaic virus genomes with altered tRNA mimicry are not dependent on compensating mutations in the viral replication protein
    • Filichkin, S. A., Bransom, K. L., Goodwin, J. B. & Dreher, T. W. (2000). The infectivities of turnip yellow mosaic virus genomes with altered tRNA mimicry are not dependent on compensating mutations in the viral replication protein. J Virol 74, 8368-8375.
    • (2000) J. Virol. , vol.74 , pp. 8368-8375
    • Filichkin, S.A.1    Bransom, K.L.2    Goodwin, J.B.3    Dreher, T.W.4
  • 14
    • 0031592572 scopus 로고    scopus 로고
    • Characterization of chimeric turnip yellow mosaic virus genomes that are infectious in the absence of aminoacylation
    • Goodwin, J. B., Skuzeski, J. M. & Dreher, T. W. (1997). Characterization of chimeric turnip yellow mosaic virus genomes that are infectious in the absence of aminoacylation. Virology 230, 113-124.
    • (1997) Virology , vol.230 , pp. 113-124
    • Goodwin, J.B.1    Skuzeski, J.M.2    Dreher, T.W.3
  • 15
    • 0027935972 scopus 로고
    • Similarities between the secondary structure of satellite tobacco mosaic virus and tobamovirus RNAs
    • Gultyaev, A. P., van Batenburg, E. & Pleij, C. W. A. (1994). Similarities between the secondary structure of satellite tobacco mosaic virus and tobamovirus RNAs. J Gen Virol 75, 2851-2856.
    • (1994) J. Gen. Virol. , vol.75 , pp. 2851-2856
    • Gultyaev, A.P.1    van Batenburg, E.2    Pleij, C.W.A.3
  • 16
    • 0029061125 scopus 로고
    • The computer simulation of RNA folding pathways using a genetic algorithm
    • Gultyaev, A. P., van Batenburg, F. H. D. & Pleij, C. W. A. (1995). The computer simulation of RNA folding pathways using a genetic algorithm. J Mol Biol 250, 37-51.
    • (1995) J. Mol. Biol. , vol.250 , pp. 37-51
    • Gultyaev, A.P.1    van Batenburg, F.H.D.2    Pleij, C.W.A.3
  • 17
    • 0030273446 scopus 로고    scopus 로고
    • Secondary structure model of the coat protein gene of turnip yellow mosaic virus RNA: Long, C-rich, single-stranded regions
    • Hellendoorn, K., Mat, A. W., Gultyaev, A. P. & Pleij, C. W. A. (1996a). Secondary structure model of the coat protein gene of turnip yellow mosaic virus RNA: long, C-rich, single-stranded regions. Virology 224, 43-54.
    • (1996) Virology , vol.224 , pp. 43-54
    • Hellendoorn, K.1    Mat, A.W.2    Gultyaev, A.P.3    Pleij, C.W.A.4
  • 18
    • 0030462822 scopus 로고    scopus 로고
    • Protonatable hairpins are conserved in the 5′-untranslated region of tymovirus RNAs
    • Hellendoorn, K., Michiels, P. J., Buitenhuis, R. & Pleij, C. W. A. (1996b). Protonatable hairpins are conserved in the 5′-untranslated region of tymovirus RNAs. Nucleic Acids Res 24, 4910-4917.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 4910-4917
    • Hellendoorn, K.1    Michiels, P.J.2    Buitenhuis, R.3    Pleij, C.W.A.4
  • 19
    • 0030748943 scopus 로고    scopus 로고
    • A functional role for the conserved protonatable hairpins in the 5′ untranslated region of turnip yellow mosaic virus RNA
    • Hellendoorn, K., Verlaan, P. W. & Pleij, C. W. A. (1997). A functional role for the conserved protonatable hairpins in the 5′ untranslated region of turnip yellow mosaic virus RNA. J Virol 71, 8774-8779.
    • (1997) J. Virol. , vol.71 , pp. 8774-8779
    • Hellendoorn, K.1    Verlaan, P.W.2    Pleij, C.W.A.3
  • 20
    • 0028805921 scopus 로고
    • Expression of the turnip yellow mosaic virus proteinase in Escherichia coli and determination of the cleavage site within the 206 kDa protein
    • Kadare, G., Rozanov, M. & Haenni, A.-L. (1995). Expression of the turnip yellow mosaic virus proteinase in Escherichia coli and determination of the cleavage site within the 206 kDa protein. J Gen Virol 76, 2853-2857.
    • (1995) J. Gen. Virol. , vol.76 , pp. 2853-2857
    • Kadare, G.1    Rozanov, M.2    Haenni, A.-L.3
  • 21
    • 0028888371 scopus 로고
    • Sequence analysis and gene content of potato mop top virus RNA 3: Further evidence of heterogeneity in the genome organization of furoviruses
    • Kashiwazaki, S., Scott, K. P., Reavy, B. & Harrison, B. D. (1995). Sequence analysis and gene content of potato mop top virus RNA 3: further evidence of heterogeneity in the genome organization of furoviruses. Virology 206, 701-706.
    • (1995) Virology , vol.206 , pp. 701-706
    • Kashiwazaki, S.1    Scott, K.P.2    Reavy, B.3    Harrison, B.D.4
  • 22
    • 11144221247 scopus 로고    scopus 로고
    • Ein Tymovirus aus den Zierpflanzen Diascia und Nemesia - Wie zuverlässig ist die Serologie bei der Identifizierung von Pflanzenviren?
    • Koenig, R. & Lesemann, D.-E. (2000). Ein Tymovirus aus den Zierpflanzen Diascia und Nemesia - wie zuverlässig ist die Serologie bei der Identifizierung von Pflanzenviren? Phytomedizin 30, 16-17.
    • (2000) Phytomedizin , vol.30 , pp. 16-17
    • Koenig, R.1    Lesemann, D.-E.2
  • 23
    • 0031845286 scopus 로고    scopus 로고
    • Genome properties of beet virus Q, a new furo-like virus from sugarbeet, determined from unpurified virus
    • Koenig, R., Pleij, C. W. A., Beier, C. & Commandeur, U. (1998). Genome properties of beet virus Q, a new furo-like virus from sugarbeet, determined from unpurified virus. J Gen Virol 79, 2027-2036.
    • (1998) J. Gen. Virol. , vol.79 , pp. 2027-2036
    • Koenig, R.1    Pleij, C.W.A.2    Beier, C.3    Commandeur, U.4
  • 24
    • 0032702647 scopus 로고    scopus 로고
    • Molecular characterization of a new furovirus mainly infecting rye
    • Koenig, R., Pleij, C. W. A. & Huth, W. (1999). Molecular characterization of a new furovirus mainly infecting rye. Arch Virol 144, 2125-2140.
    • (1999) Arch. Virol. , vol.144 , pp. 2125-2140
    • Koenig, R.1    Pleij, C.W.A.2    Huth, W.3
  • 25
    • 0033949823 scopus 로고    scopus 로고
    • Structure and variability of the 3′ end of RNA 3 of beet soil-borne pomovirus - A virus with uncertain pathogenic effects
    • Koenig, R., Pleij, C. W. A. & Büttner, G. (2000). Structure and variability of the 3′ end of RNA 3 of beet soil-borne pomovirus - a virus with uncertain pathogenic effects. Arch Virol 145, 1173-1181.
    • (2000) Arch. Virol. , vol.145 , pp. 1173-1181
    • Koenig, R.1    Pleij, C.W.A.2    Büttner, G.3
  • 26
    • 2442543219 scopus 로고    scopus 로고
    • Molecular characterisation of potexviruses isolated from three different genera in the family Cactaceae
    • Koenig, R., Pleij, C. W. A., Loss, S., Burgermeister, W., Aust, H. & Schiemann, J. (2004). Molecular characterisation of potexviruses isolated from three different genera in the family Cactaceae. Arch Virol 149, 903-914.
    • (2004) Arch. Virol. , vol.149 , pp. 903-914
    • Koenig, R.1    Pleij, C.W.A.2    Loss, S.3    Burgermeister, W.4    Aust, H.5    Schiemann, J.6
  • 27
    • 20044369925 scopus 로고    scopus 로고
    • Molecular characterization of Anagyris vein yellowing virus, Plantago mottle virus and Scrophularia mottle virus - Comparison of various approaches for tymovirus classification
    • (in press)
    • Koenig, R., Pleij, C. W. A., Lesemann, D.-E., Loss, S. & Vetten, H. J. (2005). Molecular characterization of Anagyris vein yellowing virus, Plantago mottle virus and Scrophularia mottle virus - comparison of various approaches for tymovirus classification. Arch Virol (in press).
    • (2005) Arch. Virol.
    • Koenig, R.1    Pleij, C.W.A.2    Lesemann, D.-E.3    Loss, S.4    Vetten, H.J.5
  • 28
    • 0027504136 scopus 로고
    • Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences
    • Koonin, E. V. & Dolja, V. V. (1993). Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol Biol 28, 375-430.
    • (1993) Crit. Rev. Biochem. Mol. Biol. , vol.28 , pp. 375-430
    • Koonin, E.V.1    Dolja, V.V.2
  • 29
    • 0025998347 scopus 로고
    • tRNA-like structures. Structure, function and evolutionary significance
    • Mans, R. M., Pleij, C. W. A. & Bosch, L. (1991). tRNA-like structures. Structure, function and evolutionary significance. Eur J Biochem 201, 303-324.
    • (1991) Eur. J. Biochem. , vol.201 , pp. 303-324
    • Mans, R.M.1    Pleij, C.W.A.2    Bosch, L.3
  • 30
    • 0019741097 scopus 로고
    • Nucleotide sequence of a cloned cDNA copy of TMV (cowpea strain) RNA, including the assembly origin, the coat protein cistron, and the 3′ non-coding region
    • Meshi, T., Ohno, T., Iba, H. & Okada, Y. (1981). Nucleotide sequence of a cloned cDNA copy of TMV (cowpea strain) RNA, including the assembly origin, the coat protein cistron, and the 3′ non-coding region. Mol Gen Genet 184, 20-25.
    • (1981) Mol. Gen. Genet. , vol.184 , pp. 20-25
    • Meshi, T.1    Ohno, T.2    Iba, H.3    Okada, Y.4
  • 33
    • 0020490476 scopus 로고
    • The tRNA-like structure at the 3′ terminus of turnip yellow mosaic virus RNA. Differences and similarities with canonical tRNA
    • Rietveld, K., van Poelgeest, R., Pleij, C. W. A., van Boom, J. H. & Bosch, L. (1982). The tRNA-like structure at the 3′ terminus of turnip yellow mosaic virus RNA. Differences and similarities with canonical tRNA. Nucleic Acids Res 10, 1929-1946.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 1929-1946
    • Rietveld, K.1    van Poelgeest, R.2    Pleij, C.W.A.3    van Boom, J.H.4    Bosch, L.5
  • 34
    • 0000847459 scopus 로고
    • The three-dimensional folding of the tRNA-like structure of tobacco mosaic virus RNA. A new building principle applied twice
    • Rietveld, K., Linschooten, K., Pleij, C. W. A. & Bosch, L. (1984). The three-dimensional folding of the tRNA-like structure of tobacco mosaic virus RNA. A new building principle applied twice. EMBO J 3, 2613-2619.
    • (1984) EMBO J. , vol.3 , pp. 2613-2619
    • Rietveld, K.1    Linschooten, K.2    Pleij, C.W.A.3    Bosch, L.4
  • 35
    • 0028569503 scopus 로고
    • Histidylation by yeast HisRS of tRNA or tRNA-like structure relies on residues - 1 and 73 but is dependent on the RNA context
    • Rudinger, J., Florentz, C. & Giegé, R. (1994). Histidylation by yeast HisRS of tRNA or tRNA-like structure relies on residues - 1 and 73 but is dependent on the RNA context. Nucleic Acids Res 22, 5031-5037.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 5031-5037
    • Rudinger, J.1    Florentz, C.2    Giegé, R.3
  • 37
    • 20044390376 scopus 로고    scopus 로고
    • Schäden an Zierpflanzen durch INSV und Nemesiavirus
    • Seigner, L. (2003). Schäden an Zierpflanzen durch INSV und Nemesiavirus. Das Magazin für Zierpflanzenbau 19, 47-49.
    • (2003) Das Magazin Für Zierpflanzenbau , vol.19 , pp. 47-49
    • Seigner, L.1
  • 38
    • 0031715151 scopus 로고    scopus 로고
    • Nucleotide sequence analysis of the 3′ terminal region of a wasabi strain of crucifer tobamovirus genomic RNA: Subgrouping of crucifer tobamoviruses
    • Shimamoto, I., Sonoda, S., Vazquez, P., Minaka, N. & Nishiguchi, M. (1998). Nucleotide sequence analysis of the 3′ terminal region of a wasabi strain of crucifer tobamovirus genomic RNA: subgrouping of crucifer tobamoviruses. Arch Virol 143, 1801-1813.
    • (1998) Arch. Virol. , vol.143 , pp. 1801-1813
    • Shimamoto, I.1    Sonoda, S.2    Vazquez, P.3    Minaka, N.4    Nishiguchi, M.5
  • 39
    • 0027170919 scopus 로고
    • Complete nucleotide sequence and organization of the bipartite RNA genome of soil-borne wheat mosaic virus
    • Shirako, Y. & Wilson, T. M. A. (1993). Complete nucleotide sequence and organization of the bipartite RNA genome of soil-borne wheat mosaic virus. Virology 195, 16-32.
    • (1993) Virology , vol.195 , pp. 16-32
    • Shirako, Y.1    Wilson, T.M.A.2
  • 41
    • 0029960781 scopus 로고    scopus 로고
    • The turnip yellow mosaic virus tRNA-like structure cannot be replaced by generic tRNA-like elements or by heterologous 3′ untranslated regions known to enhance mRNA expression and stability
    • Skuzeski, J. M., Bozarth, C. S. & Dreher, T. W. (1996). The turnip yellow mosaic virus tRNA-like structure cannot be replaced by generic tRNA-like elements or by heterologous 3′ untranslated regions known to enhance mRNA expression and stability. J Virol 70, 2107-2115.
    • (1996) J. Virol. , vol.70 , pp. 2107-2115
    • Skuzeski, J.M.1    Bozarth, C.S.2    Dreher, T.W.3
  • 42
    • 0022423674 scopus 로고
    • Five pseudoknots are present at the 204 nucleotides long 3′ noncoding region of tobacco mosaic virus RNA
    • van Belkum, A., Abrahams, J. P., Pleij, C. W. A. & Bosch, L. (1985). Five pseudoknots are present at the 204 nucleotides long 3′ noncoding region of tobacco mosaic virus RNA. Nucleic Acids Res 13, 7673-7686.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 7673-7686
    • van Belkum, A.1    Abrahams, J.P.2    Pleij, C.W.A.3    Bosch, L.4


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