Affinity chromatography of GroEL chaperonin based on denatured proteins: Role of electrostatic interactions in regulation of GroEL affinity for protein substrates

Biochemistry (Moscow)

Volumn 71, Issue 12, 2006, Pages 1357-1364

  Marchenko, N Yu ^a,b   Marchenkov, V V ^a   Kaysheva, A L ^a   Kashparov, I A ^a   Kotova, N V ^a   Kaliman, P A ^b   Semisotnov, G V ^a  

^a INSTITUTE OF PROTEIN RESEARCH   (Russian Federation)

^b V N KARAZIN KHARKIV NATIONAL UNIVERSITY   (Ukraine)

Author keywords

Affinity chromatography; Chaperonins; GroEL; Protein protein interactions

Indexed keywords

AFFINITY CHROMATOGRAPHY; ANISOTROPY; ASSOCIATION REACTIONS; CONCENTRATION (PROCESS); CONFORMATIONS; ELECTROSTATICS; IONIC STRENGTH; SUBSTRATES;

CHAPERONINS; ELECTROSTATIC INTERACTIONS; FLUORESCENCE ANISOTROPY; GROEL; PROTEIN-PROTEIN INTERACTIONS;

PROTEINS;

ESCHERICHIA COLI;

CALCIUM; CHAPERONIN; DIVALENT CATION; ESCHERICHIA COLI PROTEIN; GROE PROTEIN, E COLI; HEAT SHOCK PROTEIN; MAGNESIUM; UNCLASSIFIED DRUG;

AFFINITY CHROMATOGRAPHY; ARTICLE; CHEMISTRY; ELECTRICITY; ESCHERICHIA COLI; HYDROPHOBICITY; ISOLATION AND PURIFICATION; OSMOLARITY; PROTEIN DENATURATION;

CALCIUM; CATIONS, DIVALENT; CHAPERONINS; CHROMATOGRAPHY, AFFINITY; ELECTROSTATICS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; HEAT-SHOCK PROTEINS; HYDROPHOBICITY; MAGNESIUM; OSMOLAR CONCENTRATION; PROTEIN DENATURATION;

EID: 33845651724     PISSN: 00062979     EISSN: 16083040     Source Type: Journal    
DOI: 10.1134/S000629790612011X     Document Type: Article

References (44)

1. Braig, K., Otwinowski, Z., Hegde, R., Boisvert, D. C., Joachimiak, A., Horwich, A. L., and Sigler, P. B. (1994) Nature, 371, 578-586.
2. Bills, R. J. (1996) Cell Stress. Chaperones, 1, 155-160.
3. Goloubinoff, P., Gatenby, A. A., and Lorimer, G. H. (1989) Nature, 337, 44-47.
4. Viitanen, P. V., Gatenby, A. A., and Lorimer, G. H. (1992) Protein Sci., 1, 363-369.
5. Gething, M. J., and Sambrook, J. (1992) Nature, 355, 33-45.
6. Kandror, O., Sherman, M., and Goldberg, A. (1999) J. Biol Chem., 274, 37743-37749.
7. Fenton, W. A., Kashi, Y., Furtak, K., and Horwich, A. L. (1994) Nature, 371, 614-619.
8. Lin, Z., Schwartz, F. P., and Eisenstein, E. (1995) J. Biol. Chem., 270, 1011-1014.
9. Aoki, K., Taguchi, H., Shindo, Y., Yoshida, M., Ogasahara, K., Yutani, K., and Tanaka, N. (1997) J. Biol. Chem., 272, 32158-32162.
10. Katsumata, K., Okazaki, A., Tsurupa, G. P., and Kuwajima, K. (1996) J. Mol. Biol., 264, 643-649.
11. Pack, C. G., Aoki, K., Taguchi, H., Yoshida, M., Kinjo, M., and Tamura, M. (2000) Biochem. Biophys. Res. Commun., 267, 300-304.
12. Goloubinoff, P., Christeller, J. T., Gatenby, A. A., and Lorimer, G. H. (1989) Nature, 342, 884-889.
13. Viitanen, P. V., Lubben, T. H., Reed, J., Goloubinoff, P., O'Keefe, D. P., and Lorimer, G. H. (1990) Biochemistry, 29, 5665-5671.
14. Xu, Z., Horwich, A. L., and Sigler, P. B. (1997) Nature, 388, 741-750.
15. Fenton, W. A., and Horwich, A. L. (1997) Protein Sci., 6, 743-760.
16. Todd, M. J., Viitanen, P. V., and Lorimer, G. H. (1994) Science, 265, 659-666.
17. Jackson, G. S., Staniforth, R. A., Halsall, D. J., Atkinson, T., Holbrook, J. J., Clarke, A. R., and Burston, S. G. (1993) Biochemistry, 32, 2554-2563.
18. Makio, T., Arai, M., and Kuwajima, K. (1999) J. Mol. Biol., 293, 125-137.
19. Staniforth, R. A., Burston, S. G., Atkinson, T., and Clarke, A. R. (1994) Biochem. J., 300, 651-658.
20. Marchenko, N. Yu., Marchenkov, V. V., Kotova, N. V., Semisotnov, G. V., Bulankina, N. I., and Kaliman, P. A. (2003) Ukr. Biokhim. Zh., 75, 88-94.
21. Marchenkov, V V., Sokolovskii, I. V., Kotova, N. V., Galzitskaya, O. V., Bochkareva, E. S., Girshovich, E. S., and Semisotnov, G. V. (2004) Biofizika, 49, 987-994.
22. Martin, J., Langer, T., Boteva, R., Schramel, A., Horwich, A. L., and Hartl, F. U. (1991) Nature, 352, 36-42.
23. Katsumata, K., Okazaki, A., and Kuwajima, K. (1996) J. Mol. Biol., 258, 827-838.
24. Kozlov, L. V., Meshcheryakova, E. A., Zavada, L. L., Efremov, E. S., and Rashkovetskii, L. G. (1979) Biokhimiya, 44, 338-349.
25. Stellwagen, E., Rysavy, R., and Babul, G. (1972) J. Biol. Chem., 247, 8074-8077.
26. Fisher, W R., Taniuchi, H., and Anfmsen, C. B. (1973) J. Biol. Chem., 248, 3188-3195.
27. Creamer, L. K., Richardson, T., and Parry, D. A. (1981) Arch. Biochem. Biophys., 211, 689-696.
28. Livney, Y. D., Schwan, A. L., and Dalgleish, D. G. (2004) J. Dairy Sci., 87, 3638-3647.
29. Ewbank, J. J., and Creighton, T. E. (1993) Biochemistry, 32, 3694-3707.
30. Gekko, K., Kimoto, A., and Kamiyama, T. (2003) Biochemistry, 42, 13746-13753.
31. Eveis, M. E., Huhse, B., Titorenko, V I., Kunau, W H., Hartl, F. U., Harder, W., and Veenhuis, M. (1993) FEBS Lett., 321, 32-36.
32. Lissin, N. M., Venyaminov, S. Y., and Girshovich, A. S. (1990) Nature, 348, 339-342.
33. Murai, N., Makino, Y., and Yoshida, M. (1996) J. Biol. Chem., 271, 28229-28234.
34. Laemmli, U. K. (1970) Nature, 227, 680-685.
35. Marchenko, N. Yu., Marchenkov, V V., Kaysheva, A. L., Kashparov, I. A., Kotova, N. V., Kaliman, P A., and Semisotnov, G. V (2005) Vestn. Kharkov Univ. Ser. Biol., 709, 48-55.
36. Axen, R., Porath, J., and Ernback, S. (1967) Nature, 214, 1302-1304.
37. Lanzetta, P. A., Alvarez, L. J., Reinach, P. S., and Candia, O.A. (1979) Analyt. Stochem., 100, 95-97.
38. Lakovich, J. (1986) Fundamentals of Fluorescent Spectroscopy [Russian translation], Mir, Moscow.
39. Semisotnov, G. V., Rodionova, N. A., Razgulyaev, O. I., Uversky, V. N., Gripas', A. F., and Gilmanshin, R. I. (1991) Biopolymers, 31, 119-128.
40. Marchenko, N. Yu., Marchenkov, V. V., Kotova, N. V., Kaliman, P. A., and Semisotnov, G. V. (2005) Vestn. Kharkov Univ. Biofiz. Vestn., 665, 53-56.
41. Osterman, L. A. (1985) Chromatography of Proteins and Nucleic Acids [in Russian], Nauka, Moscow.
42. Pack, C. G., Nishimura, G., Tamura, M., Aoki, K., Taguchi, H., Yoshida, M., and Kinjo, M. (1999) Cytometry, 36, 247-253.
43. Surin, A. K., Kotova, N. V., Kashparov, I. A., Marchenkov, V. V., Marchenkova, S. Y., and Semisotnov, G. V. (1997) FEBS Lett., 405, 260-262.
44. Azem, A., Diamant, S., and Goloubinoff, P. (1994) Biochemistry, 33, 6671-6675.