-
1
-
-
0036889705
-
Phylogenetic characterization of the bacterial assemblage associated with mucous secretions of the hydrothermal vent polychaete Paralvinella palmiformis
-
Alain K, Olagnon M, Desbruyères D, Pagé A, Barbier G, Juniper SK, Quérellou J & Cambon-Bonavita MA (2002) Phylogenetic characterization of the bacterial assemblage associated with mucous secretions of the hydrothermal vent polychaete Paralvinella palmiformis. FEMS Microbiol Ecol 42: 463-476.
-
(2002)
FEMS Microbiol Ecol
, vol.42
, pp. 463-476
-
-
Alain, K.1
Olagnon, M.2
Desbruyères, D.3
Pagé, A.4
Barbier, G.5
Juniper, S.K.6
Quérellou, J.7
Cambon-Bonavita, M.A.8
-
2
-
-
1342268699
-
Early steps in microbial colonization processes at deep-sea hydrothermal vents
-
Alain K, Zbinden M, Le Bris N, Lesongeur F, Querellou J, Gaill F & Cambon-Bonavita MA (2004) Early steps in microbial colonization processes at deep-sea hydrothermal vents. Environ Microbiol 6: 227-241.
-
(2004)
Environ Microbiol
, vol.6
, pp. 227-241
-
-
Alain, K.1
Zbinden, M.2
Le Bris, N.3
Lesongeur, F.4
Querellou, J.5
Gaill, F.6
Cambon-Bonavita, M.A.7
-
3
-
-
0029781935
-
The oligonucleotide probe database
-
Alm EW, Oerther DB, Larsen N, Stahl DA & Raskin L (1996) The oligonucleotide probe database. Appl Environ Microbiol 62: 3557-3559.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 3557-3559
-
-
Alm, E.W.1
Oerther, D.B.2
Larsen, N.3
Stahl, D.A.4
Raskin, L.5
-
4
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann RI, Binder BJ, Olson RJ, Chisholm SW, Devereux R & Stahl DA (1990) Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56: 1919-1925.
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 1919-1925
-
-
Amann, R.I.1
Binder, B.J.2
Olson, R.J.3
Chisholm, S.W.4
Devereux, R.5
Stahl, D.A.6
-
5
-
-
0141816888
-
Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete
-
Campbell BJ, Stein JL & Cary SC (2003) Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete. Appl Environ Microbiol 69: 5070-5078.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 5070-5078
-
-
Campbell, B.J.1
Stein, J.L.2
Cary, S.C.3
-
6
-
-
8144229173
-
Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents
-
Campbell BJ & Cary SC (2004) Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents. Appl Environ Microbiol 70: 6282-6289.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 6282-6289
-
-
Campbell, B.J.1
Cary, S.C.2
-
7
-
-
0031034880
-
Molecular identification and localization of filamentous symbiotic bacteria associated with the hydrothermal vent annelid Alvinella pompejana
-
Cary SC, Cottrell MT, Stein JL, Camacho F & Desbruyeres D (1997) Molecular identification and localization of filamentous symbiotic bacteria associated with the hydrothermal vent annelid Alvinella pompejana. Appl Environ Microbiol 63: 1124-1130.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 1124-1130
-
-
Cary, S.C.1
Cottrell, M.T.2
Stein, J.L.3
Camacho, F.4
Desbruyeres, D.5
-
9
-
-
0035909781
-
ε-Proteobacterial diversity from a deep-sea hydrothermal vent on the mid-Atlantic ridge
-
Corre E, Reysenbach AL & Prieur D (2001) ε-Proteobacterial diversity from a deep-sea hydrothermal vent on the mid-Atlantic ridge. FEMS Microbiol Lett 205: 329-335.
-
(2001)
FEMS Microbiol Lett
, vol.205
, pp. 329-335
-
-
Corre, E.1
Reysenbach, A.L.2
Prieur, D.3
-
10
-
-
19544375446
-
Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter
-
Donachie SP, Bowman JP, On SL & Alam M (2005) Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter. Int J Syst Evol Microbiol 55: 1271-1277.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1271-1277
-
-
Donachie, S.P.1
Bowman, J.P.2
On, S.L.3
Alam, M.4
-
12
-
-
0028827927
-
Initial results of the rapid response to the 1993 CoAxial event: Relationships between hydrothermal and volcanic processes
-
Embley RW Jr, Chadwick WW, Jonasson IR, Butterfield DA & Baker ET (1995) Initial results of the rapid response to the 1993 CoAxial event: relationships between hydrothermal and volcanic processes. Geophys Res Lett 22: 143-146.
-
(1995)
Geophys Res Lett
, vol.22
, pp. 143-146
-
-
Embley Jr., R.W.1
Chadwick, W.W.2
Jonasson, I.R.3
Butterfield, D.A.4
Baker, E.T.5
-
13
-
-
0034631650
-
Recent eruptions on the CoAxial segment of the Juan de Fuca ridge: Implications for mid-ocean ridge accretion processes
-
Embley RW, Chadwick WW Jr, Perfit MR, Smith MC & Delaney JR (2000) Recent eruptions on the CoAxial segment of the Juan de Fuca ridge: implications for mid-ocean ridge accretion processes. J Geophys Res 105: 16501-16526.
-
(2000)
J Geophys Res
, vol.105
, pp. 16501-16526
-
-
Embley, R.W.1
Chadwick Jr., W.W.2
Perfit, M.R.3
Smith, M.C.4
Delaney, J.R.5
-
14
-
-
0141704589
-
Filamentous 'Epsilonproteobacteria' dominate microbial mats from sulfidic cave springs
-
Engel AS, Lee N, Porter ML, Stern LA, Bennett PC & Wagner M (2003) Filamentous 'Epsilonproteobacteria' dominate microbial mats from sulfidic cave springs. Appl Environ Microbiol 69: 5503-5511.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 5503-5511
-
-
Engel, A.S.1
Lee, N.2
Porter, M.L.3
Stern, L.A.4
Bennett, P.C.5
Wagner, M.6
-
15
-
-
0029032318
-
Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species
-
Farrelly V, Rainey FA & Stackebrandt E (1995) Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl Environ Microbiol 61: 2798-2801.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2798-2801
-
-
Farrelly, V.1
Rainey, F.A.2
Stackebrandt, E.3
-
16
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsentein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 30: 783-791.
-
(1985)
Evolution
, vol.30
, pp. 783-791
-
-
Felsentein, J.1
-
17
-
-
0031692488
-
Variations of bacterial populations in uman feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes
-
Franks AH, Harmsen HJM, Raangs GC, Jansen GJ, Schut F & Welling GW (1998) Variations of bacterial populations in uman feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes. Appl Environ Microbiol 64: 3336-3345.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3336-3345
-
-
Franks, A.H.1
Harmsen, H.J.M.2
Raangs, G.C.3
Jansen, G.J.4
Schut, F.5
Welling, G.W.6
-
18
-
-
0030464460
-
SEAVIEW and PHYLO_WIN: Two graphic tools for sequence alignment and molecular phylogeny
-
Galtier N, Gouy M & Gautier C (1996) SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12: 543-548.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 543-548
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
19
-
-
0034041256
-
Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfide-oxidizing bacteria isolated from oil field brine
-
Gevertz D, Telang AJ, Voordouw G & Jenneman GE (2000) Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfide-oxidizing bacteria isolated from oil field brine. Appl Environ Microbiol 66: 2491-2501.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 2491-2501
-
-
Gevertz, D.1
Telang, A.J.2
Voordouw, G.3
Jenneman, G.E.4
-
20
-
-
2442680697
-
Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian ocean
-
Goffredi SK, Waren A, Orphan VJ, Van Dover CL & Vrijenhoek RC (2004) Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian ocean. Appl Environ Microbiol 70: 3082-3090.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3082-3090
-
-
Goffredi, S.K.1
Waren, A.2
Orphan, V.J.3
Van Dover, C.L.4
Vrijenhoek, R.C.5
-
21
-
-
0028819301
-
Eubacterial PCR: Contaminating DNA in primer preparations and its elimination by UV light
-
Goldenberger D & Altwegg M (1995) Eubacterial PCR: contaminating DNA in primer preparations and its elimination by UV light. J Microbiol Methods 21: 27-32.
-
(1995)
J Microbiol Methods
, vol.21
, pp. 27-32
-
-
Goldenberger, D.1
Altwegg, M.2
-
22
-
-
0029035937
-
Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana
-
Haddad A, Camacho F, Durand P & Cary SC (1995) Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana. Appl Environ Microbiol 61: 1679-1687.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1679-1687
-
-
Haddad, A.1
Camacho, F.2
Durand, P.3
Cary, S.C.4
-
23
-
-
0030788862
-
Distribution of microorganisms in deep-sea hydrothermal vent chimneys investigated by whole-cell hybridization and enrichment culture of thermophilic subpopulations
-
Harmsen H, Prieur D & Jeanthon C (1997a) Distribution of microorganisms in deep-sea hydrothermal vent chimneys investigated by whole-cell hybridization and enrichment culture of thermophilic subpopulations. Appl Environ Microbiol 63: 2876-2883.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2876-2883
-
-
Harmsen, H.1
Prieur, D.2
Jeanthon, C.3
-
24
-
-
0030863651
-
Group-specific 16S rRNA-targeted oligonucleotide probes to identify thermophilic bacteria in marine hydrothermal vents
-
Harmsen HJM, Prieur D & Jeanthon C (1997b) Group-specific 16S rRNA-targeted oligonucleotide probes to identify thermophilic bacteria in marine hydrothermal vents. Appl Environ Microbiol 63: 4061-4068.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4061-4068
-
-
Harmsen, H.J.M.1
Prieur, D.2
Jeanthon, C.3
-
25
-
-
0027836117
-
Volcanic eruption of the mid-ocean ridge along the East Pacific Rise crest at 9 degree 45-52'N: Direct submersible observations of seafloor phenomena associated with an eruption event in April, 1991
-
Haymon RM, Fornari DJ, Von Damm KL et al. (1993) Volcanic eruption of the mid-ocean ridge along the East Pacific Rise crest at 9 degree 45-52'N: direct submersible observations of seafloor phenomena associated with an eruption event in April, 1991. Earth Planet Sci Lett 119: 85-101.
-
(1993)
Earth Planet Sci Lett
, vol.119
, pp. 85-101
-
-
Haymon, R.M.1
Fornari, D.J.2
Von Damm, K.L.3
-
27
-
-
0022268112
-
Volcanism and metallogenesis of axial and off-axial structures on the East Pacific Rise near 13°N
-
Hekinian R & Fouquet Y (1985) Volcanism and metallogenesis of axial and off-axial structures on the East Pacific Rise near 13°N. Econ Geol 80: 221-249.
-
(1985)
Econ Geol
, vol.80
, pp. 221-249
-
-
Hekinian, R.1
Fouquet, Y.2
-
28
-
-
16844384716
-
Arcobacter cibarius sp. nov., isolated from broiler carcasses
-
Houf K, On SL, Coenye T, Mast J, Van Hoof J & Vandamme P (2005) Arcobacter cibarius sp. nov., isolated from broiler carcasses. Int J Syst Evol Microbiol 55: 713-717.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 713-717
-
-
Houf, K.1
On, S.L.2
Coenye, T.3
Mast, J.4
Van Hoof, J.5
Vandamme, P.6
-
29
-
-
0036211208
-
Temporal changes in archaeal diversity and chemistry in a Mid-Ocean Ridge subseafloor habitat
-
Huber JA, Butterfield DA & Baross JA (2002) Temporal changes in archaeal diversity and chemistry in a Mid-Ocean Ridge subseafloor habitat. Appl Environ Microbiol 68: 1585-1594.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 1585-1594
-
-
Huber, J.A.1
Butterfield, D.A.2
Baross, J.A.3
-
30
-
-
0037375056
-
Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption
-
Huber JA, Butterfield DA & Baross JA (2003) Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption. FEMS Microbiol Ecol 43: 393-409.
-
(2003)
FEMS Microbiol Ecol
, vol.43
, pp. 393-409
-
-
Huber, J.A.1
Butterfield, D.A.2
Baross, J.A.3
-
32
-
-
0345328152
-
Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing ε-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa trough
-
Inagaki F, Takai K, Kobayashi H, Nealson KH & Horikoshi K (2003) Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing ε-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa trough. Int J Syst Evol Microbiol 53: 1801-1805.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1801-1805
-
-
Inagaki, F.1
Takai, K.2
Kobayashi, H.3
Nealson, K.H.4
Horikoshi, K.5
-
33
-
-
5444247841
-
Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the epsilon-Proteobacteria isolated from Okinawa Trough hydrothermal sediments
-
Inagaki F, Takai K, Nealson KH & Horikoshi K (2004) Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the epsilon-Proteobacteria isolated from Okinawa Trough hydrothermal sediments. Int J Syst Evol Microbiol 54: 1477-1482.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1477-1482
-
-
Inagaki, F.1
Takai, K.2
Nealson, K.H.3
Horikoshi, K.4
-
34
-
-
0000738478
-
Morphological survey of microbial mats near deep-sea thermal vents
-
Jannasch HW & Wirsen CO (1981) Morphological survey of microbial mats near deep-sea thermal vents. Appl Environ Microbiol 41: 528-538.
-
(1981)
Appl Environ Microbiol
, vol.41
, pp. 528-538
-
-
Jannasch, H.W.1
Wirsen, C.O.2
-
35
-
-
0024856530
-
Massive natural occurence of unusually large bacteria (Beggiatoa sp.) at a hydrothermal deep-sea vent
-
Jannasch HW, Nelson KE & Wirsen CO (1989) Massive natural occurence of unusually large bacteria (Beggiatoa sp.) at a hydrothermal deep-sea vent. Nature 342: 834-836.
-
(1989)
Nature
, vol.342
, pp. 834-836
-
-
Jannasch, H.W.1
Nelson, K.E.2
Wirsen, C.O.3
-
36
-
-
0034021902
-
Molecular ecology of hydrothermal vent microbial communities
-
Jeanthon C (2000) Molecular ecology of hydrothermal vent microbial communities. Antonie Van Leeuwenhoek 77: 117-133.
-
(2000)
Antonie Van Leeuwenhoek
, vol.77
, pp. 117-133
-
-
Jeanthon, C.1
-
37
-
-
0021070752
-
Methanococcus jannaschii, sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent
-
Jones WJ, Leigh JA, Mayer F, Woese CR &Wolfe RS (1983) Methanococcus jannaschii, sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent. Arch Microbiol 136: 254-261.
-
(1983)
Arch Microbiol
, vol.136
, pp. 254-261
-
-
Jones, W.J.1
Leigh, J.A.2
Mayer, F.3
Woese, C.R.4
Wolfe, R.S.5
-
38
-
-
0037052320
-
Isolating 'uncultivable' microorganisms in pure culture in a simulated natural environment
-
Kaeberlein T, Lewis K & Epstein SS (2002) Isolating 'uncultivable' microorganisms in pure culture in a simulated natural environment. Science 296: 1127-1129.
-
(2002)
Science
, vol.296
, pp. 1127-1129
-
-
Kaeberlein, T.1
Lewis, K.2
Epstein, S.S.3
-
39
-
-
0002896595
-
Ecology of free-living, hydrothermal vent microbial communities
-
(Karl DM, ed), CRC Press Inc, Boca Raton
-
Karl DM (1995) Ecology of free-living, hydrothermal vent microbial communities. The Microbiology of Deep-Sea Hydrothermal Vents (Karl DM, ed), pp. 35-124. CRC Press Inc, Boca Raton.
-
(1995)
The Microbiology of Deep-Sea Hydrothermal Vents
, pp. 35-124
-
-
Karl, D.M.1
-
40
-
-
0019296687
-
A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M (1980) A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
41
-
-
1342344413
-
Biogeochemical interactions in extreme environmental conditions: An integrated study (PHARE 2002/EPR 13°N)
-
Le Bris N, Gaill F, Alain K et al. (2002) Biogeochemical interactions in extreme environmental conditions: an integrated study (PHARE 2002/EPR 13°N). InterRidge News 11: 20-23.
-
(2002)
InterRidge News
, vol.11
, pp. 20-23
-
-
Le Bris, N.1
Gaill, F.2
Alain, K.3
-
42
-
-
0035054356
-
Expansion of the geographic distribution of a novel lineage of ε-Proteobacteria to a hydrothermal vent site on the Southern East Pacific Rise
-
Longnecker K & Reysenbachach AL (2001) Expansion of the geographic distribution of a novel lineage of ε-Proteobacteria to a hydrothermal vent site on the Southern East Pacific Rise. FEMS Microbiol Ecol 35: 287-293.
-
(2001)
FEMS Microbiol Ecol
, vol.35
, pp. 287-293
-
-
Longnecker, K.1
Reysenbachach, A.L.2
-
43
-
-
0036053784
-
Wide bacterial diversity associated with tubes of the vent worm Riftia pachyptila
-
Lopez-Garcia P, Gaill F & Moreira D (2002) Wide bacterial diversity associated with tubes of the vent worm Riftia pachyptila. Environ Microbiol 4: 204-215.
-
(2002)
Environ Microbiol
, vol.4
, pp. 204-215
-
-
Lopez-Garcia, P.1
Gaill, F.2
Moreira, D.3
-
44
-
-
0141788252
-
Bacterial diversity in hydrothermal sediment and epsilonproteobacterial dominance in experimental microcolonizers at the Mid-Atlantic Ridge
-
Lopez-Garcia P, Duperron S, Philippot P, Foriel J, Susini J & Moreira D (2003) Bacterial diversity in hydrothermal sediment and epsilonproteobacterial dominance in experimental microcolonizers at the Mid-Atlantic Ridge. Environ Microbiol 5: 961-976.
-
(2003)
Environ Microbiol
, vol.5
, pp. 961-976
-
-
Lopez-Garcia, P.1
Duperron, S.2
Philippot, P.3
Foriel, J.4
Susini, J.5
Moreira, D.6
-
45
-
-
0033637595
-
Arcobacter butzleri, A. skirrowii and A. cryaerophilus -potential emerging human pathogens
-
Mansfield LP & Forsythe SJ (2000) Arcobacter butzleri, A. skirrowii and A. cryaerophilus -potential emerging human pathogens. Rev Med Microbiol 11: 161-170.
-
(2000)
Rev Med Microbiol
, vol.11
, pp. 161-170
-
-
Mansfield, L.P.1
Forsythe, S.J.2
-
46
-
-
0030301397
-
Numerical taxonomic study of thermophilic Bacillus isolated from three geographically separated deep-sea hydrothermal
-
Marteinsson VT, Birrien J-L, Jeanthon C & Prieur D (1996) Numerical taxonomic study of thermophilic Bacillus isolated from three geographically separated deep-sea hydrothermal. FEMS Microbiol Ecol 21: 255-266.
-
(1996)
FEMS Microbiol Ecol
, vol.21
, pp. 255-266
-
-
Marteinsson, V.T.1
Birrien, J.-L.2
Jeanthon, C.3
Prieur, D.4
-
47
-
-
0000078756
-
Campylobacter nitrofragilis sp. nov., a nitrogen-fixing bacterium associated with roots of Spartina alterniflora
-
McClung CR, Patriquin DG & Davis RE (1983) Campylobacter nitrofragilis sp. nov., a nitrogen-fixing bacterium associated with roots of Spartina alterniflora. Int J Syst Microbiol 133: 605-612.
-
(1983)
Int J Syst Microbiol
, vol.133
, pp. 605-612
-
-
McClung, C.R.1
Patriquin, D.G.2
Davis, R.E.3
-
48
-
-
0842302336
-
Caminibacter profundus sp. nov., a novel thermophile of Nautiliales ord. nov. within the class 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal vent
-
Miroshnichenko ML, L'Haridon S, Schumann P, Spring S, Bonch-Osmolovskaya EA, Jeanthon C & Stackebrandt E (2004) Caminibacter profundus sp. nov., a novel thermophile of Nautiliales ord. nov. within the class 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol 54: 41-45.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 41-45
-
-
Miroshnichenko, M.L.1
L'Haridon, S.2
Schumann, P.3
Spring, S.4
Bonch-Osmolovskaya, E.A.5
Jeanthon, C.6
Stackebrandt, E.7
-
49
-
-
0028976424
-
Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi seamount, Hawaii
-
Moyer CL, Dobbs FC & Karl DM (1995) Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi seamount, Hawaii. Appl Environ Microbiol 61: 1555-1562.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1555-1562
-
-
Moyer, C.L.1
Dobbs, F.C.2
Karl, D.M.3
-
50
-
-
16844387103
-
Nitratiruptor tergarcus gen. nov., sp. nov. and Nitratifractor salsuginis gen. nov., sp. nov., nitrate-reducing chemolithoautotrophs of the ε-Proteobacteria isolated from a deep-sea hydrothermal system in the Mid-Okinawa Trough
-
Nakagawa S, Takai K, Inagaki F, Horikoshi K & Sako Y (2005) Nitratiruptor tergarcus gen. nov., sp. nov. and Nitratifractor salsuginis gen. nov., sp. nov., nitrate-reducing chemolithoautotrophs of the ε-Proteobacteria isolated from a deep-sea hydrothermal system in the Mid-Okinawa Trough. Int J Syst Evol Microbiol 55: 925-933.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 925-933
-
-
Nakagawa, S.1
Takai, K.2
Inagaki, F.3
Horikoshi, K.4
Sako, Y.5
-
51
-
-
0001494966
-
Characterization of large, autotrophic Beggiatoa spp. abundant at hydrothermal vents of the Guaymas basin
-
Nelson DC, Wirsen CO & Jannasch HW (1989) Characterization of large, autotrophic Beggiatoa spp. abundant at hydrothermal vents of the Guaymas basin. Appl Environ Microbiol 55: 2909-2917.
-
(1989)
Appl Environ Microbiol
, vol.55
, pp. 2909-2917
-
-
Nelson, D.C.1
Wirsen, C.O.2
Jannasch, H.W.3
-
52
-
-
0010446341
-
Rapid growth of unusual hydrothermal bacteria observed at new vents during ADVENTURE dive program to the EPR crest at 9°45'-52'N
-
Nelson D, Haymon RM, Lilley M & Lutz R (1991) Rapid growth of unusual hydrothermal bacteria observed at new vents during ADVENTURE dive program to the EPR crest at 9°45'-52'N. EOS Trans Am Geophys Union 72: 481.
-
(1991)
EOS Trans Am Geophys Union
, vol.72
, pp. 481
-
-
Nelson, D.1
Haymon, R.M.2
Lilley, M.3
Lutz, R.4
-
53
-
-
0038347385
-
Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise (13 degrees N)
-
Nercessian O, Reysenbach AL, Prieur D & Jeanthon C (2003) Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise (13 degrees N). Environ Microbiol 5: 492-502.
-
(2003)
Environ Microbiol
, vol.5
, pp. 492-502
-
-
Nercessian, O.1
Reysenbach, A.L.2
Prieur, D.3
Jeanthon, C.4
-
54
-
-
30344473638
-
A novel algorithm and web-based tool for comparing two alternative phylogenetic tress
-
Nye TMW, Lio P & Gilks WR (2006) A novel algorithm and web-based tool for comparing two alternative phylogenetic tress. Bioinformatics 22: 117-119.
-
(2006)
Bioinformatics
, vol.22
, pp. 117-119
-
-
Nye, T.M.W.1
Lio, P.2
Gilks, W.R.3
-
55
-
-
0030036542
-
Identification methods for campylobacters, helicobacters, and related organisms
-
On SLW (1996) Identification methods for campylobacters, helicobacters, and related organisms. Clin Microbiol Rev 9: 405-422.
-
(1996)
Clin Microbiol Rev
, vol.9
, pp. 405-422
-
-
On, S.L.W.1
-
56
-
-
0029124948
-
Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site
-
Polz MF & Cavanaugh CM (1995) Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site. Proc Natl Acad Sci USA 92: 7232-7236.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 7232-7236
-
-
Polz, M.F.1
Cavanaugh, C.M.2
-
57
-
-
0033823565
-
Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a mid-Atlantic ridge hydrothermal vent
-
Reysenbach AL, Longnecker K & Kirshtein J (2000) Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a mid-Atlantic ridge hydrothermal vent. Appl Environ Microbiol 66: 3798-3806.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 3798-3806
-
-
Reysenbach, A.L.1
Longnecker, K.2
Kirshtein, J.3
-
58
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
60
-
-
0031871517
-
Temporal and spatial patterns of biological community development at nascent deep-sea hydrothermal vents (9°50'N, East Pacific Rise)
-
Shank TM, Fornari DJ, Von Damm KL, Lilley MD, Haymon RM & Lutz RA (1998) Temporal and spatial patterns of biological community development at nascent deep-sea hydrothermal vents (9°50'N, East Pacific Rise). Deep-Sea Res II 45: 465-515.
-
(1998)
Deep-Sea Res II
, vol.45
, pp. 465-515
-
-
Shank, T.M.1
Fornari, D.J.2
Von Damm, K.L.3
Lilley, M.D.4
Haymon, R.M.5
Lutz, R.A.6
-
62
-
-
0030741576
-
Phylogenetic analysis and in situ identification of bacteria in activated sludge
-
Snaidr J, Amann R, Huber I, Ludwig W & Schleifer KH (1997) Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl Environ Microbiol 63: 2884-2896.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2884-2896
-
-
Snaidr, J.1
Amann, R.2
Huber, I.3
Ludwig, W.4
Schleifer, K.H.5
-
63
-
-
0344035670
-
Genetic diversity of archaea in deep-sea hydrothermal vent environments
-
Takai K & Horikoshi K (1999) Genetic diversity of archaea in deep-sea hydrothermal vent environments. Genetics 152: 1285-1297.
-
(1999)
Genetics
, vol.152
, pp. 1285-1297
-
-
Takai, K.1
Horikoshi, K.2
-
65
-
-
0037458176
-
Isolation and phylogenetic diversity of members of previously uncultivated ε-Proteobacteria in deep-sea hydrothermal fields
-
Takai K, Inagaki F, Nakagawa S, Hirayama H, Nunoura T, Sako Y, Nealson KH & Horikoshi K (2003) Isolation and phylogenetic diversity of members of previously uncultivated ε-Proteobacteria in deep-sea hydrothermal fields. FEMS Microbiol Lett 218: 167-174.
-
(2003)
FEMS Microbiol Lett
, vol.218
, pp. 167-174
-
-
Takai, K.1
Inagaki, F.2
Nakagawa, S.3
Hirayama, H.4
Nunoura, T.5
Sako, Y.6
Nealson, K.H.7
Horikoshi, K.8
-
66
-
-
0842280569
-
Hydrogenimonas thermophila gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing chemolithoautotroph within the ε-Proteobacteria, isolated from a black smoker in a Central Indian Ridge hydrothermal field
-
Takai K, Nealson KH & Horikoshi K (2004) Hydrogenimonas thermophila gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing chemolithoautotroph within the ε-Proteobacteria, isolated from a black smoker in a Central Indian Ridge hydrothermal field. Int J Syst Evol Microbiol 54: 25-32.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 25-32
-
-
Takai, K.1
Nealson, K.H.2
Horikoshi, K.3
-
67
-
-
32044458392
-
Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of ε-proteobacteria
-
Takai K, Campbell BJ, Cary SC et al. (2005) Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of ε-proteobacteria. Appl Environ Microbiol 71: 7310-7320.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7310-7320
-
-
Takai, K.1
Campbell, B.J.2
Cary, S.C.3
-
68
-
-
0030769205
-
Microbiology and ecology of filamentous sulfur formation
-
Taylor CD &Wirsen CO (1997) Microbiology and ecology of filamentous sulfur formation. Science 277: 1483-1485.
-
(1997)
Science
, vol.277
, pp. 1483-1485
-
-
Taylor, C.D.1
Wirsen, C.O.2
-
69
-
-
0032932428
-
Rapid microbial production of filamentous sulfur mats at hydrothermal vents
-
Taylor CD, Wirsen CO & Gaill F (1999) Rapid microbial production of filamentous sulfur mats at hydrothermal vents. Appl Environ Microbiol 65: 2253-2255.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 2253-2255
-
-
Taylor, C.D.1
Wirsen, C.O.2
Gaill, F.3
-
70
-
-
0036205605
-
Microbial diversity of hydrothermal sediments in the Guaymas basin: Evidence for anaerobic methanotrophic communities
-
Teske A, Hinrichs KU, Edgcomb V, de Vera Gomez A, Kysela D, Sylva SP, Sogin ML & Jannasch HW (2002) Microbial diversity of hydrothermal sediments in the Guaymas basin: evidence for anaerobic methanotrophic communities. Appl Environ Microbiol 68: 1994-2007.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 1994-2007
-
-
Teske, A.1
Hinrichs, K.U.2
Edgcomb, V.3
De Vera Gomez, A.4
Kysela, D.5
Sylva, S.P.6
Sogin, M.L.7
Jannasch, H.W.8
-
71
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG & Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
72
-
-
0025960666
-
Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: Emendation of generic descriptions and proposal of Arcobacter gen. nov.
-
Vandamme P, Falsen E, Rossau R, Hoste B, Segers P, Tytgat R & De Ley J (1991) Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: Emendation of generic descriptions and proposal of Arcobacter gen. nov. Int J Syst Bacteriol 41: 88-103.
-
(1991)
Int J Syst Bacteriol
, vol.41
, pp. 88-103
-
-
Vandamme, P.1
Falsen, E.2
Rossau, R.3
Hoste, B.4
Segers, P.5
Tytgat, R.6
De Ley, J.7
-
73
-
-
0026637182
-
Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens
-
Vandamme P, Vancanneyt M, Pot B et al. (1992) Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens. Int J Syst Bacteriol 42: 344-356.
-
(1992)
Int J Syst Bacteriol
, vol.42
, pp. 344-356
-
-
Vandamme, P.1
Vancanneyt, M.2
Pot, B.3
-
74
-
-
0345195995
-
Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
-
von Wintzingerode F, Gobel UB & Stackebrandt E (1997) Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol Rev 21: 213-229.
-
(1997)
FEMS Microbiol Rev
, vol.21
, pp. 213-229
-
-
Von Wintzingerode, F.1
Gobel, U.B.2
Stackebrandt, E.3
-
75
-
-
19044366366
-
Diversity and abundance of bacteria in an underground oil-storage cavity
-
Watanabe K, Kodama Y & Kaku N (2002) Diversity and abundance of bacteria in an underground oil-storage cavity. BMC Microbiol 2: 23.
-
(2002)
BMC Microbiol
, vol.2
, pp. 23
-
-
Watanabe, K.1
Kodama, Y.2
Kaku, N.3
-
76
-
-
0036140269
-
Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur
-
Wirsen CO, Sievert SM, Cavanaugh CM, Molyneaux SJ, Ahmad A, Taylor LT, DeLong EF & Taylor CD (2002) Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur. Appl Environ Microbiol 68: 316-325.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 316-325
-
-
Wirsen, C.O.1
Sievert, S.M.2
Cavanaugh, C.M.3
Molyneaux, S.J.4
Ahmad, A.5
Taylor, L.T.6
DeLong, E.F.7
Taylor, C.D.8
|