-
1
-
-
0036213859
-
Evidence of gene conversion events between paralogous sequences produced by tetraploidization in Salmoninae fish
-
ANGERS, B., K. GHARBI and A. ESTOUP, 2002 Evidence of gene conversion events between paralogous sequences produced by tetraploidization in Salmoninae fish. J. Mol. Evol. 54: 501-510.
-
(2002)
J. Mol. Evol.
, vol.54
, pp. 501-510
-
-
Angers, B.1
Gharbi, K.2
Estoup, A.3
-
2
-
-
24744446039
-
Gene conversion drives the evolution of HINTW, an ampliconic gene on the female-specific avian W chromosome
-
BACKSTROM, N., H. CEPLITIS, S. BERLIN and H. ELLEGREN, 2005 Gene conversion drives the evolution of HINTW, an ampliconic gene on the female-specific avian W chromosome. Mol. Biol. Evol. 22: 1992-1999.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1992-1999
-
-
Backstrom, N.1
Ceplitis, H.2
Berlin, S.3
Ellegren, H.4
-
3
-
-
0033891353
-
Extensive duplication and reshuffling in the Arabidopsis genome
-
BLANC, G., A. BARAKAT, R. GUYOT, R. COOKE and M. DELSENY, 2000 Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell 12: 1093-1102.
-
(2000)
Plant Cell
, vol.12
, pp. 1093-1102
-
-
Blanc, G.1
Barakat, A.2
Guyot, R.3
Cooke, R.4
Delseny, M.5
-
5
-
-
0003851228
-
-
Blackwell Science, Malden, MA
-
CARROLL, S. B., J. K. GRENIER and S. D. WEATHERBEE, 2004 From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design. Blackwell Science, Malden, MA.
-
(2004)
From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design
-
-
Carroll, S.B.1
Grenier, J.K.2
Weatherbee, S.D.3
-
6
-
-
0031798052
-
A maize Myb homolog is encoded by a multicopy gene complex
-
CHOPRA, S., P. ATHMA, X. G. LI and T. PETERSON, 1998 A maize Myb homolog is encoded by a multicopy gene complex. Mol. Gen. Genet. 260: 372-380.
-
(1998)
Mol. Gen. Genet.
, vol.260
, pp. 372-380
-
-
Chopra, S.1
Athma, P.2
Li, X.G.3
Peterson, T.4
-
7
-
-
0034788887
-
Tissue-specific patterns of a maize Myb transcription factor are epigenetically regulated
-
COCCIOLONE, S. M., S. CHOPRA, S. A. FLINT-GARCIA, M. D. MCMULLEN and T. PETERSON, 2001 Tissue-specific patterns of a maize Myb transcription factor are epigenetically regulated. Plant J. 27: 467-478.
-
(2001)
Plant J.
, vol.27
, pp. 467-478
-
-
Cocciolone, S.M.1
Chopra, S.2
Flint-Garcia, S.A.3
McMullen, M.D.4
Peterson, T.5
-
8
-
-
0027728764
-
Maize anthocyanin regulatory gene pl is a duplicate of c1 that functions in the plant
-
CONE, K. C., S. M. COCCIOLONE, F. A. BURR and B. BURR, 1993 Maize anthocyanin regulatory gene pl is a duplicate of c1 that functions in the plant. Plant Cell 5: 1795-1805.
-
(1993)
Plant Cell
, vol.5
, pp. 1795-1805
-
-
Cone, K.C.1
Cocciolone, S.M.2
Burr, F.A.3
Burr, B.4
-
9
-
-
0032125381
-
Transcriptional regulators and the evolution of plant form
-
DOEBLEY, J., and L. LUKENS, 1998 Transcriptional regulators and the evolution of plant form. Plant Cell 10: 1075-1082.
-
(1998)
Plant Cell
, vol.10
, pp. 1075-1082
-
-
Doebley, J.1
Lukens, L.2
-
10
-
-
0029100605
-
Molecular organization and germinal instability of R-stippled maize
-
EGGLESTON, W. B., M. ALLEMAN and J. L. KERMICLE, 1995 Molecular organization and germinal instability of R-stippled maize. Genetics 141: 347-360.
-
(1995)
Genetics
, vol.141
, pp. 347-360
-
-
Eggleston, W.B.1
Alleman, M.2
Kermicle, J.L.3
-
11
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
FELSENSTEIN, J., 1985 Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
0002557518
-
Molecular clocks and nucleotide substitution rates in higher plants
-
edited by M. K. Hecht, W. C. Steere and B. Wallace. Plenum, New York
-
GAUT, B. S., 1998 Molecular clocks and nucleotide substitution rates in higher plants, pp. 93-120 in Evolutionary Biology, edited by M. K. Hecht, W. C. Steere and B. Wallace. Plenum, New York.
-
(1998)
Evolutionary Biology
, pp. 93-120
-
-
Gaut, B.S.1
-
13
-
-
0025729397
-
Alternatively spliced products of the maize P gene encode proteins with homology to the DNA binding domain of Myb-like transcription factors
-
GROTEWOLD, E., P. ATHMA and T. PETERSON, 1991 Alternatively spliced products of the maize P gene encode proteins with homology to the DNA binding domain of Myb-like transcription factors. Proc. Natl. Acad. Sci. USA 88: 4587-4591.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 4587-4591
-
-
Grotewold, E.1
Athma, P.2
Peterson, T.3
-
14
-
-
0029891606
-
Evolution of anthocyanin biosynthesis in maize kernels: The role of regulatory and enzymatic loci
-
HANSON, M. A., B. S. GAUT, A. O. STEC, S. I. FUERSTENBERG, M. M. GOODMAN et al., 1996 Evolution of anthocyanin biosynthesis in maize kernels: the role of regulatory and enzymatic loci. Genetics 143: 1395-1407.
-
(1996)
Genetics
, vol.143
, pp. 1395-1407
-
-
Hanson, M.A.1
Gaut, B.S.2
Stec, A.O.3
Fuerstenberg, S.I.4
Goodman, M.M.5
-
15
-
-
0001335113
-
From teosinte to maize: The catastrophic sexual transmutation
-
ILTIS, H. H., 1983 From teosinte to maize: the catastrophic sexual transmutation. Science 222: 886-894.
-
(1983)
Science
, vol.222
, pp. 886-894
-
-
Iltis, H.H.1
-
16
-
-
0347318054
-
Ordered origin of the typical two- and three-repeat Myb genes
-
JIANG, C., J. GU, X. GU, S. CHOPRA and T. PETERSON, 2004 Ordered origin of the typical two- and three-repeat Myb genes. Gene 326: 13-22.
-
(2004)
Gene
, vol.326
, pp. 13-22
-
-
Jiang, C.1
Gu, J.2
Gu, X.3
Chopra, S.4
Peterson, T.5
-
17
-
-
0024743343
-
Isolation and molecular analysis of the maize P locus
-
LECHELT, C., T. PETERSON, A. LAIRD, J. CHEN, S. L. DELLAPORTA et al., 1989 Isolation and molecular analysis of the maize P locus. Mol. Gen. Genet. 219: 225-234.
-
(1989)
Mol. Gen. Genet.
, vol.219
, pp. 225-234
-
-
Lechelt, C.1
Peterson, T.2
Laird, A.3
Chen, J.4
Dellaporta, S.L.5
-
18
-
-
0035697441
-
Gene conversion within regulatory sequences generates maize r alleles with altered gene expression
-
LI, Y., J. P. BERNOT, C. ILLINGWORTH, W. LISON, K. M. BERNOT et al., 2001 Gene conversion within regulatory sequences generates maize r alleles with altered gene expression. Genetics 159: 1727-1740.
-
(2001)
Genetics
, vol.159
, pp. 1727-1740
-
-
Li, Y.1
Bernot, J.P.2
Illingworth, C.3
Lison, W.4
Bernot, K.M.5
-
19
-
-
0036889175
-
Functional evolution of noncoding DNA
-
LUDWIG, M. Z., 2002 Functional evolution of noncoding DNA. Curr. Opin. Genet. Dev. 12: 634-639.
-
(2002)
Curr. Opin. Genet. Dev.
, vol.12
, pp. 634-639
-
-
Ludwig, M.Z.1
-
20
-
-
0034598832
-
Evidence for stabilizing selection in a eukaryotic enhancer element
-
LUDWIG, M. Z., C. BERGMAN, N. H. PATEL and M. KREITMAN, 2000 Evidence for stabilizing selection in a eukaryotic enhancer element. Nature 403: 564-567.
-
(2000)
Nature
, vol.403
, pp. 564-567
-
-
Ludwig, M.Z.1
Bergman, C.2
Patel, N.H.3
Kreitman, M.4
-
21
-
-
0025078528
-
Maize R gene family: Tissue-specific helix-loop-helix proteins
-
LUDWIG, S. R., and S. R. WESSLER, 1990 Maize R gene family: tissue-specific helix-loop-helix proteins. Cell 62: 849-851.
-
(1990)
Cell
, vol.62
, pp. 849-851
-
-
Ludwig, S.R.1
Wessler, S.R.2
-
22
-
-
0038543069
-
Biased gene conversion: Implications for genome and sex evolution
-
MARAIS, G., 2003 Biased gene conversion: implications for genome and sex evolution. Trends Genet. 19: 330-338.
-
(2003)
Trends Genet.
, vol.19
, pp. 330-338
-
-
Marais, G.1
-
23
-
-
0033398582
-
The gene conversion hypothesis of MHC evolution: A review
-
MARTINSOHN, J. T., A. B. SOUSA, L. A. GUETHLEIN and J. C. HOWARD, 1999 The gene conversion hypothesis of MHC evolution: a review. Immunogenetics 50: 168-200.
-
(1999)
Immunogenetics
, vol.50
, pp. 168-200
-
-
Martinsohn, J.T.1
Sousa, A.B.2
Guethlein, L.A.3
Howard, J.C.4
-
24
-
-
0036613237
-
Extensive genomic duplication during early chordate evolution
-
MCLYSAGHT, A., K. HOKAMP and K. H. WOLFE, 2002 Extensive genomic duplication during early chordate evolution. Nat. Genet. 31: 200-204.
-
(2002)
Nat. Genet.
, vol.31
, pp. 200-204
-
-
McLysaght, A.1
Hokamp, K.2
Wolfe, K.H.3
-
25
-
-
0026625552
-
Reconstitutional mutagenesis of the maize P gene by short-range Ac transpositions
-
MORENO, M. A., J. CHEN, I. GREENBLATT and S. L. DELLAPORTA, 1992 Reconstitutional mutagenesis of the maize P gene by short-range Ac transpositions. Genetics 131: 939-956.
-
(1992)
Genetics
, vol.131
, pp. 939-956
-
-
Moreno, M.A.1
Chen, J.2
Greenblatt, I.3
Dellaporta, S.L.4
-
26
-
-
0038709266
-
Gene conversion as a source of nucleotide diversity in Plasmodium falciparum
-
NIELSEN, K. M., J. KASPER, M. CHOI, T. BEDFORD, K. KRISTIANSEN et al., 2003 Gene conversion as a source of nucleotide diversity in Plasmodium falciparum. Mol. Biol. Evol. 20: 726-734.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 726-734
-
-
Nielsen, K.M.1
Kasper, J.2
Choi, M.3
Bedford, T.4
Kristiansen, K.5
-
27
-
-
0029004879
-
Gene conversion vs point mutation in generating variability at the antigen recognition site of major histocompatibility complex loci
-
OHTA, T., 1995 Gene conversion vs point mutation in generating variability at the antigen recognition site of major histocompatibility complex loci. J. Mol. Evol. 41: 115-119.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 115-119
-
-
Ohta, T.1
-
28
-
-
0029023091
-
Sequences required for paramutation of the maize b gene map to a region containing the promoter and upstream sequences
-
PATTERSON, G. I., K. M. KUBO, T. SHROYER and V. L. CHANDLER, 1995 Sequences required for paramutation of the maize b gene map to a region containing the promoter and upstream sequences. Genetics 140: 1389-1406.
-
(1995)
Genetics
, vol.140
, pp. 1389-1406
-
-
Patterson, G.I.1
Kubo, K.M.2
Shroyer, T.3
Chandler, V.L.4
-
29
-
-
0031429749
-
Light-dependent spatial and temporal expression of pigment regulatory genes in developing maize seeds
-
PROCISSI, A., S. DOLFINI, A. RONCHI and C. TONELLI, 1997 Light-dependent spatial and temporal expression of pigment regulatory genes in developing maize seeds. Plant Cell 9: 1547-1557.
-
(1997)
Plant Cell
, vol.9
, pp. 1547-1557
-
-
Procissi, A.1
Dolfini, S.2
Ronchi, A.3
Tonelli, C.4
-
30
-
-
0033779754
-
The molecular population genetics of regulatory genes
-
PURUGGANAN, M. D., 2000 The molecular population genetics of regulatory genes. Mol. Ecol. 9: 1451-1461.
-
(2000)
Mol. Ecol.
, vol.9
, pp. 1451-1461
-
-
Purugganan, M.D.1
-
31
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
ROZAS, J., and R. ROZAS, 1999 DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15: 174-175.
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
32
-
-
0021695885
-
Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics
-
SAGHAI-MAROOF, M. A., K. M. SOLIMAN, R. A. JORGENSEN and R. W. ALLARD, 1984 Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc. Natl. Acad. Sci. USA 81: 8014-8018.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 8014-8018
-
-
Saghai-Maroof, M.A.1
Soliman, K.M.2
Jorgensen, R.A.3
Allard, R.W.4
-
33
-
-
0031800925
-
The maize regulatory gene B-Peru contains a DNA rearrangement that specifies tissue-specific expression through both positive and negative promoter elements
-
SELINGER, D. A., D. LISCH and V. L. CHANDLER, 1998 The maize regulatory gene B-Peru contains a DNA rearrangement that specifies tissue-specific expression through both positive and negative promoter elements. Genetics 149: 1125-1138.
-
(1998)
Genetics
, vol.149
, pp. 1125-1138
-
-
Selinger, D.A.1
Lisch, D.2
Chandler, V.L.3
-
34
-
-
0037388971
-
Rate variation among nuclear genes and the age of polyploidy in Gossypium
-
SENCHINA, D. S., I. ALVAREZ, R. C. CRONN, B. LIU, J. RONG et al., 2003 Rate variation among nuclear genes and the age of polyploidy in Gossypium. Mol. Biol. Evol. 20: 633-643.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 633-643
-
-
Senchina, D.S.1
Alvarez, I.2
Cronn, R.C.3
Liu, B.4
Rong, J.5
-
35
-
-
0033917427
-
Complex structure of a maize Myb gene promoter: Functional analysis in transgenic plants
-
SIDORENKO, L. V., X. LI, S. M. COCCIOLONE, S. CHOPRA, L. TAGLIANI et al., 2000 Complex structure of a maize Myb gene promoter: functional analysis in transgenic plants. Plant J. 22: 471-482.
-
(2000)
Plant J.
, vol.22
, pp. 471-482
-
-
Sidorenko, L.V.1
Li, X.2
Cocciolone, S.M.3
Chopra, S.4
Tagliani, L.5
-
37
-
-
1942485886
-
The effect of gene conversion on the divergence between duplicated genes
-
TESHIMA, K. M., and H. INNAN, 2004 The effect of gene conversion on the divergence between duplicated genes. Genetics 166: 1553-1560.
-
(2004)
Genetics
, vol.166
, pp. 1553-1560
-
-
Teshima, K.M.1
Innan, H.2
-
38
-
-
0033580401
-
The limits of selection during maize domestication
-
WANG, R. L., A. STEC, J. HEY, L. LUKENS and J. DOEBLEY, 1999 The limits of selection during maize domestication. Nature 398: 236-239.
-
(1999)
Nature
, vol.398
, pp. 236-239
-
-
Wang, R.L.1
Stec, A.2
Hey, J.3
Lukens, L.4
Doebley, J.5
-
39
-
-
0042697343
-
The evolution of transcriptional regulation in eukaryotes
-
WRAY, G. A., M. W. HAHN, E. ABOUHEIF, J. P. BALHOFF, M. PIZER et al., 2003 The evolution of transcriptional regulation in eukaryotes. Mol. Biol. Evol. 20: 1377-1419.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1377-1419
-
-
Wray, G.A.1
Hahn, M.W.2
Abouheif, E.3
Balhoff, J.P.4
Pizer, M.5
-
40
-
-
0037197981
-
From the cover: Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize
-
YAO, H., Q. ZHOU, J. LI, H. SMITH, M. YANDEAU et al., 2002 From the cover: molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize. Proc. Natl. Acad. Sci. USA 99: 6157-6162.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 6157-6162
-
-
Yao, H.1
Zhou, Q.2
Li, J.3
Smith, H.4
Yandeau, M.5
-
41
-
-
20144366003
-
The genomes of Oryza sativa: A history of duplications
-
YU, J., J. WANG, W. LIN, S. LI, H. LI et al., 2005 The genomes of Oryza sativa: a history of duplications. PLoS Biol. 3: e38.
-
(2005)
PLoS Biol.
, vol.3
-
-
Yu, J.1
Wang, J.2
Lin, W.3
Li, S.4
Li, H.5
-
42
-
-
27244433906
-
Comparisons of maize pericarp color1 alleles reveal paralogous gene recombination and an organ-specific enhancer region
-
ZHANG, F., and T. PETERSON, 2005 Comparisons of maize pericarp color1 alleles reveal paralogous gene recombination and an organ-specific enhancer region. Plant Cell 17: 903-914.
-
(2005)
Plant Cell
, vol.17
, pp. 903-914
-
-
Zhang, F.1
Peterson, T.2
-
43
-
-
0034485831
-
A segmental gene duplication generated differentially expressed myb-homologous genes in maize
-
ZHANG, P., S. CHOPRA and T. PETERSON, 2000 A segmental gene duplication generated differentially expressed myb-homologous genes in maize. Plant Cell 12: 2311-2322.
-
(2000)
Plant Cell
, vol.12
, pp. 2311-2322
-
-
Zhang, P.1
Chopra, S.2
Peterson, T.3
|