Complex structure of a maize Myb gene promoter: Functional analysis in transgenic plants

Plant Journal

Volumn 22, Issue 6, 2000, Pages 471-482

  Sidorenko, Lyudmila V ^a   Li, Xianggan ^a,b   Cocciolone, Suzy M ^a   Chopra, Surinder ^a   Tagliani, Laura ^c   Bowen, Ben ^c,d   Daniels, Michael ^e   Peterson, Thomas ^a  

^a IOWA STATE UNIVERSITY   (United States)

^b NOVARTIS PHARMA AG   (Switzerland)

^c PIONEER HI BRED INTERNATIONAL INC   (United States)

^d ILLUMINA INC   (United States)

^e Department of Statistics Center for Statistics and Applications in Forensic Evidence Iowa State University 2438 Osborn Dr Ames   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLUCURONIDASE; ENZYME ACTIVITY; FLAVONOID; GENE STRUCTURE; INSERTIONAL MUTAGENESIS; MAIZE; P GENE; PROTEIN DNA INTERACTION; REPORTER GENE; TRANSCRIPTION REGULATION; TRANSGENIC PLANT;

BASE SEQUENCE; BLOTTING, NORTHERN; BLOTTING, SOUTHERN; DNA TRANSPOSABLE ELEMENTS; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, PLANT; GENES, REPORTER; MOLECULAR SEQUENCE DATA; MUTAGENESIS, INSERTIONAL; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS (GENETICS); SEEDS; ZEA MAYS;

EMBRYOPHYTA; ZEA MAYS;

EID: 0033917427     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2000.00750.x     Document Type: Article

References (45)

1. An, G., Mitra, A., Choi, H.K., Costa, M.A., An, K., Thornburg, R.W. and Ryan, C.A. (1989) Functional analysis of the 3′ control region of potato wound inducible proteinase inhibitorII gene. Plant Cell, 1, 115-122.
2. Armstrong, C.L. and Green, C.E. (1985) Establishment and maintenance of friable, embryogenic maize callus and the involvement of L-proline. Planta, 164, 207-214.
3. Athma, P., Grotewold, E. and Peterson, T. (1992) Insertional mutagenesis of the maize P gene by intragenic transposition of Ac. Genetics, 131, 199-209.
4. Block, A., Dangl, J.L., Hahlbrock, K. and Schulze-Lefert, P. (1990) Functional borders, genetic fine structure, and distance requirements of cis elements mediating light responsiveness of the parsley chalcone synthase promoter. Proc. Natl Acad. Sci. USA, 87, 5387-5391.
5. Braun, E.L. and Grotewold, E. (1999) Newly discovered c-myb-like genes rewrite the evolution of the plant myb gene family. Plant Physiol. 121, 21-24.
6. Bureau, T.E. and Wessler, S.R. (1992) Tourist: a large family of small inverted repeat elements frequently associated with maize genes. Plant Cell, 4, 1283-1294.
7. Bureau, T.E. and Wessler, S.R. (1994) Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants. Plant Cell, 6, 907-916.
8. Callis, J., Fromm, M. and Walbot, V. (1987) Introns increase gene expression in cultured maize cells. Genes Dev. 1, 1183-1200.
9. Chopra, S., Athma, P. and Peterson, T. (1996) Alleles of the maize Pgene with distinct tissue specificities encode Myb-homologous proteins with C-terminal replacements. Plant Cell, 8, 1149-1158.
10. DeBlock, M., Botterman, J., Vandirwiele, M., Dockx, J., Thoen, C., Gossele, V., Rao Movva, N., Thompson, C., Van Montagu, M. and Leemans, J. (1987) Engineering herbicide resistance in plants by expression of detoxifying enzyme. EMBO J. 6, 2513-2518.
11. Dennis, E.S., Gerlach, W.L., Pryor, A.J., Bennetzen, J.L., Inglis, A., Llewellyn, D., Sachs, M.M., Ferl, R.J. and Peacock, W.J. (1984) Molecular analysis of the alcohol dehydrogenase (Adhl) gene of maize. Nucl. Acids Res. 12, 3983-4000.
12. Evola, S.V., Burr, F.A. and Burr, B. (1986) The suitability of restriction fragment length polymorphism as genetic markers in maize. Theor. Appl. Genet. 71, 765-771.
13. Fobis-Loisy, I. and Briat, J.F. (1996) Characterization of a tRNA (Lys) (CUU) gene located in the opposite orientation upstream of Zm Fer2 ferritin gene in the maize nuclear genome. Gene, 182, 195-201.
14. Frame, B., Zhang, H., Cocciolone, S., Sidorenko, L., Dietrich, C., Pegg, S.E., Zhen, S., Schnable, P. and Wang, K. (2000) Production of transgenic maize from bombarded type II callus: effect of gold particle size and callus morphology on transformation efficiency. In Vitro Cell. Dev. Biol. - Plant., 36, 21-29.
15. Frish, D.A., van der Geest, A.M.H., Dias, K. and Hall, T.C. (1995) Chromosomal integration is required for spatial regulation of expression from the β-phaseolin promoter. Plant J. 7, 503-512.
16. Gallie, D.R., Sleat, D.E., Watts, J.W., Turner, P.C. and Wilson, T.M. (1987) A comparison of eukaryotic viral 5′-leader sequences as enhancers of mRNA expression in vivo. Nucl. Acids Res. 15, 8693-8711.
17. Gardner, R.C., Howarth, A.J., Hahn, P., Brown-Luedi, M., Shepherd, R.J. and Messing, J. (1981) The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing. Nucl. Acids Res. 9, 2871-2888.
18. Grotewold, E., Athma, P. and Peterson, T. (1991) Alternatively spliced products of the maize P gene encode proteins with homology to the DNA binding domain of Myb-like transcription factors. Proc. Natl Acad. Sci. USA, 88, 4587-4591.
19. Grotewold, E., Drummond, B.J., Bowen, B. and Peterson, T. (1994) The Myb-homologous P gene controls phlobaphene pigmentation in maize floral organs by directly activating a flavonoid biosynthetic gene subset. Cell, 76, 543-553.
20. Jefferson, R.A., Kavanagh, T.A. and Bevan, M.W. (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 20, 3901-3907.
21. Kao, C.-Y., Cocciolone, S.M., Vasil, I.K. and McCarty, D.R. (1996) Localization and interaction of the cis-acting elements for abscisic acid, VIVIPAROUS1, and light activation of the C1 gene of maize. Plant Cell, 8, 1171-1179.
22. Kranz, H.D., Denekamp, M., Greco, R. et al. (1998) Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. Plant J. 16, 263-276.
23. Lechelt, C., Peterson, T., Laird, A., Chen, J., Dellaporta, S.L., Dennis, E., Peacock, W.J. and Starlinger, P. (1989) Isolation and molecular analysis of the maize P locus. Mol. Gen. Genet. 219, 225-234.
24. Martin, C. and Paz-Ares, J. (1997) MYB transcription factors in plants. Trends Genet. 13, 67-73.
25. Meissner, R.C. et al. (1999) Function search in a large transcription factor gene family in Arabidopsis. Assessing the potential of reverse genetics to identify insertion mutations in r2r3 Myb genes. Plant Cell, 11, 1827-1840.
26. Miller, E.C. (1919) Development of the pistillate spikelet and fertilization in Zea mays L. J. Agric, Res. XVIII, 255-265.
27. Mitchell, P.J. and Tjian, R. (1989) Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins. Science, 245, 371-378.
28. Moreno, M.A., Chen, J., Greenblatt, I. and Dellaporta, S.L. (1992) Reconstitutional mutagenesis of the maize P gene by short-range Ac transpositions. Genetics, 131, 939-956.
29. Mukerji, M. and Mahadevan, S. (1997) Characterization of the negative elements involved in silencing the bgl operon of Esherichia coli: possible roles for DNA gyrase, H-NS, and CRP-cAMP in regulation. Mol. Microbiol. 24, 617-627.
30. Oei, S.L., Herzog, H., Hirsch-Kauffmann, M., Schneider, R., Auer, B. and Schweiger, M. (1994) Transcriptional regulation and autoregulation of the human gene for ADP-ribosyltransferase. Mol. Cell. Biochem. 138, 99-104.
31. Rabinowicz, P.D., Braun, E.L., Wolfe, A.D., Bowen, B. and Grotewold, E. (1999) Maize R2R3 myb genes. Sequence analysis reveals amplification in the higher plants. Genetics, 153, 427-444.
32. Romero, I., Fuertes, A., Benito, M.J., Malpica, J.M., Leyva, A. and Paz-Ares, J. (1998) More than 80, R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J. 14, 273-284.
33. Saghai-Maroof, M.A., Soliman, K.M., Jordensen, R.A. and Allard, R.W. (1984) Ribosomal DNA spacer-length polymorphism in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc. Natl Acad. Sci. USA, 81, 8014-8018.
34. Sainz, M.B., Grotewold, E. and Chandler, V.L. (1997) Evidence for direct activation of an anthocyanin promoter by the maize C1 protein and comparison of DNA binding by related Myb domain proteins. Plant Cell, 9, 611-625.
35. SantaLucia, J. Jr (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl Acad. Sci. USA, 95, 1460-1465.
36. Santner, T.J. and Duffy, D.E. (1989) The Statistical Analysis of Discrete Data. New York: Springer Verlag.
37. Scheffler, B., Franken, P., Schutt, E., Schrell, A., Saedler, H. and Wienand, U. (1994) Molecular analysis of C1 alleles in Zea mays defines regions involved in the expression of this regulatory gene. Mol. Gen. Genet. 242, 40-48.
38. Sidorenko, L., Li, X., Tagliani, L., Bowen, B. and Peterson, T. (1999) Characterization of the regulatory elements of the maize P-rr gene by transient expression assays. Plant Mol. Biol. 39, 11-19.
39. Singh, J., Mukerji, M. and Mahadevan, S. (1995) Transcriptional activation of the Escherichia coli bgl operon: negative regulation by DNA structural elements near the promoter. Mol. Microbiol. 17, 1085-1092.
40. Spiro, C. and McMurray, C.T. (1997) Switching of DNA secondary structure in proenkephalin transcriptional regulation. J. Biol. Chem. 272, 33145-33152.
41. Stomp, A.-M. (1992) Histochemical localization of β-glucoronidase. In GUS Protocols: Using the GUS Gene as a Reporter of Gene Expression (Gallagher, S.R. ed.). San Francisco: Academic Press, Inc., pp. 103-113.
42. White, S.E., Habera, L.F. and Wessler, S.R. (1994) Retrotransposon in the flanking regions of normal plant genes: a role for copia-like elements in the evolution of gene structure and expression. Proc. Natl Acad. Sci. USA, 91, 11792-11796.
43. Williams, C.E. and Grotewold, E. (1997) Differences between plant and animal Myb domains are fundamental for DNA binding activity, and chimeric Myb domains have novel DNA binding specificities. J. Biol. Chem, 272, 563-571.
44. Wise, R.P. and Schnable, P.S. (1994) Mapping complementary genes in maize: positioning rf1 and rf2 nuclear fertility restorer loci of Texas (T) cytoplasm relative to RFLP and visible markers. Theor. Appl. Genet. 88, 785-795.
45. Wu, H.Y., Shyy, S.H., Wang, J.C. and Liu, L.F. (1988) Transcription generates positively and negatively supercoiled domains in the template. Cell, 53, 433-440.