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Volumn 12, Issue 7, 2006, Pages 1338-1349

Close spacing of AUG initiation codons confers dicistronic character on a eukaryotic mRNA

Author keywords

Leaky scanning; Luciferase reporter; Ribosome scanning, mechanism; Translation initiation, initiation coupling; Turnip yellow mosaic virus

Indexed keywords

LUCIFERASE; MESSENGER RNA; NUCLEOTIDE; VIRUS RNA;

EID: 33745614073     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.67906     Document Type: Article
Times cited : (53)

References (34)
  • 2
    • 0037428153 scopus 로고    scopus 로고
    • Entrapping ribosomes for viral translation: TRNA mimicry as a molecular Trojan horse
    • Barends, S., Bink, H.H., van den Worm, S.H., Pleij, C.W., and Kraal, B. 2003. Entrapping ribosomes for viral translation: tRNA mimicry as a molecular Trojan horse. Cell 112: 123-129.
    • (2003) Cell , vol.112 , pp. 123-129
    • Barends, S.1    Bink, H.H.2    Van Den Worm, S.H.3    Pleij, C.W.4    Kraal, B.5
  • 4
    • 20744431725 scopus 로고    scopus 로고
    • Control of translation by the 5′- and 3′-terminal regions of the dengue virus genome
    • Chiu, W.W., Kinney, R.M., and Dreher, T.W. 2005. Control of translation by the 5′- and 3′-terminal regions of the dengue virus genome. J. Virol. 79: 8303-8315.
    • (2005) J. Virol. , vol.79 , pp. 8303-8315
    • Chiu, W.W.1    Kinney, R.M.2    Dreher, T.W.3
  • 5
    • 26944478233 scopus 로고    scopus 로고
    • Evolutionary conservation suggests a regulatory function of AUG triplets in 5′-UTRs of eukaryotic genes
    • Churbanov, A., Rogozin, I.B., Babenko, V.N., Ali, H., and Koonin, E.V. 2005. Evolutionary conservation suggests a regulatory function of AUG triplets in 5′-UTRs of eukaryotic genes. Nucleic Acids Res. 33: 5512-5520.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 5512-5520
    • Churbanov, A.1    Rogozin, I.B.2    Babenko, V.N.3    Ali, H.4    Koonin, E.V.5
  • 6
    • 4544226034 scopus 로고    scopus 로고
    • Pathogen profile. Turnip yellow mosaic virus: Transfer RNA mimicry, chloroplasts and a C-rich genome
    • Dreher, T.W. 2004. Pathogen profile. Turnip yellow mosaic virus: Transfer RNA mimicry, chloroplasts and a C-rich genome. Mol. Plant Pathol. 5: 367-375.
    • (2004) Mol. Plant Pathol. , vol.5 , pp. 367-375
    • Dreher, T.W.1
  • 7
    • 0025129247 scopus 로고
    • Translation of bicistronic viral mRNA in transfected cells: Regulation at the level of elongation
    • Fajardo, J.E. and Shatkin, A.J. 1990. Translation of bicistronic viral mRNA in transfected cells: Regulation at the level of elongation. Proc. Natl. Acad. Sci. 87: 328-332.
    • (1990) Proc. Natl. Acad. Sci. , vol.87 , pp. 328-332
    • Fajardo, J.E.1    Shatkin, A.J.2
  • 8
    • 27144510561 scopus 로고    scopus 로고
    • Translational regulation of GCN4 and the general amino acid control of yeast
    • Hinnebusch, A.G. 2005. Translational regulation of GCN4 and the general amino acid control of yeast. Annu. Rev. Microbiol. 59: 407-450.
    • (2005) Annu. Rev. Microbiol. , vol.59 , pp. 407-450
    • Hinnebusch, A.G.1
  • 9
    • 17044409660 scopus 로고    scopus 로고
    • uAUG and uORFs in human and rodent 5′ untranslated mRNAs
    • Iacono, M., Mignone, F., and Pesole, G. 2005. uAUG and uORFs in human and rodent 5′ untranslated mRNAs. Gene 349: 97-105.
    • (2005) Gene , vol.349 , pp. 97-105
    • Iacono, M.1    Mignone, F.2    Pesole, G.3
  • 10
    • 28844476749 scopus 로고    scopus 로고
    • Alternative mechanisms of initiating translation of mammalian mRNAs
    • Jackson, R.J. 2005. Alternative mechanisms of initiating translation of mammalian mRNAs. Biochem. Soc. Trans. 33: 1231-1241.
    • (2005) Biochem. Soc. Trans. , vol.33 , pp. 1231-1241
    • Jackson, R.J.1
  • 11
    • 33646791554 scopus 로고    scopus 로고
    • Divergent IRES elements in invertebrates
    • Epub, doi:10.1016/j.virusres. 2005.10.011
    • Jan, E. 2005a. Divergent IRES elements in invertebrates. Virus Res. [Epub, doi:10.1016/j.virusres. 2005.10.011].
    • (2005) Virus Res.
    • Jan, E.1
  • 12
    • 0031460023 scopus 로고    scopus 로고
    • Context sequences of translation initiation codon in plants
    • Joshi, C.P., Zhou, H., Huang, X., and Chiang, V.L. 1997. Context sequences of translation initiation codon in plants. Plant Mol. Biol. 35: 993-1001.
    • (1997) Plant Mol. Biol. , vol.35 , pp. 993-1001
    • Joshi, C.P.1    Zhou, H.2    Huang, X.3    Chiang, V.L.4
  • 13
    • 3943080710 scopus 로고    scopus 로고
    • The molecular mechanics of eukaryotic translation
    • Kapp, L.D. and Lorsch, J.R. 2004. The molecular mechanics of eukaryotic translation. Annu. Rev. Biochem. 73: 657-704.
    • (2004) Annu. Rev. Biochem. , vol.73 , pp. 657-704
    • Kapp, L.D.1    Lorsch, J.R.2
  • 14
    • 13944270653 scopus 로고    scopus 로고
    • mRNA sequence features that contribute to translational regulation in Arabidopsis
    • Kawaguchi, R. and Bailey-Serres, J. 2005. mRNA sequence features that contribute to translational regulation in Arabidopsis. Nucleic Acids Res. 33: 955-965.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 955-965
    • Kawaguchi, R.1    Bailey-Serres, J.2
  • 15
    • 0024414469 scopus 로고
    • Circumstances and mechanisms of inhibition of translation by secondary structure in eucaryotic mRNAs
    • Kozak, M. 1989. Circumstances and mechanisms of inhibition of translation by secondary structure in eucaryotic mRNAs. Mol. Cell. Biol. 9: 5134-5142.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 5134-5142
    • Kozak, M.1
  • 16
    • 0026151096 scopus 로고
    • Effects of long 5′ leader sequences on initiation by eukaryotic ribosomes in vitro
    • _. 1991. Effects of long 5′ leader sequences on initiation by eukaryotic ribosomes in vitro. Gene Expr. 1: 117-125.
    • (1991) Gene Expr. , vol.1 , pp. 117-125
  • 17
    • 0028914004 scopus 로고
    • Adherence to the first-AUG rule when a second AUG codon follows closely upon the first
    • _. 1995. Adherence to the first-AUG rule when a second AUG codon follows closely upon the first. Proc. Natl. Acad. Sci. 92: 2662-2666.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 2662-2666
  • 18
    • 0033061571 scopus 로고    scopus 로고
    • Initiation of translation in prokaryotes and eukaryotes
    • _. 1999. Initiation of translation in prokaryotes and eukaryotes. Gene 234: 187-208.
    • (1999) Gene , vol.234 , pp. 187-208
  • 19
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • _. 2002. Pushing the limits of the scanning mechanism for initiation of translation. Gene 299: 1-34.
    • (2002) Gene , vol.299 , pp. 1-34
  • 20
    • 0034657332 scopus 로고    scopus 로고
    • In vivo evaluation of the context sequence of the translation initiation codon in plants
    • Lukaszewicz, M., Feuermann, M., Jerouville, B., Stas, A., and Boutry, M. 2000. In vivo evaluation of the context sequence of the translation initiation codon in plants. Plant Sci. 154: 89-98.
    • (2000) Plant Sci. , vol.154 , pp. 89-98
    • Lukaszewicz, M.1    Feuermann, M.2    Jerouville, B.3    Stas, A.4    Boutry, M.5
  • 21
    • 4143129900 scopus 로고    scopus 로고
    • Expression of the two nested overlapping reading frames of turnip yellow mosaic virus RNA is enhanced by a 5′ cap and by 5′ and 3′ viral sequences
    • Matsuda, D., Bauer, L., Tinnesand, K., and Dreher, T.W. 2004. Expression of the two nested overlapping reading frames of turnip yellow mosaic virus RNA is enhanced by a 5′ cap and by 5′ and 3′ viral sequences. J. Virol. 78: 9325-9335.
    • (2004) J. Virol. , vol.78 , pp. 9325-9335
    • Matsuda, D.1    Bauer, L.2    Tinnesand, K.3    Dreher, T.W.4
  • 22
    • 0000965677 scopus 로고
    • The synthesis of high-molecular-weight proteins in the wheat germ translation system
    • Morch, M.D., Drugeon, G., Zagorski, W., and Haenni, A.L. 1986. The synthesis of high-molecular-weight proteins in the wheat germ translation system. Methods Enzymol. 118: 154-164.
    • (1986) Methods Enzymol. , vol.118 , pp. 154-164
    • Morch, M.D.1    Drugeon, G.2    Zagorski, W.3    Haenni, A.L.4
  • 23
    • 0032876556 scopus 로고    scopus 로고
    • Identification and characterization of the functional elements within the tobacco etch virus 5′ leader required for cap-independent translation
    • Niepel, M. and Gallie, D.R. 1999. Identification and characterization of the functional elements within the tobacco etch virus 5′ leader required for cap-independent translation. J. Virol. 73: 9080-9088.
    • (1999) J. Virol. , vol.73 , pp. 9080-9088
    • Niepel, M.1    Gallie, D.R.2
  • 24
    • 7444253965 scopus 로고    scopus 로고
    • Analysis of small human proteins reveals the translation of upstream open reading frames of mRNAs
    • Oyama, M., Itagaki, C., Hata, H., Suzuki, Y., Izumi, T., Natsume, T., Isobe, T., and Sugano, S. 2004. Analysis of small human proteins reveals the translation of upstream open reading frames of mRNAs. Genome Res. 14: 2048-2052.
    • (2004) Genome Res. , vol.14 , pp. 2048-2052
    • Oyama, M.1    Itagaki, C.2    Hata, H.3    Suzuki, Y.4    Izumi, T.5    Natsume, T.6    Isobe, T.7    Sugano, S.8
  • 25
    • 0037439060 scopus 로고    scopus 로고
    • Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosome entry site without initiation factors or initiator tRNA
    • Pestova, T.P. and Hellen, C.U.T. 2003. Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosome entry site without initiation factors or initiator tRNA. Genes & Dev. 17: 181-186.
    • (2003) Genes & Dev. , vol.17 , pp. 181-186
    • Pestova, T.P.1    Hellen, C.U.T.2
  • 27
    • 29444448041 scopus 로고    scopus 로고
    • Idiosynchratic behaviour of tRNA-like structures in translation of plant viral RNA genomes
    • Rudinger-Thirion, J., Olsthoorn, R.C.L., Giegé, R., and Barends, S. 2005. Idiosynchratic behaviour of tRNA-like structures in translation of plant viral RNA genomes. J. Mol. Biol. 355: 873-878.
    • (2005) J. Mol. Biol. , vol.355 , pp. 873-878
    • Rudinger-Thirion, J.1    Olsthoorn, R.C.L.2    Giegé, R.3    Barends, S.4
  • 28
    • 0034175559 scopus 로고    scopus 로고
    • Ribosome shunting in the cauliflower mosaic virus 35S RNA leader is a special case of reinitiation of translation functioning in plant and animal systems
    • Ryabova, L.A. and Hohn, T. 2000. Ribosome shunting in the cauliflower mosaic virus 35S RNA leader is a special case of reinitiation of translation functioning in plant and animal systems. Genes & Dev. 14: 817-829.
    • (2000) Genes & Dev. , vol.14 , pp. 817-829
    • Ryabova, L.A.1    Hohn, T.2
  • 29
    • 0030731419 scopus 로고    scopus 로고
    • Starting at the beginning, middle, and end: Translation initiation in eukaryotes
    • Sachs, A.B., Sarnow, P., and Hentze, M.W. 1997. Starting at the beginning, middle, and end: Translation initiation in eukaryotes. Cell 89: 831-838.
    • (1997) Cell , vol.89 , pp. 831-838
    • Sachs, A.B.1    Sarnow, P.2    Hentze, M.W.3
  • 30
    • 0036354818 scopus 로고    scopus 로고
    • Toeprint analysis of the positioning of translation apparatus components at initiation and termination codons of fungal mRNAs
    • Sachs, M.S., Wang, Z., Gaba, A., Fang, P., Belk, J., Ganesan, R., Amrani, N., and Jacobson, A. 2002. Toeprint analysis of the positioning of translation apparatus components at initiation and termination codons of fungal mRNAs. Methods 26: 105-114.
    • (2002) Methods , vol.26 , pp. 105-114
    • Sachs, M.S.1    Wang, Z.2    Gaba, A.3    Fang, P.4    Belk, J.5    Ganesan, R.6    Amrani, N.7    Jacobson, A.8
  • 32
    • 0024979026 scopus 로고
    • Infectious TYMV RNA from cloned cDNA: Effects in vitro and in vivo of point substitutions in the initiation codons of two extensively overlapping ORFs
    • Weiland, J.J. and Dreher, T.W. 1989. Infectious TYMV RNA from cloned cDNA: Effects in vitro and in vivo of point substitutions in the initiation codons of two extensively overlapping ORFs. Nucleic Acids Res. 17: 4675-4687.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 4675-4687
    • Weiland, J.J.1    Dreher, T.W.2
  • 33
    • 0024476695 scopus 로고
    • Effect of mutations and deletions in a bicistronic mRNA on the synthesis of influenza B virus NB and NA glycoproteins
    • Williams, M.A. and Lamb, R.A. 1989. Effect of mutations and deletions in a bicistronic mRNA on the synthesis of influenza B virus NB and NA glycoproteins. J. Virol. 63: 28-35.
    • (1989) J. Virol. , vol.63 , pp. 28-35
    • Williams, M.A.1    Lamb, R.A.2
  • 34
    • 0345860903 scopus 로고    scopus 로고
    • Small open reading frames in 5′ untranslated regions of mRNAs
    • Yamashita, R., Suzuki, Y., Nakai, K., and Sugano, S. 2003. Small open reading frames in 5′ untranslated regions of mRNAs. C.R. Biol. 326: 987-991.
    • (2003) C.R. Biol. , vol.326 , pp. 987-991
    • Yamashita, R.1    Suzuki, Y.2    Nakai, K.3    Sugano, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.