메뉴 건너뛰기




Volumn 66, Issue 21, 2006, Pages 10621-10629

Examination of a CpG island methylator phenotype and implications of methylation profiles in solid tumors

Author keywords

[No Author keywords available]

Indexed keywords

CARCINOGEN;

EID: 33751275546     PISSN: 00085472     EISSN: None     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-06-1687     Document Type: Article
Times cited : (89)

References (43)
  • 1
    • 29244469466 scopus 로고    scopus 로고
    • The epigenetic progenitor origin of human cancer
    • Feinberg AP, Ohlsson R, Henikoff S. The epigenetic progenitor origin of human cancer. Nat Rev Genet 2006;7:21-33.
    • (2006) Nat Rev Genet , vol.7 , pp. 21-33
    • Feinberg, A.P.1    Ohlsson, R.2    Henikoff, S.3
  • 3
    • 0032543784 scopus 로고    scopus 로고
    • Concordant methylation of the ER and N33 genes in glioblastoma multiforme
    • Li Q, Jedlicka A, Ahuja N, et al. Concordant methylation of the ER and N33 genes in glioblastoma multiforme. Oncogene 1998;16:3197-202.
    • (1998) Oncogene , vol.16 , pp. 3197-3202
    • Li, Q.1    Jedlicka, A.2    Ahuja, N.3
  • 4
    • 13444270332 scopus 로고    scopus 로고
    • CpG island methylator phenotype is a strong determinant of poor prognosis in neuroblastomas
    • Abe M, Ohira M, Kaneda A, et al. CpG island methylator phenotype is a strong determinant of poor prognosis in neuroblastomas. Cancer Res 2005;65:828-34.
    • (2005) Cancer Res , vol.65 , pp. 828-834
    • Abe, M.1    Ohira, M.2    Kaneda, A.3
  • 5
    • 0033229890 scopus 로고    scopus 로고
    • Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype
    • Toyota M, Ahuja N, Suzuki H, et al. Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype. Cancer Res 1999;59:5438-42.
    • (1999) Cancer Res , vol.59 , pp. 5438-5442
    • Toyota, M.1    Ahuja, N.2    Suzuki, H.3
  • 6
    • 0037094189 scopus 로고    scopus 로고
    • DNA methylation and environmental exposures in human hepatocellular carcinoma
    • Shen L, Ahuja N, Shen Y, et al. DNA methylation and environmental exposures in human hepatocellular carcinoma. J Natl Cancer Inst 2002;94:755-61.
    • (2002) J Natl Cancer Inst , vol.94 , pp. 755-761
    • Shen, L.1    Ahuja, N.2    Shen, Y.3
  • 7
    • 27244438584 scopus 로고    scopus 로고
    • Lack of CpG island methylator phenotype defines a clinical subtype of T-cell acute lymphoblastic leukemia associated with good prognosis
    • Roman-Gomez J, Jimenez-Velasco A, Agirre X, Prosper F, Heiniger A, Torres A. Lack of CpG island methylator phenotype defines a clinical subtype of T-cell acute lymphoblastic leukemia associated with good prognosis. J Clin Oncol 2005;23:7043-9.
    • (2005) J Clin Oncol , vol.23 , pp. 7043-7049
    • Roman-Gomez, J.1    Jimenez-Velasco, A.2    Agirre, X.3    Prosper, F.4    Heiniger, A.5    Torres, A.6
  • 9
    • 0035099160 scopus 로고    scopus 로고
    • Primary ovarian carcinomas display multiple methylator phenotypes involving known tumor suppressor genes
    • Strathdee G, Appleton K, Illand M, et al. Primary ovarian carcinomas display multiple methylator phenotypes involving known tumor suppressor genes. Am J Pathol 2001;158:1121-7.
    • (2001) Am J Pathol , vol.158 , pp. 1121-1127
    • Strathdee, G.1    Appleton, K.2    Illand, M.3
  • 10
    • 10344260184 scopus 로고    scopus 로고
    • CpG island methylator phenotype in cancer
    • Issa JP. CpG island methylator phenotype in cancer. Nat Rev Cancer 2004;4:988-93.
    • (2004) Nat Rev Cancer , vol.4 , pp. 988-993
    • Issa, J.P.1
  • 11
    • 20844453068 scopus 로고    scopus 로고
    • Colorectal cancer "methylator phenotype": Fact or artifact?
    • Anacleto C, Leopoldino AM, Rossi B, et al. Colorectal cancer "methylator phenotype": fact or artifact? Neoplasia 2005;7:331-5.
    • (2005) Neoplasia , vol.7 , pp. 331-335
    • Anacleto, C.1    Leopoldino, A.M.2    Rossi, B.3
  • 13
    • 23844496681 scopus 로고    scopus 로고
    • Epigenetic inactivation of SFRP genes and TP53 alteration act jointly as markers of invasive bladder cancer
    • Marsit CJ, Karagas MR, Andrew A, et al. Epigenetic inactivation of SFRP genes and TP53 alteration act jointly as markers of invasive bladder cancer. Cancer Res 2005;65:7081-5.
    • (2005) Cancer Res , vol.65 , pp. 7081-7085
    • Marsit, C.J.1    Karagas, M.R.2    Andrew, A.3
  • 14
    • 33644502525 scopus 로고    scopus 로고
    • Homozygous deletion of p16(INK4a) and tobacco carcinogen exposure in non-small cell lung cancer
    • Kraunz KS, Nelson HH, Lemos M, Godleski JJ, Wiencke JK, Kelsey KT. Homozygous deletion of p16(INK4a) and tobacco carcinogen exposure in non-small cell lung cancer. Int J Cancer 2006;118:1364-9.
    • (2006) Int J Cancer , vol.118 , pp. 1364-1369
    • Kraunz, K.S.1    Nelson, H.H.2    Lemos, M.3    Godleski, J.J.4    Wiencke, J.K.5    Kelsey, K.T.6
  • 17
    • 18444408077 scopus 로고    scopus 로고
    • K-ras mutations and RASSF1A promoter methylation in colorectal cancer
    • van Engeland M, Roemen GM, Brink M, et al. K-ras mutations and RASSF1A promoter methylation in colorectal cancer. Oncogene 2002;21:3792-5.
    • (2002) Oncogene , vol.21 , pp. 3792-3795
    • Van Engeland, M.1    Roemen, G.M.2    Brink, M.3
  • 18
    • 0034772312 scopus 로고    scopus 로고
    • Aberrant methylation of the adenomatous polyposis coli (APC) gene promoter 1A in breast and lung carcinomas
    • Virmani AK, Rathi A, Sathyanarayana UG, et al. Aberrant methylation of the adenomatous polyposis coli (APC) gene promoter 1A in breast and lung carcinomas. Clin Cancer Res 2001;7:1998-2004.
    • (2001) Clin Cancer Res , vol.7 , pp. 1998-2004
    • Virmani, A.K.1    Rathi, A.2    Sathyanarayana, U.G.3
  • 19
    • 0037817414 scopus 로고    scopus 로고
    • Aberrant methylation of TMS1 in small cell, non small cell lung cancer and breast cancer
    • Virmani A, Rathi A, Sugio K, et al. Aberrant methylation of TMS1 in small cell, non small cell lung cancer and breast cancer. Int J Cancer 2003;106:198-204.
    • (2003) Int J Cancer , vol.106 , pp. 198-204
    • Virmani, A.1    Rathi, A.2    Sugio, K.3
  • 20
    • 10744226784 scopus 로고    scopus 로고
    • Molecular detection of noninvasive and invasive bladder tumor tissues and exfoliated cells by aberrant promoter methylation of laminin-5 encoding genes
    • Sathyanarayana UG, Maruyama R, Padar A, et al. Molecular detection of noninvasive and invasive bladder tumor tissues and exfoliated cells by aberrant promoter methylation of laminin-5 encoding genes. Cancer Res 2004;64:1425-30.
    • (2004) Cancer Res , vol.64 , pp. 1425-1430
    • Sathyanarayana, U.G.1    Maruyama, R.2    Padar, A.3
  • 21
    • 12144291274 scopus 로고    scopus 로고
    • Epigenetic inactivation of SFRP genes allows constitutive WNT signaling in colorectal cancer
    • Suzuki H, Watkins DN, Jair KW, et al. Epigenetic inactivation of SFRP genes allows constitutive WNT signaling in colorectal cancer. Nat Genet 2004;36:417-22.
    • (2004) Nat Genet , vol.36 , pp. 417-422
    • Suzuki, H.1    Watkins, D.N.2    Jair, K.W.3
  • 23
    • 0035423037 scopus 로고    scopus 로고
    • Aberrant methylation and simian virus 40 tag sequences in malignant mesothelioma
    • Toyooka S, Pass HI, Shivapurkar N, et al. Aberrant methylation and simian virus 40 tag sequences in malignant mesothelioma. Cancer Res 2001;61:5727-30.
    • (2001) Cancer Res , vol.61 , pp. 5727-5730
    • Toyooka, S.1    Pass, H.I.2    Shivapurkar, N.3
  • 25
    • 0036735305 scopus 로고    scopus 로고
    • Aberrant CpG island methylation of multiple genes in intrahepatic cholangiocarcinoma
    • Lee S, Kim WH, Jung HY, Yang MH, Kang GH. Aberrant CpG island methylation of multiple genes in intrahepatic cholangiocarcinoma. Am J Pathol 2002;161:1015-22.
    • (2002) Am J Pathol , vol.161 , pp. 1015-1022
    • Lee, S.1    Kim, W.H.2    Jung, H.Y.3    Yang, M.H.4    Kang, G.H.5
  • 26
    • 0034654669 scopus 로고    scopus 로고
    • MethyLight: A high-throughput assay to measure DNA methylation
    • Eads CA, Danenberg KD, Kawakami K, et al. MethyLight: a high-throughput assay to measure DNA methylation. Nucleic Acids Res 2000;28:E32.
    • (2000) Nucleic Acids Res , vol.28
    • Eads, C.A.1    Danenberg, K.D.2    Kawakami, K.3
  • 27
    • 33751290204 scopus 로고    scopus 로고
    • Sun exposure related methylation in malignant and non-malignant skin lesions
    • Feb 20
    • Sathyanarayana UG, Moore AY, Li L, et al. Sun exposure related methylation in malignant and non-malignant skin lesions. Cancer Lett. Epub 2006 Feb 20.
    • (2006) Cancer Lett. Epub
    • Sathyanarayana, U.G.1    Moore, A.Y.2    Li, L.3
  • 31
    • 0001918459 scopus 로고
    • Semiparametric estimation in the Rasch model and related exponential response models, including simple latent class model for item analysis
    • Lindsay B, Clogg CC, Grego J. Semiparametric estimation in the Rasch model and related exponential response models, including simple latent class model for item analysis. J Am Stat Assoc 1991;86:96-107.
    • (1991) J Am Stat Assoc , vol.86 , pp. 96-107
    • Lindsay, B.1    Clogg, C.C.2    Grego, J.3
  • 34
    • 33751270853 scopus 로고    scopus 로고
    • 7.1 Nominal responses: Baseline-category logit models
    • Hoboken (NJ): John Wiley & Sons
    • Agresti A. 7.1 Nominal responses: baseline-category logit models. In: Categorical data analysis. 2nd ed. Hoboken (NJ): John Wiley & Sons; 2002. p. 267-72.
    • (2002) Categorical Data Analysis. 2nd Ed. , pp. 267-272
    • Agresti, A.1
  • 36
    • 33751261808 scopus 로고    scopus 로고
    • Feature-specific penalized latent class analysis for genomic data
    • In press
    • Houseman FA Coull BA, Betensky RA. Feature-specific penalized latent class analysis for genomic data. Biometrics. In press 2006.
    • (2006) Biometrics
    • Houseman, F.A.1    Coull, B.A.2    Betensky, R.A.3
  • 37
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike H. A new look at the statistical model identification. IEEE Trans Automat Contr AC 1974;18: 716-23.
    • (1974) IEEE Trans Automat Contr AC , vol.18 , pp. 716-723
    • Akaike, H.1
  • 39
    • 29744460315 scopus 로고    scopus 로고
    • Carcinogen exposure and gene promoter hypermethylation in bladder cancer
    • Marsit CJ, Karagas MR, Danaee H, et al. Carcinogen exposure and gene promoter hypermethylation in bladder cancer. Carcinogenesis 2006;27:112-6.
    • (2006) Carcinogenesis , vol.27 , pp. 112-116
    • Marsit, C.J.1    Karagas, M.R.2    Danaee, H.3
  • 40
    • 32944468706 scopus 로고    scopus 로고
    • Mutational and epigenetic evidence for independent pathways for lung adenocarcinomas arising in smokers and never smokers
    • Toyooka S, Tokumo M, Shigematsu H, et al. Mutational and epigenetic evidence for independent pathways for lung adenocarcinomas arising in smokers and never smokers. Cancer Res 2006;66:1371-5.
    • (2006) Cancer Res , vol.66 , pp. 1371-1375
    • Toyooka, S.1    Tokumo, M.2    Shigematsu, H.3
  • 41
    • 0032739329 scopus 로고    scopus 로고
    • CpG island methylator phenotypes in aging and cancer
    • Toyota M, Issa JP. CpG island methylator phenotypes in aging and cancer. Semin Cancer Biol 1999;9:349-57.
    • (1999) Semin Cancer Biol , vol.9 , pp. 349-357
    • Toyota, M.1    Issa, J.P.2
  • 42
    • 0035870282 scopus 로고    scopus 로고
    • p16(INK4a) and histology-specific methylation of CpG islands by exposure to tobacco smoke in non-small cell lung cancer
    • Kim DH, Nelson HH, Wiencke JK, et al. p16(INK4a) and histology-specific methylation of CpG islands by exposure to tobacco smoke in non-small cell lung cancer. Cancer Res 2001;61:3419-24.
    • (2001) Cancer Res , vol.61 , pp. 3419-3424
    • Kim, D.H.1    Nelson, H.H.2    Wiencke, J.K.3
  • 43
    • 33747512086 scopus 로고    scopus 로고
    • Dietary folate is associated with p16ink4a methylation in head and neck squamous cell carcinoma
    • Kraunz KS, Hsiung D, McClean MD, et al. Dietary folate is associated with p16ink4a methylation in head and neck squamous cell carcinoma. Int J Cancer 2006;119:1553-7.
    • (2006) Int J Cancer , vol.119 , pp. 1553-1557
    • Kraunz, K.S.1    Hsiung, D.2    McClean, M.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.