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Volumn 73, Issue 4, 2006, Pages 949-959

Oil biodegradation by Bacillus strains isolated from the rock of an oil reservoir located in a deep-water production basin in Brazil

Author keywords

Bacillus strains; Biodegradation; Oil

Indexed keywords

GRAM-POSITIVE BACTERIA; OIL DEGRADATION; POLYMERASE CHAIN REACTION (PCR);

EID: 33751504127     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-006-0531-2     Document Type: Article
Times cited : (67)

References (39)
  • 1
    • 1842556108 scopus 로고    scopus 로고
    • Surfactant activity of a naphthalene degrading Bacillus pumilus strain isolated from oil sludge
    • Calvo C, Toledo FL, Gonzalez-Lopez J (2004) Surfactant activity of a naphthalene degrading Bacillus pumilus strain isolated from oil sludge. J Biotechnol 109:255-262
    • (2004) J Biotechnol , vol.109 , pp. 255-262
    • Calvo, C.1    Toledo, F.L.2    Gonzalez-Lopez, J.3
  • 2
    • 0038397514 scopus 로고    scopus 로고
    • Characterization of nitrogen-fixing Paenibacillus species by polymerase chain reaction-restriction fragment polymorphism analysis of part of genes encoding 16S rRNA and 23S rRNA and by multilocus enzyme electrophoresis
    • Coelho MMR, von der Weid I, Zahner V, Seldin L (2003) Characterization of nitrogen-fixing Paenibacillus species by polymerase chain reaction-restriction fragment polymorphism analysis of part of genes encoding 16S rRNA and 23S rRNA and by multilocus enzyme electrophoresis. FEMS Microbiol Lett 222:243-250
    • (2003) FEMS Microbiol Lett , vol.222 , pp. 243-250
    • Coelho, M.M.R.1    Von Der Weid, I.2    Zahner, V.3    Seldin, L.4
  • 3
    • 0021729228 scopus 로고
    • Biodegradation of crude oils in reservoirs
    • Brooks J, Welte DH (eds), Academic, London
    • Connan J (1984) Biodegradation of crude oils in reservoirs. In: Brooks J, Welte DH (eds), Advances in Petroleum Geochemistry 1. Academic, London, 299
    • (1984) Advances in Petroleum Geochemistry 1 , pp. 299
    • Connan, J.1
  • 4
    • 0037086196 scopus 로고    scopus 로고
    • Metabolic activity of subsurface life in deep-sea sediments
    • D'Hondt S, Rutherford S, Spivack AJ (2002) Metabolic activity of subsurface life in deep-sea sediments. Science 15: 2067-2070
    • (2002) Science , vol.15 , pp. 2067-2070
    • D'Hondt, S.1    Rutherford, S.2    Spivack, A.J.3
  • 5
    • 0032053780 scopus 로고    scopus 로고
    • A novel phenol hydroxylase and catechol 2,3-dioxygenase from the thermophilic Bacillus thermoleovorans strain A2: Nucleotide sequence and analysis of the genes
    • Duffner FM, Muller R (1998) A novel phenol hydroxylase and catechol 2,3-dioxygenase from the thermophilic Bacillus thermoleovorans strain A2: nucleotide sequence and analysis of the genes. FEMS Microbiol Lett 161:37-45
    • (1998) FEMS Microbiol Lett , vol.161 , pp. 37-45
    • Duffner, F.M.1    Muller, R.2
  • 6
    • 0015082432 scopus 로고
    • Response of spores and vegetative cells of Bacillus spp. in a hydrocarbon-water system
    • Felix JA, Cooney JJ (1971) Response of spores and vegetative cells of Bacillus spp. in a hydrocarbon-water system. J Appl Bacteriol 34:411-416
    • (1971) J Appl Bacteriol , vol.34 , pp. 411-416
    • Felix, J.A.1    Cooney, J.J.2
  • 7
    • 0002700639 scopus 로고
    • The genus Bacillus
    • Agricultural Research Service, U.S. Department of Agriculture, Washington, DC
    • Gordon RE, Haynes WC, Pang H-N (1973) The genus Bacillus. Agriculture handbook 427. Agricultural Research Service, U.S. Department of Agriculture, Washington, DC
    • (1973) Agriculture Handbook 427
    • Gordon, R.E.1    Haynes, W.C.2    Pang, H.-N.3
  • 8
    • 0034075457 scopus 로고    scopus 로고
    • Application of the partial 16S rDNA sequence as an index for rapid identification of species in the genus Bacillus
    • Goto K, Omura T, Hara Y, Sadaie Y (2000). Application of the partial 16S rDNA sequence as an index for rapid identification of species in the genus Bacillus. J Gen Appl Microbiol 46:1-8
    • (2000) J Gen Appl Microbiol , vol.46 , pp. 1-8
    • Goto, K.1    Omura, T.2    Hara, Y.3    Sadaie, Y.4
  • 9
    • 0028352410 scopus 로고
    • Catechol ring-cleavage in Pseudomonas cepacia: The simultaneous induction of ortho and metha pathways
    • Hamzah RY, Al-Baharna BS (1994) Catechol ring-cleavage in Pseudomonas cepacia: the simultaneous induction of ortho and metha pathways. Appl Microbiol Biotechnol 41:250-256
    • (1994) Appl Microbiol Biotechnol , vol.41 , pp. 250-256
    • Hamzah, R.Y.1    Al-Baharna, B.S.2
  • 10
    • 0344011969 scopus 로고    scopus 로고
    • Biological activity in the deep subsurface and the origin of heavy oil
    • Head IM, Jones DM, Larter SR (2003) Biological activity in the deep subsurface and the origin of heavy oil. Nature 426:344-352
    • (2003) Nature , vol.426 , pp. 344-352
    • Head, I.M.1    Jones, D.M.2    Larter, S.R.3
  • 12
    • 0026615575 scopus 로고
    • Biodegradation of crude oil by Bacillus strains 28A and 61B isolated from oil spilled soil
    • Ijah UJJ, Ukpe LI (1992) Biodegradation of crude oil by Bacillus strains 28A and 61B isolated from oil spilled soil. Waste Manage 12:55-60
    • (1992) Waste Manage , vol.12 , pp. 55-60
    • Ijah, U.J.J.1    Ukpe, L.I.2
  • 13
    • 0034579074 scopus 로고    scopus 로고
    • Kinetics of carbazole degradation by Pseudomonas putida in presence of sodium salicylate
    • Loh K-C, Yu Y-G (2000) Kinetics of carbazole degradation by Pseudomonas putida in presence of sodium salicylate. Water Res 34:4131-4138
    • (2000) Water Res , vol.34 , pp. 4131-4138
    • Loh, K.-C.1    Yu, Y.-G.2
  • 14
    • 0037007542 scopus 로고    scopus 로고
    • Ortho pathway of benzoate degradation in Pseudomonas putida: Induction of meta pathway at high substrate concentrations
    • Loh K-C, Chua SS (2002) Ortho pathway of benzoate degradation in Pseudomonas putida: induction of meta pathway at high substrate concentrations. Enzym Microb Technol 30:620-626
    • (2002) Enzym Microb Technol , vol.30 , pp. 620-626
    • Loh, K.-C.1    Chua, S.S.2
  • 15
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 16
    • 1142297445 scopus 로고    scopus 로고
    • gyrB as a phylogenetic discriminator for members of the Bacillus anthracis-cereus-thuringiensis group
    • La Duc MT, Satomib M, Agatac N, Venkateswarana K (2004) gyrB as a phylogenetic discriminator for members of the Bacillus anthracis-cereus- thuringiensis group. J Microbiol Methods 56:383-394
    • (2004) J Microbiol Methods , vol.56 , pp. 383-394
    • La Duc, M.T.1    Satomib, M.2    Agatac, N.3    Venkateswarana, K.4
  • 17
    • 3442891491 scopus 로고    scopus 로고
    • A survey of indigenous microbial hydrocarbon degradation genes in soils from Antarctica and Brazil
    • Luz AP, Pellizari VH, Whyte LG, Greer CW (2004) A survey of indigenous microbial hydrocarbon degradation genes in soils from Antarctica and Brazil. Can J Microbiol 50:323-333
    • (2004) Can J Microbiol , vol.50 , pp. 323-333
    • Luz, A.P.1    Pellizari, V.H.2    Whyte, L.G.3    Greer, C.W.4
  • 18
    • 0001823647 scopus 로고
    • Bacterial community fingerprinting of amplified 16S and 16-23S ribosomal DNA genes sequences and restriction endonuclease analysis (ARDRA)
    • Akkermans et al. (eds) Kluwer Academic, 3.3.2
    • Massol-Deya AA, Odelson DA, Hickey RP, Tiedje JM (1995) Bacterial community fingerprinting of amplified 16S and 16-23S ribosomal DNA genes sequences and restriction endonuclease analysis (ARDRA). In: Akkermans et al. (eds) Molecular microbial ecology manual. Kluwer Academic, 3.3.2., 1.
    • (1995) Molecular Microbial Ecology Manual , pp. 1
    • Massol-Deya, A.A.1    Odelson, D.A.2    Hickey, R.P.3    Tiedje, J.M.4
  • 19
    • 0036204947 scopus 로고    scopus 로고
    • Roles of Bacillus endospores in the environment
    • Nicholson WL (2002) Roles of Bacillus endospores in the environment. Cell Mol Life Sci 59:410-416
    • (2002) Cell Mol Life Sci , vol.59 , pp. 410-416
    • Nicholson, W.L.1
  • 20
    • 0141483403 scopus 로고    scopus 로고
    • Degradation of African locust bean oil by Bacillus subtilis and Bacillus pumilus isolated from soumbala, a fermented African locust bean condiment
    • Ouoba LI, Cantor MD, Diawara B, Traore AS, Jakobsen M (2003) Degradation of African locust bean oil by Bacillus subtilis and Bacillus pumilus isolated from soumbala, a fermented African locust bean condiment. J Appl Microbiol 95:868-873
    • (2003) J Appl Microbiol , vol.95 , pp. 868-873
    • Ouoba, L.I.1    Cantor, M.D.2    Diawara, B.3    Traore, A.S.4    Jakobsen, M.5
  • 21
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace NR (1997) A molecular view of microbial diversity and the biosphere. Science 276:734-740
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 23
    • 0347794946 scopus 로고    scopus 로고
    • Recent studies on bacterial populations and processes in subseafloor sediments: A review
    • Parkes RJ, Cragg BA, Wellesbury P (2000) Recent studies on bacterial populations and processes in subseafloor sediments: a review. Hydrogeol J 8:11-28
    • (2000) Hydrogeol J , vol.8 , pp. 11-28
    • Parkes, R.J.1    Cragg, B.A.2    Wellesbury, P.3
  • 25
    • 17144470783 scopus 로고    scopus 로고
    • The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: Perspectives and prospects
    • Röling WF, Head IM, Larler SR (2003) The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: perspectives and prospects. Res Microbiol 154:321-328
    • (2003) Res Microbiol , vol.154 , pp. 321-328
    • Röling, W.F.1    Head, I.M.2    Larler, S.R.3
  • 27
    • 0033458784 scopus 로고    scopus 로고
    • Design of PCR primers and gene probes for the general detection of bacterial populations capable of degrading aromatic compounds via catechol cleavage pathways
    • Sei K, Asano K-I, Tateishi N, Mori K, Ike M, Fujita M (1999) Design of PCR primers and gene probes for the general detection of bacterial populations capable of degrading aromatic compounds via catechol cleavage pathways. J Biosc Bioeng 88:542-550
    • (1999) J Biosc Bioeng , vol.88 , pp. 542-550
    • Sei, K.1    Asano, K.-I.2    Tateishi, N.3    Mori, K.4    Ike, M.5    Fujita, M.6
  • 28
    • 0021928234 scopus 로고
    • DNA homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans and other nitrogen fixing Bacillus strains
    • Seldin L, Dubnau D (1985) DNA homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans and other nitrogen fixing Bacillus strains. Int J Syst Bacteriol 35:151-154
    • (1985) Int J Syst Bacteriol , vol.35 , pp. 151-154
    • Seldin, L.1    Dubnau, D.2
  • 29
    • 0001451022 scopus 로고
    • Bacillus nitrogen fixers from Brazilian soils
    • Seldin L, van Elsas JD, Penido ECG (1983) Bacillus nitrogen fixers from Brazilian soils. Plant Soil 70:243-255
    • (1983) Plant Soil , vol.70 , pp. 243-255
    • Seldin, L.1    Van Elsas, J.D.2    Penido, E.C.G.3
  • 30
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846-849
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 31
    • 11844306628 scopus 로고    scopus 로고
    • Stable carbon and hydrogen isotopic fraction of individual n-alkanes accompanying biodegradation: Evidence from group of progressively biodegraded oils
    • Sun Y, Chen Z, Xu S, Cai P (2005) Stable carbon and hydrogen isotopic fraction of individual n-alkanes accompanying biodegradation: evidence from group of progressively biodegraded oils. Org Geochem 36:225-238
    • (2005) Org Geochem , vol.36 , pp. 225-238
    • Sun, Y.1    Chen, Z.2    Xu, S.3    Cai, P.4
  • 32
    • 23944522766 scopus 로고    scopus 로고
    • The deep subsurface biosphere is alive and well
    • Teske AP (2005) The deep subsurface biosphere is alive and well. Trends Microbiol 13:402-404
    • (2005) Trends Microbiol , vol.13 , pp. 402-404
    • Teske, A.P.1
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 37
    • 29044433538 scopus 로고    scopus 로고
    • Development of a group-specific PCR combined with ARDRA for the identification of Bacillus species of environmental significance
    • Wu XY, Walker MJ, Hornitzky M, Chin J (2006) Development of a group-specific PCR combined with ARDRA for the identification of Bacillus species of environmental significance. J Microbiol Methods 64:107-119
    • (2006) J Microbiol Methods , vol.64 , pp. 107-119
    • Wu, X.Y.1    Walker, M.J.2    Hornitzky, M.3    Chin, J.4
  • 38
    • 0038518210 scopus 로고    scopus 로고
    • Phylogenetic relationships between Bacillus species and related genera inferred from comparison of 39 end 16S rDNA and 59 end 16S-23S ITS nucleotide sequences
    • Xu D, Côté J-C (2003) Phylogenetic relationships between Bacillus species and related genera inferred from comparison of 39 end 16S rDNA and 59 end 16S-23S ITS nucleotide sequences. Int J Syst Evol Microbiol 53:695-704
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 695-704
    • Xu, D.1    Côté, J.-C.2
  • 39
    • 0037267668 scopus 로고    scopus 로고
    • Importance of Gram-positive naphthalene-degrading bacteria in oil-contaminated tropical marine sediments
    • Zhuang WO, Tay JH, Maszenan AM, Krumholz LR, Tay ST (2003) Importance of Gram-positive naphthalene-degrading bacteria in oil-contaminated tropical marine sediments. Lett Appl Microbiol 36:251-257
    • (2003) Lett Appl Microbiol , vol.36 , pp. 251-257
    • Zhuang, W.O.1    Tay, J.H.2    Maszenan, A.M.3    Krumholz, L.R.4    Tay, S.T.5


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