-
1
-
-
33744981623
-
Image processing with ImageJ
-
Abramoff, M.D., Magelhaes, P.J., and Ram, S.J. (2004) Image processing with ImageJ. Biophot Int 11: 36-42.
-
(2004)
Biophot Int
, vol.11
, pp. 36-42
-
-
Abramoff, M.D.1
Magelhaes, P.J.2
Ram, S.J.3
-
2
-
-
10544243793
-
Cloning, sequencing, characterisation and implications for vaccine design of the novel dihydrolipoyl acetyltransferase of Neisseria meningitidis
-
Ala' Aldeen, D.A., Westphal, A.H., De Kok, A., Weston, V., Atta, M.S., Baldwin, T.J., et al. (1996) Cloning, sequencing, characterisation and implications for vaccine design of the novel dihydrolipoyl acetyltransferase of Neisseria meningitidis. J Med Microbiol 45: 419-432.
-
(1996)
J Med Microbiol
, vol.45
, pp. 419-432
-
-
Ala'Aldeen, D.A.1
Westphal, A.H.2
De Kok, A.3
Weston, V.4
Atta, M.S.5
Baldwin, T.J.6
-
3
-
-
0001903885
-
The haemophilus group
-
Man. Dubos, R.J., and Hirsch, J.G. (eds). London: Pitman Medical Publishing
-
Alexander, H.E. (1965) The haemophilus group. In Bacterial and Mycotic Infection in Man. Dubos, R.J., and Hirsch, J.G. (eds). London: Pitman Medical Publishing, pp. 724-741.
-
(1965)
Bacterial and Mycotic Infection
, pp. 724-741
-
-
Alexander, H.E.1
-
4
-
-
0022645071
-
Superoxide dismutase and oxygen toxicity defenses in the genus Neisseria
-
Archibald, F.S., and Duong, M.N. (1986) Superoxide dismutase and oxygen toxicity defenses in the genus Neisseria. Infect Immun 51: 631-641.
-
(1986)
Infect Immun
, vol.51
, pp. 631-641
-
-
Archibald, F.S.1
Duong, M.N.2
-
5
-
-
0033025238
-
The thioredoxin superfamily: Redundancy, specificity, and gray-area genomics
-
Aslund, F., and Beckwith, J. (1999) The thioredoxin superfamily: redundancy, specificity, and gray-area genomics. J Bacteriol 181: 1375-1379.
-
(1999)
J Bacteriol
, vol.181
, pp. 1375-1379
-
-
Aslund, F.1
Beckwith, J.2
-
6
-
-
0011542799
-
The Pfam protein families database
-
Bateman, A., Birney, E., Cerruti, L., Durbin, R., Etwiller, L., Eddy, S.R., et al. (2002) The Pfam protein families database. Nucleic Acids Res 30: 276-280.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 276-280
-
-
Bateman, A.1
Birney, E.2
Cerruti, L.3
Durbin, R.4
Etwiller, L.5
Eddy, S.R.6
-
7
-
-
0033957334
-
Increased expression of periplasmic Cu,Zn superoxide dismutase enhances survival of Escherichia coli invasive strains within nonphagocytic cells
-
Battistoni, A., Pacello, F., Folcarelli, S., Ajello, M., Donnarumma, G., Greco, R., et al. (2000) Increased expression of periplasmic Cu,Zn superoxide dismutase enhances survival of Escherichia coli invasive strains within nonphagocytic cells. Infect Immun 68: 30-37.
-
(2000)
Infect Immun
, vol.68
, pp. 30-37
-
-
Battistoni, A.1
Pacello, F.2
Folcarelli, S.3
Ajello, M.4
Donnarumma, G.5
Greco, R.6
-
8
-
-
0028812869
-
Role of rpoS in the regulation of glutathione oxidoreductase (gor) in Escherichia coli
-
Becker-Hapak, M., and Eisenstark, A. (1995) Role of rpoS in the regulation of glutathione oxidoreductase (gor) in Escherichia coli. FEMS Microbiol Lett 134: 39-44.
-
(1995)
FEMS Microbiol Lett
, vol.134
, pp. 39-44
-
-
Becker-Hapak, M.1
Eisenstark, A.2
-
9
-
-
0031850630
-
Bacillus subtilis contains multiple fur homologues: Identification of the iron uptake (Fur) and peroxide regulon (PerR) repressors
-
Bsat, N., Herbig, A., Casillas-Martinez, L., Setlow, P., and Helmann, J.D. (1998) Bacillus subtilis contains multiple Fur homologues: identification of the iron uptake (Fur) and peroxide regulon (PerR) repressors. Mol Microbiol 29: 189-198.
-
(1998)
Mol Microbiol
, vol.29
, pp. 189-198
-
-
Bsat, N.1
Herbig, A.2
Casillas-Martinez, L.3
Setlow, P.4
Helmann, J.D.5
-
10
-
-
0035043710
-
The neutrophil: Function and regulation in innate and humoral immunity
-
Burg, N.D., and Pillinger, M.H. (2001) The neutrophil: function and regulation in innate and humoral immunity. Clin Immunol 99: 7-17.
-
(2001)
Clin Immunol
, vol.99
, pp. 7-17
-
-
Burg, N.D.1
Pillinger, M.H.2
-
11
-
-
0033767925
-
Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress
-
Carmel-Harel, O., and Storz, G. (2000) Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress. Annu Rev Microbiol 54: 439-461.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 439-461
-
-
Carmel-Harel, O.1
Storz, G.2
-
12
-
-
1642483650
-
Vibrio cholerae thiol peroxidase-glutaredoxin fusion is a 2-Cys TSA/AhpC subfamily acting as a lipid hydroperoxide reductase
-
Cha, M.K., Hong, S.K., Lee, D.S., and Kim, I.H. (2004) Vibrio cholerae thiol peroxidase-glutaredoxin fusion is a 2-Cys TSA/AhpC subfamily acting as a lipid hydroperoxide reductase. J Biol Chem 279: 11035-11041.
-
(2004)
J Biol Chem
, vol.279
, pp. 11035-11041
-
-
Cha, M.K.1
Hong, S.K.2
Lee, D.S.3
Kim, I.H.4
-
13
-
-
0032849337
-
Neisseria gonorrhoeae bacterioferritin: Structural heterogeneity, involvement in iron storage and protection against oxidative stress
-
Chen, C.Y., and Morse, S.A. (1999) Neisseria gonorrhoeae bacterioferritin: structural heterogeneity, involvement in iron storage and protection against oxidative stress. Microbiology 145: 2967-2975.
-
(1999)
Microbiology
, vol.145
, pp. 2967-2975
-
-
Chen, C.Y.1
Morse, S.A.2
-
14
-
-
0021930684
-
Positive control of a regulon for defenses against oxidative stress and some heat-shock proteins in Salmonella typhimurium
-
Christman, M.F., Morgan, R.W., Jacobson, F.S., and Ames, B.N. (1985) Positive control of a regulon for defenses against oxidative stress and some heat-shock proteins in Salmonella typhimurium. Cell 41: 753-762.
-
(1985)
Cell
, vol.41
, pp. 753-762
-
-
Christman, M.F.1
Morgan, R.W.2
Jacobson, F.S.3
Ames, B.N.4
-
15
-
-
0342333739
-
OxyR, a positive regulator of hydrogen peroxide-inducible genes in Escherichia coli and Salmonella typhimurium, is homologous to a family of bacterial regulatory proteins
-
Christman, M.F., Storz, G., and Ames, B.N. (1989) OxyR, a positive regulator of hydrogen peroxide-inducible genes in Escherichia coli and Salmonella typhimurium, is homologous to a family of bacterial regulatory proteins. Proc Natl Acad Sci USA 86: 3484-3488.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 3484-3488
-
-
Christman, M.F.1
Storz, G.2
Ames, B.N.3
-
16
-
-
0033591467
-
Bacterial biofilms: A common cause of persistent infections
-
Costerton, J.W., Stewart, P.S., and Greenberg, E.P. (1999) Bacterial biofilms: a common cause of persistent infections. Science 284: 1318-1322.
-
(1999)
Science
, vol.284
, pp. 1318-1322
-
-
Costerton, J.W.1
Stewart, P.S.2
Greenberg, E.P.3
-
17
-
-
0033941953
-
The outer membrane protein, antigen 43, mediates cell-to-cell interactions within Escherichia coli biofilms
-
Danese, P.N., Pratt, L.A., Dove, S.L., and Kolter, R. (2000) The outer membrane protein, antigen 43, mediates cell-to-cell interactions within Escherichia coli biofilms. Mol Microbiol 37: 424-432.
-
(2000)
Mol Microbiol
, vol.37
, pp. 424-432
-
-
Danese, P.N.1
Pratt, L.A.2
Dove, S.L.3
Kolter, R.4
-
18
-
-
0033850043
-
Neisseria gonorrhoeae elicits membrane ruffling and cytoskeletal rearrangements upon infection of primary human endocervical and ectocervical cells
-
Edwards, J.L., Shao, J.Q., Ault, K.A., and Apicella, M.A. (2000) Neisseria gonorrhoeae elicits membrane ruffling and cytoskeletal rearrangements upon infection of primary human endocervical and ectocervical cells. Infect Immun 68: 5354-5363.
-
(2000)
Infect Immun
, vol.68
, pp. 5354-5363
-
-
Edwards, J.L.1
Shao, J.Q.2
Ault, K.A.3
Apicella, M.A.4
-
19
-
-
16244384159
-
Biofilm formation by Neisseria gonorrhoeae
-
Greiner, L.L., Edwards, J.L., Shao, J., Rabinak, C., Entz, D., and Apicella, M.A. (2005) Biofilm formation by Neisseria gonorrhoeae. Infect Immun 73: 1964-1970.
-
(2005)
Infect Immun
, vol.73
, pp. 1964-1970
-
-
Greiner, L.L.1
Edwards, J.L.2
Shao, J.3
Rabinak, C.4
Entz, D.5
Apicella, M.A.6
-
20
-
-
18544402593
-
Sexually dimorphic expression of protease nexin-1 and vanin-1 in the developing mouse gonad prior to overt differentiation suggests a role in mammalian sexual development
-
Grimmond, S., Van Hateren, N., Siggers, P., Arkell, R., Larder, R., Soares, M.B., et al. (2000) Sexually dimorphic expression of protease nexin-1 and vanin-1 in the developing mouse gonad prior to overt differentiation suggests a role in mammalian sexual development. Hum Mol Genet 9: 1553-1560.
-
(2000)
Hum Mol Genet
, vol.9
, pp. 1553-1560
-
-
Grimmond, S.1
Van Hateren, N.2
Siggers, P.3
Arkell, R.4
Larder, R.5
Soares, M.B.6
-
21
-
-
1842612577
-
Bacterial biofilms: From the natural environment to infectious diseases
-
Hall-Stoodley, L., Costerton, J.W., and Stoodley, P. (2004) Bacterial biofilms: from the natural environment to infectious diseases. Nat Rev Microbiol 2: 95-108.
-
(2004)
Nat Rev Microbiol
, vol.2
, pp. 95-108
-
-
Hall-Stoodley, L.1
Costerton, J.W.2
Stoodley, P.3
-
22
-
-
0032213375
-
Inside the neutrophil phagosome: Oxidants, myeloperoxidase, and bacterial killing
-
Hampton, M.B., Kettle, A.J., and Winterbourn, C.C. (1998) Inside the neutrophil phagosome: oxidants, myeloperoxidase, and bacterial killing. Blood 92: 3007-3017.
-
(1998)
Blood
, vol.92
, pp. 3007-3017
-
-
Hampton, M.B.1
Kettle, A.J.2
Winterbourn, C.C.3
-
23
-
-
0025572769
-
recA and catalase in H2O2-mediated toxicity in Neisseria gonorrhoeae
-
Hassett, D.J., Charniga, L., and Cohen, M.S. (1990) recA and catalase in H2O2-mediated toxicity in Neisseria gonorrhoeae. J Bacteriol 172: 7293-7296.
-
(1990)
J Bacteriol
, vol.172
, pp. 7293-7296
-
-
Hassett, D.J.1
Charniga, L.2
Cohen, M.S.3
-
24
-
-
0033764531
-
Quantification of biofilm structures by the novel computer program COMSTAT
-
Heydorn, A., Nielsen, A.T., Hentzer, M., Sternberg, C., Givskov, M., Ersboll, B.K., and Molin, S. (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology 146: 2395-2407.
-
(2000)
Microbiology
, vol.146
, pp. 2395-2407
-
-
Heydorn, A.1
Nielsen, A.T.2
Hentzer, M.3
Sternberg, C.4
Givskov, M.5
Ersboll, B.K.6
Molin, S.7
-
25
-
-
0036249816
-
Peroxiredoxins
-
Hofmann, B., Hecht, H.J., and Flohe, L. (2002) Peroxiredoxins. Biol Chem 383: 347-364.
-
(2002)
Biol Chem
, vol.383
, pp. 347-364
-
-
Hofmann, B.1
Hecht, H.J.2
Flohe, L.3
-
26
-
-
0001809806
-
Gonococcal infections in adults
-
Holmes, K.K., Sparling, P.F., Mardh, P.A., Lemon, S.M., Stamm, W.E., Piot, P., and Wasserheit, J.N. (eds). New York: New York McGraw-Hill
-
Hook, E.W., and Handsfield, H. (1999) Gonococcal infections in adults. In Sexually Transmitted Diseases. Holmes, K.K., Sparling, P.F., Mardh, P.A., Lemon, S.M., Stamm, W.E., Piot, P., and Wasserheit, J.N. (eds). New York: New York McGraw-Hill, pp. 451-466.
-
(1999)
Sexually Transmitted Diseases
, pp. 451-466
-
-
Hook, E.W.1
Handsfield, H.2
-
27
-
-
0035013928
-
PerR controls oxidative stress resistance and iron storage proteins and is required for virulence in Staphylococcus aureus
-
Horsburgh, M.J., Clements, M.O., Crossley, H., Ingham, E., and Foster, S.J. (2001) PerR controls oxidative stress resistance and iron storage proteins and is required for virulence in Staphylococcus aureus. Infect Immun 69: 3744-3754.
-
(2001)
Infect Immun
, vol.69
, pp. 3744-3754
-
-
Horsburgh, M.J.1
Clements, M.O.2
Crossley, H.3
Ingham, E.4
Foster, S.J.5
-
28
-
-
0242608621
-
Pathways of oxidative damage
-
Imlay, J.A. (2003) Pathways of oxidative damage. Annu Rev Microbiol 57: 395-418.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 395-418
-
-
Imlay, J.A.1
-
29
-
-
0031757669
-
Multiple sequence alignment with Clustal X
-
Jeanmougin, F., Thompson, J.D., Gouy, M., Higgins, D.G., and Gibson, T.J. (1998) Multiple sequence alignment with Clustal X. Trends Biochem Sci 23: 403-405.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 403-405
-
-
Jeanmougin, F.1
Thompson, J.D.2
Gouy, M.3
Higgins, D.G.4
Gibson, T.J.5
-
30
-
-
0029564106
-
Molecular analysis of a locus for the biosynthesis and phase-variable expression of the lacto-N-neotetraose terminal lipopolysaccharide structure in Neisseria meningitidis
-
Jennings, M.P., Hood, D.W., Peak, I.R., Virji, M., and Moxon, E.R. (1995) Molecular analysis of a locus for the biosynthesis and phase-variable expression of the lacto-N-neotetraose terminal lipopolysaccharide structure in Neisseria meningitidis. Mol Microbiol 18: 729-740.
-
(1995)
Mol Microbiol
, vol.18
, pp. 729-740
-
-
Jennings, M.P.1
Hood, D.W.2
Peak, I.R.3
Virji, M.4
Moxon, E.R.5
-
31
-
-
0027535314
-
Characterization of a catalase-deficient strain of Neisseria gonorrhoeae: Evidence for the significance of catalase in the biology of N. gonorrhoeae
-
Johnson, S.R., Steiner, B.M., Cruce, D.D., Perkins, G.H., and Arko, R.J. (1993) Characterization of a catalase-deficient strain of Neisseria gonorrhoeae: evidence for the significance of catalase in the biology of N. gonorrhoeae. Infect Immun 61: 1232-1238.
-
(1993)
Infect Immun
, vol.61
, pp. 1232-1238
-
-
Johnson, S.R.1
Steiner, B.M.2
Cruce, D.D.3
Perkins, G.H.4
Arko, R.J.5
-
32
-
-
0000736659
-
Neisseria gonorrhoeae. I. Virulence genetically linked to clonal variation
-
Kellogg, D.S., Jr, Peacock, W.L., Jr, Deacon, W.E., Brown, L., and Pirkle, D.I. (1963) Neisseria gonorrhoeae. I. Virulence genetically linked to clonal variation. J Bacteriol 85: 1274-1279.
-
(1963)
J Bacteriol
, vol.85
, pp. 1274-1279
-
-
Kellogg Jr., D.S.1
Peacock Jr., W.L.2
Deacon, W.E.3
Brown, L.4
Pirkle, D.I.5
-
33
-
-
0033802607
-
Identification of Brucella abortus OxyR and its role in control of catalase expression
-
Kim, J.A., and Mayfield, J. (2000) Identification of Brucella abortus OxyR and its role in control of catalase expression. J Bacteriol 182: 5631-5633.
-
(2000)
J Bacteriol
, vol.182
, pp. 5631-5633
-
-
Kim, J.A.1
Mayfield, J.2
-
34
-
-
0033888338
-
Antigen 43 from Escherichia coli induces inter- and intraspecies cell aggregation and changes in colony morphology of Pseudomonas fluorescens
-
Kjaergaard, K., Schembri, M.A., Hasman, H., and Klemm, P. (2000) Antigen 43 from Escherichia coli induces inter- and intraspecies cell aggregation and changes in colony morphology of Pseudomonas fluorescens. J Bacteriol 182: 4789-4796.
-
(2000)
J Bacteriol
, vol.182
, pp. 4789-4796
-
-
Kjaergaard, K.1
Schembri, M.A.2
Hasman, H.3
Klemm, P.4
-
35
-
-
0032537589
-
The pyruvate dehydrogenase multi-enzyme complex from Gram-negative bacteria
-
de Kok, A., Hengeveld, A.F., Martin, A., and Westphal, A.H. (1998) The pyruvate dehydrogenase multi-enzyme complex from Gram-negative bacteria. Biochim Biophys Acta 1385: 353-366.
-
(1998)
Biochim Biophys Acta
, vol.1385
, pp. 353-366
-
-
De Kok, A.1
Hengeveld, A.F.2
Martin, A.3
Westphal, A.H.4
-
36
-
-
0025183624
-
Variations in the activity of glutathione reductase and the cellular glutathione content in relation to sensitivity to methylviologen in Escherichia coli
-
Kunert, K.J., Cresswell, C.F., Schmidt, A., Mullineaux, P.M., and Foyer, C.H. (1990) Variations in the activity of glutathione reductase and the cellular glutathione content in relation to sensitivity to methylviologen in Escherichia coli. Arch Biochem Biophys 282: 233-238.
-
(1990)
Arch Biochem Biophys
, vol.282
, pp. 233-238
-
-
Kunert, K.J.1
Cresswell, C.F.2
Schmidt, A.3
Mullineaux, P.M.4
Foyer, C.H.5
-
37
-
-
0031037867
-
Analysis of the icsBA locus required for biosynthesis of the inner core region from Neisseria meningitidis lipopolysaccharide
-
van der Ley, P., Kramer, M., Martin, A., Richards, J.C., and Poolman, J.T. (1997) Analysis of the icsBA locus required for biosynthesis of the inner core region from Neisseria meningitidis lipopolysaccharide. FEMS Microbiol Lett 146: 247-253.
-
(1997)
FEMS Microbiol Lett
, vol.146
, pp. 247-253
-
-
Van Der Ley, P.1
Kramer, M.2
Martin, A.3
Richards, J.C.4
Poolman, J.T.5
-
38
-
-
0037151774
-
The Burkholderia pseudomallei oxyR gene: Expression analysis and mutant characterization
-
Loprasert, S., Sallabhan, R., Whangsuk, W., and Mongkolsuk, S. (2002) The Burkholderia pseudomallei oxyR gene: expression analysis and mutant characterization. Gene 296: 161-169.
-
(2002)
Gene
, vol.296
, pp. 161-169
-
-
Loprasert, S.1
Sallabhan, R.2
Whangsuk, W.3
Mongkolsuk, S.4
-
39
-
-
33745175039
-
-
LosAlamos [WWW document]. University of California for the US Department of Energy
-
LosAlamos (2005) Neisseria gonorrhoeae database [WWW document]. URL http://www.stdgen.lanl.gov/stdgen/bacteria/ngon/index.html. Los Alamos National Laboratory; University of California for the US Department of Energy.
-
(2005)
Neisseria Gonorrhoeae Database
-
-
-
40
-
-
0029907767
-
Lack of expression of the global regulator OxyR in Haemophilus influenzae has a profound effect on growth phenotype
-
Maciver, I., and Hansen, E.J. (1996) Lack of expression of the global regulator OxyR in Haemophilus influenzae has a profound effect on growth phenotype. Infect Immun 64: 4618-4629.
-
(1996)
Infect Immun
, vol.64
, pp. 4618-4629
-
-
Maciver, I.1
Hansen, E.J.2
-
41
-
-
0031859324
-
Construction and physiological analysis of a Xanthomonas mutant to examine the role of the oxyR gene in oxidant-induced protection against peroxide killing
-
Mongkolsuk, S., Sukchawalit, R., Loprasert, S., Praituan, W., and Upaichit, A. (1998) Construction and physiological analysis of a Xanthomonas mutant to examine the role of the oxyR gene in oxidant-induced protection against peroxide killing. J Bacteriol 180: 3988-3991.
-
(1998)
J Bacteriol
, vol.180
, pp. 3988-3991
-
-
Mongkolsuk, S.1
Sukchawalit, R.2
Loprasert, S.3
Praituan, W.4
Upaichit, A.5
-
42
-
-
0006198640
-
Hydrogen peroxide-inducible proteins in Salmonella typhimurium overlap with heat shock and other stress proteins
-
Morgan, R.W., Christman, M.F., Jacobson, F.S., Storz, G., and Ames, B.N. (1986) Hydrogen peroxide-inducible proteins in Salmonella typhimurium overlap with heat shock and other stress proteins. Proc Natl Acad Sci USA 83: 8059-8063.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 8059-8063
-
-
Morgan, R.W.1
Christman, M.F.2
Jacobson, F.S.3
Storz, G.4
Ames, B.N.5
-
43
-
-
25144502935
-
Genome-wide transcription profiling of the early phase of biofilm formation by Candida albicans
-
Murillo, L.A., Newport, G., Lan, C.Y., Habelitz, S., Dungan, J., and Agabian, N.M. (2005) Genome-wide transcription profiling of the early phase of biofilm formation by Candida albicans. Eukaryot Cell 4: 1562-1573.
-
(2005)
Eukaryot Cell
, vol.4
, pp. 1562-1573
-
-
Murillo, L.A.1
Newport, G.2
Lan, C.Y.3
Habelitz, S.4
Dungan, J.5
Agabian, N.M.6
-
44
-
-
15044354564
-
Expression of a peroxiredoxin-glutaredoxin by Haemophilus influenzae in biofilms and during human respiratory tract infection
-
Murphy, T.F., Kirkham, C., Sethi, S., and Lesse, A.J. (2005) Expression of a peroxiredoxin-glutaredoxin by Haemophilus influenzae in biofilms and during human respiratory tract infection. FEMS Immunol Med Microbiol 44: 81-89.
-
(2005)
FEMS Immunol Med Microbiol
, vol.44
, pp. 81-89
-
-
Murphy, T.F.1
Kirkham, C.2
Sethi, S.3
Lesse, A.J.4
-
45
-
-
0033874090
-
Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpF
-
Ochsner, U.A., Vasil, M.L., Alsabbagh, E., Parvatiyar, K., and Hassett, D.J. (2000) Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpF. J Bacteriol 182: 4533-4544.
-
(2000)
J Bacteriol
, vol.182
, pp. 4533-4544
-
-
Ochsner, U.A.1
Vasil, M.L.2
Alsabbagh, E.3
Parvatiyar, K.4
Hassett, D.J.5
-
46
-
-
0037931788
-
Purification and characterization of a chimeric enzyme from Haemophilus influenzae Rd that exhibits glutathione-dependent peroxidase activity
-
Pauwels, F., Vergauwen, B., Vanrobaeys, F., Devreese, B., and Van Beeumen, J.J. (2003) Purification and characterization of a chimeric enzyme from Haemophilus influenzae Rd that exhibits glutathione-dependent peroxidase activity. J Biol Chem 278: 16658-16666.
-
(2003)
J Biol Chem
, vol.278
, pp. 16658-16666
-
-
Pauwels, F.1
Vergauwen, B.2
Vanrobaeys, F.3
Devreese, B.4
Van Beeumen, J.J.5
-
47
-
-
1842425714
-
Physiological characterization of Haemophilus influenzae Rd deficient in its glutathione-dependent peroxidase PGdx
-
Pauwels, F., Vergauwen, B., and Van Beeumen, J.J. (2004) Physiological characterization of Haemophilus influenzae Rd deficient in its glutathione-dependent peroxidase PGdx. J Biol Chem 279: 12163-12170.
-
(2004)
J Biol Chem
, vol.279
, pp. 12163-12170
-
-
Pauwels, F.1
Vergauwen, B.2
Van Beeumen, J.J.3
-
48
-
-
0035283587
-
Redox-operated genetic switches: The SoxR and OxyR transcription factors
-
Pomposiello, P.J., and Demple, B. (2001) Redox-operated genetic switches: the SoxR and OxyR transcription factors. Trends Biotechnol 19: 109-114.
-
(2001)
Trends Biotechnol
, vol.19
, pp. 109-114
-
-
Pomposiello, P.J.1
Demple, B.2
-
49
-
-
0035985625
-
Global adjustment of microbial physiology during free radical stress
-
Pomposiello, P.J., and Demple, B. (2002) Global adjustment of microbial physiology during free radical stress. Adv Microb Physiol 46: 319-341.
-
(2002)
Adv Microb Physiol
, vol.46
, pp. 319-341
-
-
Pomposiello, P.J.1
Demple, B.2
-
50
-
-
9744232974
-
Bacterial defenses against oxidants: Mechanistic features of cysteine-based peroxidases and their flavoprotein reductases
-
Poole, L.B. (2005) Bacterial defenses against oxidants: mechanistic features of cysteine-based peroxidases and their flavoprotein reductases. Arch Biochem Biophys 433: 240-254.
-
(2005)
Arch Biochem Biophys
, vol.433
, pp. 240-254
-
-
Poole, L.B.1
-
51
-
-
0030941829
-
The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm
-
Prinz, W.A., Aslund, F., Holmgren, A., and Beckwith, J. (1997) The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm. J Biol Chem 272: 15661-15667.
-
(1997)
J Biol Chem
, vol.272
, pp. 15661-15667
-
-
Prinz, W.A.1
Aslund, F.2
Holmgren, A.3
Beckwith, J.4
-
52
-
-
0032520905
-
Concurrent production of reactive oxygen and nitrogen species by airway epithelial cells in vitro
-
Rochelle, L.G., Fischer, B.M., and Adler, K.B. (1998) Concurrent production of reactive oxygen and nitrogen species by airway epithelial cells in vitro. Free Radic Biol Med 24: 863-868.
-
(1998)
Free Radic Biol Med
, vol.24
, pp. 863-868
-
-
Rochelle, L.G.1
Fischer, B.M.2
Adler, K.B.3
-
53
-
-
0142153396
-
Molecular and catalytic properties of a peroxiredoxin-glutaredoxin hybrid from Neisseria meningitidis
-
Rouhier, N., and Jacquot, J.P. (2003) Molecular and catalytic properties of a peroxiredoxin-glutaredoxin hybrid from Neisseria meningitidis. FEBS Lett 554: 149-153.
-
(2003)
FEBS Lett
, vol.554
, pp. 149-153
-
-
Rouhier, N.1
Jacquot, J.P.2
-
54
-
-
0023850178
-
Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase
-
Saiki, R.K., Gelfand, D.H., Stoffel, S., Scharf, S.J., Higuchi, R., Horn, G.T., et al. (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239: 487-491.
-
(1988)
Science
, vol.239
, pp. 487-491
-
-
Saiki, R.K.1
Gelfand, D.H.2
Stoffel, S.3
Scharf, S.J.4
Higuchi, R.5
Horn, G.T.6
-
55
-
-
0004136246
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Maniatis, T., and Fritsch, E.F. (1989) Molecular cloning: A Laboratory Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Maniatis, T.2
Fritsch, E.F.3
-
56
-
-
32244448921
-
Transcriptional and translational expression patterns associated with immobilized growth of Campylobacter jejuni
-
Sampathkumar, B., Napper, S., Carrillo, C.D., Willson, P., Taboada, E., Nash, J.H., et al. (2006) Transcriptional and translational expression patterns associated with immobilized growth of Campylobacter jejuni. Microbiology 152: 567-577.
-
(2006)
Microbiology
, vol.152
, pp. 567-577
-
-
Sampathkumar, B.1
Napper, S.2
Carrillo, C.D.3
Willson, P.4
Taboada, E.5
Nash, J.H.6
-
57
-
-
0036157549
-
Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm
-
Sauer, K., Camper, A.K., Ehrlich, G.D., Costerton, J.W., and Davies, D.G. (2002) Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm. J Bacteriol 184: 1140-1154.
-
(2002)
J Bacteriol
, vol.184
, pp. 1140-1154
-
-
Sauer, K.1
Camper, A.K.2
Ehrlich, G.D.3
Costerton, J.W.4
Davies, D.G.5
-
58
-
-
0037378547
-
Differential expression of the Escherichia coli autoaggregation factor antigen 43
-
Schembri, M.A., Hjerrild, L., Gjermansen, M., and Klemm, P. (2003) Differential expression of the Escherichia coli autoaggregation factor antigen 43. J Bacteriol 185: 2236-2242.
-
(2003)
J Bacteriol
, vol.185
, pp. 2236-2242
-
-
Schembri, M.A.1
Hjerrild, L.2
Gjermansen, M.3
Klemm, P.4
-
59
-
-
0028128416
-
NO at work
-
Schmidt, H.H., and Walter, U. (1994) NO at work. Cell 78: 919-925.
-
(1994)
Cell
, vol.78
, pp. 919-925
-
-
Schmidt, H.H.1
Walter, U.2
-
60
-
-
0035209075
-
Alkyl hydroperoxide reductase is the primary scavenger of endogenous hydrogen peroxide in Escherichia coli
-
Seaver, L.C., and Imlay, J.A. (2001) Alkyl hydroperoxide reductase is the primary scavenger of endogenous hydrogen peroxide in Escherichia coli. J Bacteriol 183: 7173-7181.
-
(2001)
J Bacteriol
, vol.183
, pp. 7173-7181
-
-
Seaver, L.C.1
Imlay, J.A.2
-
61
-
-
3042842612
-
Defenses against oxidative stress in Neisseria gonorrhoeae and Neisseria meningitidis: Distinctive systems for different lifestyles
-
Seib, K.L., Tseng, H.J., McEwan, A.G., Apicella, M.A., and Jennings, M.P. (2004) Defenses against oxidative stress in Neisseria gonorrhoeae and Neisseria meningitidis: distinctive systems for different lifestyles. J Infect Dis 190: 136-147.
-
(2004)
J Infect Dis
, vol.190
, pp. 136-147
-
-
Seib, K.L.1
Tseng, H.J.2
McEwan, A.G.3
Apicella, M.A.4
Jennings, M.P.5
-
62
-
-
0037162478
-
The outer membrane localization of the Neisseria gonorrhoeae MsrA/B is involved in survival against reactive oxygen species
-
Skaar, E.P., Tobiason, D.M., Quick, J., Judd, R.C., Weissbach, H., Etienne, F., et al. (2002) The outer membrane localization of the Neisseria gonorrhoeae MsrA/B is involved in survival against reactive oxygen species. Proc Natl Acad Sci USA 99: 10108-10113.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 10108-10113
-
-
Skaar, E.P.1
Tobiason, D.M.2
Quick, J.3
Judd, R.C.4
Weissbach, H.5
Etienne, F.6
-
63
-
-
0038048164
-
Statistical issues in cDNA microarray data analysis
-
Smyth, G.K., Yang, Y.H., and Speed, T. (2003) Statistical issues in cDNA microarray data analysis. Methods Mol Biol 224: 111-136.
-
(2003)
Methods Mol Biol
, vol.224
, pp. 111-136
-
-
Smyth, G.K.1
Yang, Y.H.2
Speed, T.3
-
64
-
-
26944437951
-
The transcriptome response of Neisseria gonorrhoeae to hydrogen peroxide reveals genes with previously uncharacterized roles in oxidative damage protection
-
Stohl, E.A., Criss, A.K., and Seifert, H.S. (2005) The transcriptome response of Neisseria gonorrhoeae to hydrogen peroxide reveals genes with previously uncharacterized roles in oxidative damage protection. Mol Microbiol 58: 520-532.
-
(2005)
Mol Microbiol
, vol.58
, pp. 520-532
-
-
Stohl, E.A.1
Criss, A.K.2
Seifert, H.S.3
-
66
-
-
0024604234
-
An alkyl hydroperoxide reductase induced by oxidative stress in Salmonella typhimurium and Escherichia coli: Genetic characterization and cloning of ahp
-
Storz, G., Jacobson, F.S., Tartaglia, L.A., Morgan, R.W., Silveira, L.A., and Ames, B.N. (1989) An alkyl hydroperoxide reductase induced by oxidative stress in Salmonella typhimurium and Escherichia coli: genetic characterization and cloning of ahp. J Bacteriol 171: 2049-2055.
-
(1989)
J Bacteriol
, vol.171
, pp. 2049-2055
-
-
Storz, G.1
Jacobson, F.S.2
Tartaglia, L.A.3
Morgan, R.W.4
Silveira, L.A.5
Ames, B.N.6
-
67
-
-
0025214474
-
Transcriptional regulator of oxidative stress-inducible genes: Direct activation by oxidation
-
Storz, G., Tartaglia, L.A., and Ames, B.N. (1990) Transcriptional regulator of oxidative stress-inducible genes: direct activation by oxidation. Science 248: 189-194.
-
(1990)
Science
, vol.248
, pp. 189-194
-
-
Storz, G.1
Tartaglia, L.A.2
Ames, B.N.3
-
68
-
-
0026063653
-
Control of pilus expression in Neisseria gonorrhoeae as an original system in the family of two-component regulators
-
Taha, M.K., Dupuy, B., Saurin, W., So, M., and Marchal, C. (1991) Control of pilus expression in Neisseria gonorrhoeae as an original system in the family of two-component regulators. Mol Microbiol 5: 137-148.
-
(1991)
Mol Microbiol
, vol.5
, pp. 137-148
-
-
Taha, M.K.1
Dupuy, B.2
Saurin, W.3
So, M.4
Marchal, C.5
-
69
-
-
0034629478
-
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58
-
Tettelin, H., Saunders, N.J., Heidelberg, J., Jeffries, A.C., Nelson, K.E., Eisen, J.A., et al. (2000) Complete genome sequence of Neisseria meningitidis serogroup B strain MC58. Science 287: 1809-1815.
-
(2000)
Science
, vol.287
, pp. 1809-1815
-
-
Tettelin, H.1
Saunders, N.J.2
Heidelberg, J.3
Jeffries, A.C.4
Nelson, K.E.5
Eisen, J.A.6
-
70
-
-
0028023175
-
Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: A mechanism for differential promoter selection
-
Toledano, M.B., Kullik, I., Trinh, F., Baird, P.T., Schneider, T.D., and Storz, G. (1994) Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: a mechanism for differential promoter selection. Cell 78: 897-909.
-
(1994)
Cell
, vol.78
, pp. 897-909
-
-
Toledano, M.B.1
Kullik, I.2
Trinh, F.3
Baird, P.T.4
Schneider, T.D.5
Storz, G.6
-
71
-
-
0034973791
-
Accumulation of manganese in Neisseria gonorrhoeae correlates with resistance to oxidative killing by superoxide anion and is independent of superoxide dismutase activity
-
Tseng, H.J., Srikhanta, Y., McEwan, A.G., and Jennings, M.P. (2001) Accumulation of manganese in Neisseria gonorrhoeae correlates with resistance to oxidative killing by superoxide anion and is independent of superoxide dismutase activity. Mol Microbiol 40: 1175-1186.
-
(2001)
Mol Microbiol
, vol.40
, pp. 1175-1186
-
-
Tseng, H.J.1
Srikhanta, Y.2
McEwan, A.G.3
Jennings, M.P.4
-
72
-
-
0037223059
-
OxyR acts as a repressor of catalase expression in Neisseria gonorrhoeae
-
Tseng, H.J., McEwan, A.G., Apicella, M.A., and Jennings, M.P. (2003) OxyR acts as a repressor of catalase expression in Neisseria gonorrhoeae. Infect Immun 71: 550-556.
-
(2003)
Infect Immun
, vol.71
, pp. 550-556
-
-
Tseng, H.J.1
McEwan, A.G.2
Apicella, M.A.3
Jennings, M.P.4
-
73
-
-
0042569023
-
A novel cytochrome c peroxidase from Neisseria gonorrhoeae, a lipoprotein from a Gram-negative bacterium
-
Turner, S.M., Reid, E.G., Smith, H., and Cole, J.A. (2003) A novel cytochrome c peroxidase from Neisseria gonorrhoeae, a lipoprotein from a Gram-negative bacterium. Biochem J 373: 865-873.
-
(2003)
Biochem J
, vol.373
, pp. 865-873
-
-
Turner, S.M.1
Reid, E.G.2
Smith, H.3
Cole, J.A.4
-
74
-
-
0035877729
-
Characterization of clutathione amide reductase from Chromatium gracile. Identification of a novel thiol peroxidase (Prx/Grx) fueled by glutathione amide redox cycling
-
Vergauwen, B., Pauwels, F., Jacquemotte, F., Meyer, T.E., Cusanovich, M.A., Bartsch, R.G., and Van Beeumen, J.J. (2001) Characterization of clutathione amide reductase from Chromatium gracile. Identification of a novel thiol peroxidase (Prx/Grx) fueled by glutathione amide redox cycling. J Biol Chem 276: 20890-20897.
-
(2001)
J Biol Chem
, vol.276
, pp. 20890-20897
-
-
Vergauwen, B.1
Pauwels, F.2
Jacquemotte, F.3
Meyer, T.E.4
Cusanovich, M.A.5
Bartsch, R.G.6
Van Beeumen, J.J.7
-
75
-
-
0037369926
-
Exogenous glutathione completes the defense against oxidative stress in Haemophilus influenzae
-
Vergauwen, B., Pauwels, F., Vaneechoutte, M., and Van Beeumen, J.J. (2003) Exogenous glutathione completes the defense against oxidative stress in Haemophilus influenzae. J Bacteriol 185: 1572-1581.
-
(2003)
J Bacteriol
, vol.185
, pp. 1572-1581
-
-
Vergauwen, B.1
Pauwels, F.2
Vaneechoutte, M.3
Van Beeumen, J.J.4
-
76
-
-
11144342769
-
Trigger factor in Streptococcus mutans is involved in stress tolerance, competence development, and biofilm formation
-
Wen, Z.T., Suntharaligham, P., Cvitkovitch, D.G., and Burne, R.A. (2005) Trigger factor in Streptococcus mutans is involved in stress tolerance, competence development, and biofilm formation. Infect Immun 73: 219-225.
-
(2005)
Infect Immun
, vol.73
, pp. 219-225
-
-
Wen, Z.T.1
Suntharaligham, P.2
Cvitkovitch, D.G.3
Burne, R.A.4
-
77
-
-
0002839521
-
Hydrogen peroxide formation and catalase activity in the lactic acid bacteria
-
Whittenbury, R. (1964) Hydrogen peroxide formation and catalase activity in the lactic acid bacteria. J Gen Microbiol 35: 13-26.
-
(1964)
J Gen Microbiol
, vol.35
, pp. 13-26
-
-
Whittenbury, R.1
-
78
-
-
0029820565
-
Peptide methionine sulfoxide reductase contributes to the maintenance of adhesins in three major pathogens
-
Wizemann, T.M., Moskovitz, J., Pearce, B.J., Cundell, D., Arvidson, C.G., So, M., et al. (1996) Peptide methionine sulfoxide reductase contributes to the maintenance of adhesins in three major pathogens. Proc Natl Acad Sci USA 93: 7985-7990.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 7985-7990
-
-
Wizemann, T.M.1
Moskovitz, J.2
Pearce, B.J.3
Cundell, D.4
Arvidson, C.G.5
So, M.6
-
79
-
-
0037222255
-
Structure, mechanism and regulation of peroxiredoxins
-
Wood, Z.A., Schroder, E., Robin Harris, J., and Poole, L.B. (2003) Structure, mechanism and regulation of peroxiredoxins. Trends Biochem Sci 28: 32-40.
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 32-40
-
-
Wood, Z.A.1
Schroder, E.2
Robin Harris, J.3
Poole, L.B.4
-
80
-
-
33645301312
-
PerR controls Mn-dependent resistance to oxidative stress in Neisseria gonorrhoeae
-
Wu, H.J., Seib, K.L., Srikhanta, Y.N., Kidd, S.P., Edwards, J.L., Maguire, T.L., et al. (2006) PerR controls Mn-dependent resistance to oxidative stress in Neisseria gonorrhoeae. Mol Microbiol 60: 401-416.
-
(2006)
Mol Microbiol
, vol.60
, pp. 401-416
-
-
Wu, H.J.1
Seib, K.L.2
Srikhanta, Y.N.3
Kidd, S.P.4
Edwards, J.L.5
Maguire, T.L.6
-
81
-
-
0026662439
-
Regulation of catalase in Neisseria gonorrhoeae. Effects of oxidant stress and exposure to human neutrophils
-
Zheng, H.Y., Hassett, D.J., Bean, K., and Cohen, M.S. (1992) Regulation of catalase in Neisseria gonorrhoeae. Effects of oxidant stress and exposure to human neutrophils. J Clin Invest 90: 1000-1006.
-
(1992)
J Clin Invest
, vol.90
, pp. 1000-1006
-
-
Zheng, H.Y.1
Hassett, D.J.2
Bean, K.3
Cohen, M.S.4
-
82
-
-
0032513362
-
Activation of the OxyR transcription factor by reversible disulfide bond formation
-
Zheng, M., Aslund, F., and Storz, G. (1998) Activation of the OxyR transcription factor by reversible disulfide bond formation. Science 279: 1718-1721.
-
(1998)
Science
, vol.279
, pp. 1718-1721
-
-
Zheng, M.1
Aslund, F.2
Storz, G.3
-
83
-
-
0034943657
-
Computation-directed identification of OxyR DNA binding sites in Escherichia coli
-
Zheng, M., Wang, X., Doan, B., Lewis, K.A., Schneider, T.D., and Storz, G. (2001a) Computation-directed identification of OxyR DNA binding sites in Escherichia coli. J Bacteriol 183: 4571-4579.
-
(2001)
J Bacteriol
, vol.183
, pp. 4571-4579
-
-
Zheng, M.1
Wang, X.2
Doan, B.3
Lewis, K.A.4
Schneider, T.D.5
Storz, G.6
-
84
-
-
0034932337
-
DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide
-
Zheng, M., Wang, X., Templeton, L.J., Smulski, D.R., LaRossa, R.A., and Storz, G. (2001b) DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide. J Bacteriol 183: 4562-4570.
-
(2001)
J Bacteriol
, vol.183
, pp. 4562-4570
-
-
Zheng, M.1
Wang, X.2
Templeton, L.J.3
Smulski, D.R.4
LaRossa, R.A.5
Storz, G.6
|