-
1
-
-
0345581658
-
Nuclear ribosomal DNA polymorphism and hybridization in checker mallows (Sidalcea, Malvaceae)
-
Andreasen K., and Baldwin B.G. Nuclear ribosomal DNA polymorphism and hybridization in checker mallows (Sidalcea, Malvaceae). Mol. Phylogenet. Evol. 29 (2003) 563-581
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 563-581
-
-
Andreasen, K.1
Baldwin, B.G.2
-
2
-
-
0026822377
-
Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae
-
Baldwin B.G. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae. Mol. Phylogenet. Evol. 1 (1992) 3-16
-
(1992)
Mol. Phylogenet. Evol.
, vol.1
, pp. 3-16
-
-
Baldwin, B.G.1
-
3
-
-
0000270001
-
The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny
-
Baldwin B.G., Sanderson M.J., Porter J.M., Wojciechowski M.F., Campbell C.S., and Donoghue M.J. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann. Missouri Bot. Gard. 82 (1995) 247-277
-
(1995)
Ann. Missouri Bot. Gard.
, vol.82
, pp. 247-277
-
-
Baldwin, B.G.1
Sanderson, M.J.2
Porter, J.M.3
Wojciechowski, M.F.4
Campbell, C.S.5
Donoghue, M.J.6
-
4
-
-
0345149784
-
Characterization of angiosperm nrDNA polymorphism, paralogy, and pseudogenes
-
Bailey C.D., Carr T.G., Harris S.A., and Hughes C.E. Characterization of angiosperm nrDNA polymorphism, paralogy, and pseudogenes. Mol. Phylogenet. Evol. 29 (2003) 435-455
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 435-455
-
-
Bailey, C.D.1
Carr, T.G.2
Harris, S.A.3
Hughes, C.E.4
-
5
-
-
0034079633
-
Molecular phylogentics of subfamily Calamoideae (Palmae) based on nrDNA ITS and cpDNA rps16 intron sequence data
-
Baker W.J., Hedderson T.A., and Dransfield J. Molecular phylogentics of subfamily Calamoideae (Palmae) based on nrDNA ITS and cpDNA rps16 intron sequence data. Mol. Phylogenet. Evol. 14 (2000) 195-217
-
(2000)
Mol. Phylogenet. Evol.
, vol.14
, pp. 195-217
-
-
Baker, W.J.1
Hedderson, T.A.2
Dransfield, J.3
-
6
-
-
0001260597
-
Cactaceae
-
Kubitzki K. (Ed), Springer, Berlin Heidelberg New York Tokyo
-
Barthlott W., and Hunt D.R. Cactaceae. In: Kubitzki K. (Ed). The families and genera of vascular plants vol. II (1993), Springer, Berlin Heidelberg New York Tokyo 161-197
-
(1993)
The families and genera of vascular plants
, vol.II
, pp. 161-197
-
-
Barthlott, W.1
Hunt, D.R.2
-
7
-
-
0031035491
-
The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications
-
Buckler IV E.S., Ippolito A., and Holtsford T.P. The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications. Genetics 145 (1997) 821-832
-
(1997)
Genetics
, vol.145
, pp. 821-832
-
-
Buckler IV, E.S.1
Ippolito, A.2
Holtsford, T.P.3
-
8
-
-
31744437107
-
Phylogenetic studies of Mammillaria (Cactaceae)-Insights from chloroplast sequence variation and hypothesis testing using the parametric bootstrap
-
Butterworth C.A., and Wallace R.S. Phylogenetic studies of Mammillaria (Cactaceae)-Insights from chloroplast sequence variation and hypothesis testing using the parametric bootstrap. Am. J. Bot. 91 (2004) 1086-1098
-
(2004)
Am. J. Bot.
, vol.91
, pp. 1086-1098
-
-
Butterworth, C.A.1
Wallace, R.S.2
-
9
-
-
0031029173
-
Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic complex (Rosaceae)
-
Campbell C.S., Wojciechowski M.F., Baldwin B.G., Alice L.A., and Donoghue M.J. Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic complex (Rosaceae). Mol. Biol. Evol. 14 (1997) 81-90
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 81-90
-
-
Campbell, C.S.1
Wojciechowski, M.F.2
Baldwin, B.G.3
Alice, L.A.4
Donoghue, M.J.5
-
10
-
-
21344444797
-
Basal cactus phylogeny: implications of Pereskia (Cactaceae) paraphyly for the transition to the cactus life form
-
Edwards E.J., Nyffeler R., and Donoghue M.J. Basal cactus phylogeny: implications of Pereskia (Cactaceae) paraphyly for the transition to the cactus life form. Am. J. Bot. 92 (2005) 1177-1188
-
(2005)
Am. J. Bot.
, vol.92
, pp. 1177-1188
-
-
Edwards, E.J.1
Nyffeler, R.2
Donoghue, M.J.3
-
11
-
-
0003995855
-
-
Komarov Botanical Institute, Academy of Sciences of the USSR, Leningrad pp. 636
-
Fedorov A.A. Chromosome Numbers of Flowering Plants (1969), Komarov Botanical Institute, Academy of Sciences of the USSR, Leningrad pp. 636
-
(1969)
Chromosome Numbers of Flowering Plants
-
-
Fedorov, A.A.1
-
12
-
-
0346971259
-
ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae
-
Goertzen L.R., Cannone J.J., Gutell R.R., and Jansen R.K. ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae. Mol. Phylogenet. Evol. 29 (2003) 216-234
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 216-234
-
-
Goertzen, L.R.1
Cannone, J.J.2
Gutell, R.R.3
Jansen, R.K.4
-
13
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41 (1999) 95-98
-
(1999)
Nucleic Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
14
-
-
33750947200
-
-
Harpke, D., 2005. Non-concerted ITS evolution and analysis of functional and non-functional 5.8S rRNA genes in genus Mammillaria (Cactaceae), Diploma thesis, Martin-Luther-University Halle.
-
-
-
-
15
-
-
33750939309
-
Phylogenetic evaluation of chloroplast trnL-trnF DNA sequence variation in the genus Mammillaria Haworth (Cactaceae)
-
Harpke D., Peterson A., Hoffmann M.H., and Roser M. Phylogenetic evaluation of chloroplast trnL-trnF DNA sequence variation in the genus Mammillaria Haworth (Cactaceae). Schlechtendalia 14 (2006) 7-16
-
(2006)
Schlechtendalia
, vol.14
, pp. 7-16
-
-
Harpke, D.1
Peterson, A.2
Hoffmann, M.H.3
Roser, M.4
-
16
-
-
0034946250
-
Extensive ribosomal DNA genic variation in the columnar cactus Lophocereus
-
Hartmann S., Nason J.D., and Bhattacharya D. Extensive ribosomal DNA genic variation in the columnar cactus Lophocereus. J. Mol. Evol. 53 (2001) 124-134
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 124-134
-
-
Hartmann, S.1
Nason, J.D.2
Bhattacharya, D.3
-
17
-
-
0028250305
-
Structural organization and regulation of transcription by RNA polymerase I of plant nuclear ribosomal RNA genes
-
Nover L. (Ed), Springer, Berlin, Heidelberg
-
Hemleben V., and Zentgraf U. Structural organization and regulation of transcription by RNA polymerase I of plant nuclear ribosomal RNA genes. In: Nover L. (Ed). Plant Promoters and Transcription Factors (1994), Springer, Berlin, Heidelberg 3-24
-
(1994)
Plant Promoters and Transcription Factors
, pp. 3-24
-
-
Hemleben, V.1
Zentgraf, U.2
-
18
-
-
0030056762
-
Conservation patterns in angiosperm rDNA ITS2 sequences
-
Hershkovitz M.A., and Zimmer E.A. Conservation patterns in angiosperm rDNA ITS2 sequences. Nucleic Acids Res. 24 (1996) 2857-2867
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 2857-2867
-
-
Hershkovitz, M.A.1
Zimmer, E.A.2
-
19
-
-
0030614097
-
On the evolutionary origins of the cacti
-
Hershkovitz M.A., and Zimmer E.A. On the evolutionary origins of the cacti. Taxon 46 (1997) 217-232
-
(1997)
Taxon
, vol.46
, pp. 217-232
-
-
Hershkovitz, M.A.1
Zimmer, E.A.2
-
20
-
-
0002888491
-
Ribosomal DNA sequences and angiosperm systematics
-
Hollingsworth P.M., Bateman R.M., and Cornall R.J. (Eds), Taylor & Francis, London
-
Hershkovitz M.A., Zimmer E.A., and Hahn W.J. Ribosomal DNA sequences and angiosperm systematics. In: Hollingsworth P.M., Bateman R.M., and Cornall R.J. (Eds). Molecular Systematics and Plant Evolution (1999), Taylor & Francis, London 268-326
-
(1999)
Molecular Systematics and Plant Evolution
, pp. 268-326
-
-
Hershkovitz, M.A.1
Zimmer, E.A.2
Hahn, W.J.3
-
26
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16 (1980) 111-120
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
27
-
-
0037357446
-
Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
-
Koch M.A., Dobes C., and Mitchell-Olds T. Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae). Mol. Biol. Evol. 20 (2003) 338-350
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 338-350
-
-
Koch, M.A.1
Dobes, C.2
Mitchell-Olds, T.3
-
28
-
-
12444329869
-
Organization, differential expression and methylation of rDNA in artificial Solanum allopolyploids
-
Komarova N.Y., Grabe T., Huigen D.J., Hemleben V., and Volkov R.A. Organization, differential expression and methylation of rDNA in artificial Solanum allopolyploids. Plant Mol. Biol. 56 (2004) 439-463
-
(2004)
Plant Mol. Biol.
, vol.56
, pp. 439-463
-
-
Komarova, N.Y.1
Grabe, T.2
Huigen, D.J.3
Hemleben, V.4
Volkov, R.A.5
-
29
-
-
0345289750
-
Concerted evolution of multigene families
-
Sinauer Assoc., Inc, Suderland, MA
-
Li W.H. Concerted evolution of multigene families. Molecular Evolution (1997), Sinauer Assoc., Inc, Suderland, MA 309-334
-
(1997)
Molecular Evolution
, pp. 309-334
-
-
Li, W.H.1
-
30
-
-
0030904569
-
Synthesis of functional eukaryotic ribosomal RNAs in trans: Development of a novel in vivo rDNA system for dissecting ribosome biogenesis
-
Liang W.Q., and Fournier M.J. Synthesis of functional eukaryotic ribosomal RNAs in trans: Development of a novel in vivo rDNA system for dissecting ribosome biogenesis. Proc. Natl. Acad. Sci. USA 94 (1997) 2864-2868
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 2864-2868
-
-
Liang, W.Q.1
Fournier, M.J.2
-
31
-
-
0028518955
-
A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes
-
Liu J.S., and Schardl C.L. A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes. Plant Mol. Biol. 26 (1994) 775-778
-
(1994)
Plant Mol. Biol.
, vol.26
, pp. 775-778
-
-
Liu, J.S.1
Schardl, C.L.2
-
32
-
-
0031020581
-
The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants
-
Mai J.C., and Coleman W. The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants. J. Mol. Evol. 44 (1997) 258-271
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 258-271
-
-
Mai, J.C.1
Coleman, W.2
-
33
-
-
0034782104
-
Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus
-
Mayol M., and Rosselò J.A. Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus. Mol. Phylogenet. Evol. 19 (2001) 167-176
-
(2001)
Mol. Phylogenet. Evol.
, vol.19
, pp. 167-176
-
-
Mayol, M.1
Rosselò, J.A.2
-
35
-
-
0036189278
-
Phylogenetic relationships in the cactus family (Cactaceae) based on evidence from trnK/matK and trnL-trnF sequences
-
Nyffeler R. Phylogenetic relationships in the cactus family (Cactaceae) based on evidence from trnK/matK and trnL-trnF sequences. Am. J. Bot. 89 (2002) 312-326
-
(2002)
Am. J. Bot.
, vol.89
, pp. 312-326
-
-
Nyffeler, R.1
-
36
-
-
2442588906
-
A molecular phylogeny of the genus Gagea (Liliaceae) in Germany inferred from non-coding chloroplast and nuclear DNA sequences
-
Peterson A., John H., Koch E., and Peterson J. A molecular phylogeny of the genus Gagea (Liliaceae) in Germany inferred from non-coding chloroplast and nuclear DNA sequences. Plant Syst. Evol. 245 (2004) 145-162
-
(2004)
Plant Syst. Evol.
, vol.245
, pp. 145-162
-
-
Peterson, A.1
John, H.2
Koch, E.3
Peterson, J.4
-
38
-
-
2442516230
-
Recent origin and phylogenetic utility of divergent ITS putative pseudogenes: a case study from Naucleeae (Rubiaceae)
-
Razafimandimbison S.G., Kellogg E.A., and Bremer B. Recent origin and phylogenetic utility of divergent ITS putative pseudogenes: a case study from Naucleeae (Rubiaceae). Syst. Biol. 53 (2004) 177-192
-
(2004)
Syst. Biol.
, vol.53
, pp. 177-192
-
-
Razafimandimbison, S.G.1
Kellogg, E.A.2
Bremer, B.3
-
39
-
-
12744272176
-
Evolution by reticulation: European dogroses originated by multiple hybridization across the genus Rosa
-
Ritz C.M., Schmuths H., and Wissemann V. Evolution by reticulation: European dogroses originated by multiple hybridization across the genus Rosa. J. Hered. 96 (2005) 4-14
-
(2005)
J. Hered.
, vol.96
, pp. 4-14
-
-
Ritz, C.M.1
Schmuths, H.2
Wissemann, V.3
-
40
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas J., Sánchez-Delbarrio J.C., Messeguer X., and Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19 (2003) 2496-2497
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sánchez-Delbarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
41
-
-
1642503223
-
The rDNA ITS region in the lessepsian marine angiosperm Halophila stipulacea (Forssk.) Aschers. (Hydrocharitaceae): intragenomic variability and putative pseudogenic sequences
-
Ruggiero M.V., and Procaccini G. The rDNA ITS region in the lessepsian marine angiosperm Halophila stipulacea (Forssk.) Aschers. (Hydrocharitaceae): intragenomic variability and putative pseudogenic sequences. J. Mol. Evol. 58 (2004) 115-121
-
(2004)
J. Mol. Evol.
, vol.58
, pp. 115-121
-
-
Ruggiero, M.V.1
Procaccini, G.2
-
42
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting positions-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
43
-
-
0028509254
-
TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
-
Van de Peer Y., and De Wachter R. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comp. Appl. Biosci. 10 (1994) 569-570
-
(1994)
Comp. Appl. Biosci.
, vol.10
, pp. 569-570
-
-
Van de Peer, Y.1
De Wachter, R.2
-
44
-
-
12044254346
-
Surveys of gene families using polymerase chain reaction: PCR selection and genetic drift
-
Wagner A., Blackstone N., Cartwright P., Dick M., Misof B., Snow P., Wagner G.P., Barrels J., Murtha M., and Pendleton J. Surveys of gene families using polymerase chain reaction: PCR selection and genetic drift. Syst. Biol. 43 (1994) 250-261
-
(1994)
Syst. Biol.
, vol.43
, pp. 250-261
-
-
Wagner, A.1
Blackstone, N.2
Cartwright, P.3
Dick, M.4
Misof, B.5
Snow, P.6
Wagner, G.P.7
Barrels, J.8
Murtha, M.9
Pendleton, J.10
-
45
-
-
33750934459
-
-
Wissemann, V., 2003. Hybridization and the evolution of the nrITS spacer region. In: Sharma, A.K., Sharma, A. (Eds.), Plant Genome, Biodiversity and Evolution, Part A: Phanerogams. Sci. Publ. Inc., vol. 1. Enfield, New Hampshire, pp. 57-71.
-
-
-
-
46
-
-
15944408081
-
The genus Rosa (Rosoideae, Rosaceae) revisited: molecular analysis of nrITS-1 and atpB-rbsL intergenic spacer (IGS) versus conventional taxonomy
-
Wissemann V., and Ritz C.M. The genus Rosa (Rosoideae, Rosaceae) revisited: molecular analysis of nrITS-1 and atpB-rbsL intergenic spacer (IGS) versus conventional taxonomy. Bot. J. Linn. Soc. 147 (2005) 275-290
-
(2005)
Bot. J. Linn. Soc.
, vol.147
, pp. 275-290
-
-
Wissemann, V.1
Ritz, C.M.2
-
47
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA Genes for phylogenetics
-
Innis N., Gelfand D., Sninsky J., and White J. (Eds), Academic Press, New York
-
White T.J., Bruns T.D., Lee S.B., and Taylor J.W. Amplification and direct sequencing of fungal ribosomal RNA Genes for phylogenetics. In: Innis N., Gelfand D., Sninsky J., and White J. (Eds). PCR-Protocols and Applications-A Laboratory Manual (1990), Academic Press, New York 315-322
-
(1990)
PCR-Protocols and Applications-A Laboratory Manual
, pp. 315-322
-
-
White, T.J.1
Bruns, T.D.2
Lee, S.B.3
Taylor, J.W.4
-
48
-
-
0001548957
-
Generic circumscription and relationships in the tribe Melanthieae (Liliales, Melanthiaceae), with emphasis on Zigadenus: evidence from ITS and trnL-F sequence data
-
Zomlefer W.B., Williams N.H., Whitten W.M., and Judd W.S. Generic circumscription and relationships in the tribe Melanthieae (Liliales, Melanthiaceae), with emphasis on Zigadenus: evidence from ITS and trnL-F sequence data. Am. J. Bot. 88 (2001) 1657-1669
-
(2001)
Am. J. Bot.
, vol.88
, pp. 1657-1669
-
-
Zomlefer, W.B.1
Williams, N.H.2
Whitten, W.M.3
Judd, W.S.4
-
49
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|