Cloning of hif-1α and hif-2α and mRNA expression pattern during development in zebrafish

Gene Expression Patterns

Volumn 7, Issue 3, 2007, Pages 339-345

  Rojas, Diego A ^a,b   Perez Munizaga, Daniela A ^a,b   Centanin, Lazaro ^b,c   Antonelli, Marcelo ^a,b,d   Wappner, Pablo ^b,c   Allende, Miguel L ^a,b   Reyes, Ariel E ^a,b  

^a UNIVERSIDAD DIEGO PORTALES   (Chile)

^b UNIVERSITY OF CHILE   (Chile)

^c UNIVERSIDAD DE BUENOS AIRES   (Argentina)

^d UNIVERSITY OF CHILE   (Chile)

Author keywords

Blood vessels; Brain; Cartilage; Dorsal aorta; Hypoxia inducible factor; Intersegmental vessels; Neuromasts; Notochord; Optic tectum; Ventricle epithelia; Zebrafish

Indexed keywords

HYPOXIA INDUCIBLE FACTOR 1ALPHA; HYPOXIA INDUCIBLE FACTOR 2ALPHA; MESSENGER RNA; OXYGEN; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR; ENDOTHELIAL PAS DOMAIN CONTAINING PROTEIN 1; ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1; ZEBRAFISH PROTEIN;

ANGIOGENESIS; ANIMAL CELL; ARTICLE; BLOOD VESSEL; BRAIN TISSUE; CONTROLLED STUDY; DEVELOPMENTAL STAGE; EMBRYO; EMBRYO DEVELOPMENT; EXPRESSED SEQUENCE TAG; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE FUNCTION; GENETIC TRANSCRIPTION; HEART; HEART DEVELOPMENT; HYPOXIA; MOLECULAR CLONING; MOLECULAR MECHANICS; NERVOUS SYSTEM DEVELOPMENT; NONHUMAN; NOTOCHORD; NUCLEOTIDE SEQUENCE; OXYGEN TENSION; PHYLOGENETIC TREE; PRIORITY JOURNAL; PROTEIN DOMAIN; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE; VERTEBRATE; ZEBRA FISH; ANIMAL; ANIMAL EMBRYO; ANTIBODY SPECIFICITY; GENE EXPRESSION PROFILING; GENETICS; IN SITU HYBRIDIZATION; METABOLISM; PHYLOGENY; PRENATAL DEVELOPMENT;

DANIO RERIO; VERTEBRATA;

ANIMALS; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; CLONING, MOLECULAR; EMBRYO, NONMAMMALIAN; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; HYPOXIA-INDUCIBLE FACTOR 1, ALPHA SUBUNIT; IN SITU HYBRIDIZATION; ORGAN SPECIFICITY; PHYLOGENY; ZEBRAFISH; ZEBRAFISH PROTEINS;

EID: 33751522873     PISSN: 1567133X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.modgep.2006.08.002     Document Type: Article

References (35)

1. Bever M.M., and Fekete D.M. Atlas of the developing inner ear in zebrafish. Dev. Dyn. 223 (2002) 536-543
2. Bruick R.K. Oxygen sensing in the hypoxic response pathway: regulation of the hypoxia-inducible transcription factor. Genes Dev. 17 (2003) 2614-2623
3. Catron T., Mendiola M.A., Smith S.M., Born J., and Walker M.K. Hypoxia regulates avian cardiac Arnt and HIF-1alpha mRNA expression. Biochem. Biophys. Res. Commun. 282 (2001) 602-607
4. Chen W.Y., John J.A., Lin C.H., and Chang C.Y. Molecular cloning and developmental expression of zinc finger transcription factor MTF-1 gene in zebrafish, Danio rerio. Biochem. Biophys. Res. Commun. 291 (2002) 798-805
5. Compernolle V., Brusselmans K., Acker T., Hoet P., Tjwa M., Beck H., Plaisance S., Dor Y., Keshet E., Lupu F., Nemery B., Dewerchin M., Van Veldhoven P., Plate K., Moons L., Collen D., and Carmeliet P. Loss of HIF-2alpha and inhibition of VEGF impair fetal lung maturation, whereas treatment with VEGF prevents fatal respiratory distress in premature mice. Nat. Med. 8 (2002) 702-710
6. Elvert G., Lanz S., Kappel A., and Flamme I. mRNA cloning and expression studies of the quail homologue of HIF-2alpha. Mech. Dev. 87 (1999) 193-197
7. Ema M., Taya S., Yokotani N., Sogawa K., Matsuda Y., and Fujii-Kuriyama Y. A novel bHLH-PAS factor with close sequence similarity to hypoxia-inducible factor 1alpha regulates the VEGF expression and is potentially involved in lung and vascular development. Proc. Natl. Acad. Sci. USA 94 (1997) 4273-4278
8. Flamme I., Frohlich T., von Reutern M., Kappel A., Damert A., and Risau W. HRF, a putative basic helix-loop-helix-PAS-domain transcription factor is closely related to hypoxia-inducible factor-1 alpha and developmentally expressed in blood vessels. Mech. Dev. 63 (1997) 51-60
9. Haffter P., Granato M., Brand M., Mullins M.C., Hammerschmidt M., Kane D.A., Odenthal J., van Eeden F.J., Jiang Y.J., Heisenberg C.P., Kelsh R.N., Furutani-Seiki M., Vogelsang E., Beuchle D., Schach U., Fabian C., and Nusslein-Volhard C. The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development 123 (1996) 1-36
10. Iyer N.V., Kotch L.E., Agani F., Leung S.W., Laughner E., Wenger R.H., Gassmann M., Gearhart J.D., Lawler A.M., Yu A.Y., and Semenza G.L. Cellular and developmental control of O2 homeostasis by hypoxia-inducible factor 1 alpha. Genes Dev. 12 (1998) 149-162
11. Iyer N.V., Leung S.W., and Semenza G.L. The human hypoxia-inducible factor 1alpha gene: HIF1A structure and evolutionary conservation. Genomics 52 (1998) 159-165
12. Jain S., Maltepe E., Lu M.M., Simon C., and Bradfield C.A. Expression of ARNT, ARNT2, HIF1 alpha, HIF2 alpha and Ah receptor mRNAs in the developing mouse. Mech. Dev. 73 (1998) 117-123
13. Jowett T., and Lettice L. Whole-mount in situ hybridizations on zebrafish embryos using a mixture of digoxigenin- and fluorescein-labelled probes. Trends Genet. 10 (1994) 73-74
14. Kimmel C.B., Ballard W.W., Kimmel S.R., Ullmann B., and Schilling T.F. Stages of embryonic development of the zebrafish. Dev. Dyn. 203 (1995) 253-310
15. Kotch L.E., Iyer N.V., Laughner E., and Semenza G.L. Defective vascularization of HIF-1alpha-null embryos is not associated with VEGF deficiency but with mesenchymal cell death. Dev. Biol. 209 (1999) 254-267
16. Lawson N.D., and Weinstein B.M. In vivo imaging of embryonic vascular development using transgenic zebrafish. Dev. Biol. 248 (2002) 307-318
17. Lee Y.M., Jeong C.H., Koo S.Y., Son M.J., Song H.S., Bae S.K., Raleigh J.A., Chung H.Y., Yoo M.A., and Kim K.W. Determination of hypoxic region by hypoxia marker in developing mouse embryos in vivo: a possible signal for vessel development. Dev. Dyn. 220 (2001) 175-186
18. Lee J.W., Bae S.H., Jeong J.W., Kim S.H., and Kim K.W. Hypoxia-inducible factor (HIF-1)alpha: its protein stability and biological functions. Exp. Mol. Med. 36 (2004) 1-12
19. Luo G., Gu Y.Z., Jain S., Chan W.K., Carr K.M., Hogenesch J.B., and Bradfield C.A. Molecular characterization of the murine Hif-1 alpha locus. Gene Expr. 6 (1997) 287-299
20. Mackenzie N.C., Brito M., Reyes A.E., and Allende M.L. Cloning, expression pattern and essentiality of the high-affinity copper transporter 1 (ctr1) gene in zebrafish. Gene 328 (2004) 113-120
21. Madan A., Varma S., and Cohen H.J. Developmental stage-specific expression of the alpha and beta subunits of the HIF-1 protein in the mouse and human fetus. Mol. Genet. Metab. 75 (2002) 244-249
22. Maltepe E., Schmidt J.V., Baunoch D., Bradfield C.A., and Simon M.C. Abnormal angiogenesis and responses to glucose and oxygen deprivation in mice lacking the protein ARNT. Nature 386 (1997) 403-407
23. Peng J., Zhang L., Drysdale L., and Fong G.H. The transcription factor EPAS-1/hypoxia-inducible factor 2alpha plays an important role in vascular remodeling. Proc. Natl. Acad. Sci. USA 97 (2000) 8386-8391
24. Pugh C.W., and Ratcliffe P.J. Regulation of angiogenesis by hypoxia: role of the HIF system. Nat. Med. 9 (2003) 677-684
25. Royer C., Lachuer J., Crouzoulon G., Roux J., Peyronnet J., Mamet J., Pequignot J., and Dalmaz Y. Effects of gestational hypoxia on mRNA levels of Glut3 and Glut4 transporters, hypoxia inducible factor-1 and thyroid hormone receptors in developing rat brain. Brain Res. 856 (2000) 119-128
26. Ryan H.E., Lo J., and Johnson R.S. HIF-1 alpha is required for solid tumor formation and embryonic vascularization. EMBO J. 17 (1998) 3005-3015
27. Schipani E., Ryan H.E., Didrickson S., Kobayashi T., Knight M., and Johnson R.S. Hypoxia in cartilage: HIF-1alpha is essential for chondrocyte growth arrest and survival. Genes Dev. 15 (2001) 2865-2876
28. Schulte-Merker S. Looking at embryos. In: Nüsslein-Volhard C., and Dahm R. (Eds). Zebrafish (2002), Oxford University Press, New York 39-58
29. 2 homeostasis by hypoxia-inducible factor 1. Annu. Rev. Cell Dev. Biol. 15 (1999) 551-578
30. Semenza G.L. HIF-1 and mechanisms of hypoxia sensing. Curr. Opin. Cell Biol. 13 (2001) 167-171
31. Sipe C.W., Gruber E.J., and Saha M.S. Short upstream region drives dynamic expression of hypoxia-inducible factor 1alpha during Xenopus development. Dev. Dyn. 230 (2004) 229-238
32. Tian H., Hammer R.E., Matsumoto A.M., Russell D.W., and McKnight S.L. The hypoxia-responsive transcription factor EPAS1 is essential for catecholamine homeostasis and protection against heart failure during embryonic development. Genes Dev. 12 (1998) 3320-3324
33. Ton C., Stamatiou D., and Liew C.C. Gene expression profile of zebrafish exposed to hypoxia during development. Physiol. Genomics 13 (2003) 97-106
34. Wang G.L., and Semenza G.L. Purification and characterization of hypoxia-inducible factor 1. J. Biol. Chem. 270 (1995) 1230-1237
35. Westerfield M. The Zebrafish Book. fourth ed. (1995), University of Oregon Press, Eugene