-
1
-
-
3442876969
-
Normalization of real-time quantitative reverse transcription-pcr data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
ANDERSEN, C.L., JENSEN, J.L. and ORNTOFT, T.F. (2004). Normalization of real-time quantitative reverse transcription-pcr data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64: 5245-50.
-
(2004)
Cancer Res
, vol.64
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Orntoft, T.F.3
-
2
-
-
0030601129
-
Retinoic acid promotes neural and represses mesodermal gene expression in mouse embryonic stem cells in culture
-
BAIN, G., RAY, W.J., YAO, M. and GOTTLIEB, D.I. (1996). Retinoic acid promotes neural and represses mesodermal gene expression in mouse embryonic stem cells in culture. Biochem Biophys Res Commun 223: 691-4.
-
(1996)
Biochem Biophys Res Commun
, vol.223
, pp. 691-694
-
-
Bain, G.1
Ray, W.J.2
Yao, M.3
Gottlieb, D.I.4
-
3
-
-
0036668567
-
Quantification of mrna using real-time reverse transcription pcr (rt-pcr): Trends and problems
-
BUSTIN, S.A. (2002). Quantification of mrna using real-time reverse transcription pcr (rt-pcr): Trends and problems. J Mol Endocrinol 29: 23-39.
-
(2002)
J Mol Endocrinol
, vol.29
, pp. 23-39
-
-
Bustin, S.A.1
-
4
-
-
0038143611
-
Functional expression cloning of nanog, a pluripotency sustaining factor in embryonic stem cells
-
CHAMBERS, I., COLBY, D., ROBERTSON, M., NICHOLS, J., LEE, S., TWEEDIE, S. and SMITH, A. (2003). Functional expression cloning of nanog, a pluripotency sustaining factor in embryonic stem cells. Cell 113: 643-55.
-
(2003)
Cell
, vol.113
, pp. 643-655
-
-
Chambers, I.1
Colby, D.2
Robertson, M.3
Nichols, J.4
Lee, S.5
Tweedie, S.6
Smith, A.7
-
5
-
-
12344270322
-
Normalization of gene expression measurements in tumor tissues: Comparison of 13 endogenous control genes
-
DE KOK, J.B., ROELOFS, R.W., GIESENDORF, B.A., PENNINGS, J.L., WAAS, E.T., FEUTH, T., SWINKELS, D.W. and SPAN, P.N. (2005). Normalization of gene expression measurements in tumor tissues: Comparison of 13 endogenous control genes. Lab Invest 85: 154-9.
-
(2005)
Lab Invest
, vol.85
, pp. 154-159
-
-
De Kok, J.B.1
Roelofs, R.W.2
Giesendorf, B.A.3
Pennings, J.L.4
Waas, E.T.5
Feuth, T.6
Swinkels, D.W.7
Span, P.N.8
-
6
-
-
0019826665
-
Establishment in culture of pluripotential cells from mouse embryos
-
EVANS, M.J. and KAUFMAN, M.H. (1981). Establishment in culture of pluripotential cells from mouse embryos. Nature 292: 154-6.
-
(1981)
Nature
, vol.292
, pp. 154-156
-
-
Evans, M.J.1
Kaufman, M.H.2
-
7
-
-
0041827036
-
Tracking mesoderm induction and its specification to the hemangioblast during embryonic stem cell differentiation
-
FEHLING, H.J., LACAUD, G., KUBO, A., KENNEDY, M., ROBERTSON, S., KELLER, G. and KOUSKOFF, V. (2003). Tracking mesoderm induction and its specification to the hemangioblast during embryonic stem cell differentiation. Development 130: 4217-27.
-
(2003)
Development
, vol.130
, pp. 4217-4227
-
-
Fehling, H.J.1
Lacaud, G.2
Kubo, A.3
Kennedy, M.4
Robertson, S.5
Keller, G.6
Kouskoff, V.7
-
8
-
-
0035423813
-
Ribosomal 18s rna prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mrna levels in invasive and noninvasive human melanoma cell subpopulations
-
GOIDIN, D., MAMESSIER, A., STAQUET, M.J., SCHMITT, D. and BERTHIER-VERGNES, O. (2001). Ribosomal 18s rna prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mrna levels in invasive and noninvasive human melanoma cell subpopulations. Anal Biochem 295: 17-21.
-
(2001)
Anal Biochem
, vol.295
, pp. 17-21
-
-
Goidin, D.1
Mamessier, A.2
Staquet, M.J.3
Schmitt, D.4
Berthier-Vergnes, O.5
-
9
-
-
0027517354
-
Dynamic expression of the murine achaete-scute homologue mash-1 in the developing nervous system
-
GUILLEMOT, F. and JOYNER, A.L. (1993). Dynamic expression of the murine achaete-scute homologue mash-1 in the developing nervous system. Mech Dev 42: 171-85.
-
(1993)
Mech Dev
, vol.42
, pp. 171-185
-
-
Guillemot, F.1
Joyner, A.L.2
-
10
-
-
0346655258
-
Comparison of ribogreen and 18s rrna quantitation for normalizing real-time rt-pcr expression analysis
-
HASHIMOTO, J.G., BEADLES-BOHLING, A.S. and WIREN, K.M. (2004). Comparison of ribogreen and 18s rrna quantitation for normalizing real-time rt-pcr expression analysis. Biotechniques 36: 54-6, 58-60.
-
(2004)
Biotechniques
, vol.36
, pp. 54-56
-
-
Hashimoto, J.G.1
Beadles-Bohling, A.S.2
Wiren, K.M.3
-
11
-
-
7444225172
-
Reference genes identified in sh-sy5y cells using custom-made gene arrays with validation by quantitative polymerase chain reaction
-
HOERNDLI, F.J., TOIGO, M., SCHILD, A., GOTZ, J. and DAY, P.J. (2004). Reference genes identified in sh-sy5y cells using custom-made gene arrays with validation by quantitative polymerase chain reaction. Anal Biochem 335: 30-41.
-
(2004)
Anal Biochem
, vol.335
, pp. 30-41
-
-
Hoerndli, F.J.1
Toigo, M.2
Schild, A.3
Gotz, J.4
Day, P.J.5
-
12
-
-
20744445658
-
Expression of all wnt genes and their secreted antagonists during mouse blastocyst and postimplantation development
-
KEMP, C., WILLEMS, E., ABDO, S., LAMBIV, L. and LEYNS, L. (2005). Expression of all wnt genes and their secreted antagonists during mouse blastocyst and postimplantation development. Dev Dyn 233: 1064-75.
-
(2005)
Dev Dyn
, vol.233
, pp. 1064-1075
-
-
Kemp, C.1
Willems, E.2
Abdo, S.3
Lambiv, L.4
Leyns, L.5
-
13
-
-
0018146503
-
Hgprt activity changes in preimplantation mouse embryos
-
KRATZER, P.G. and GARTLER, S.M. (1978). Hgprt activity changes in preimplantation mouse embryos. Nature 274: 503-4.
-
(1978)
Nature
, vol.274
, pp. 503-504
-
-
Kratzer, P.G.1
Gartler, S.M.2
-
14
-
-
2342424743
-
Development of definitive endoderm from embryonic stem cells in culture
-
KUBO, A., SHINOZAKI, K., SHANNON, J.M., KOUSKOFF, V., KENNEDY, M., WOO, S., FEHLING, H.J. and KELLER, G. (2004). Development of definitive endoderm from embryonic stem cells in culture. Development 131: 1651-62.
-
(2004)
Development
, vol.131
, pp. 1651-1662
-
-
Kubo, A.1
Shinozaki, K.2
Shannon, J.M.3
Kouskoff, V.4
Kennedy, M.5
Woo, S.6
Fehling, H.J.7
Keller, G.8
-
15
-
-
0027718107
-
Embryonic stem cells differentiate in vitro into cardiomyocytes representing sinusnodal, atrial and ventricular cell types
-
MALTSEV, V.A., ROHWEDEL, J., HESCHELER, J. and WOBUS, A.M. (1993). Embryonic stem cells differentiate in vitro into cardiomyocytes representing sinusnodal, atrial and ventricular cell types. Mech Dev 44: 41-50.
-
(1993)
Mech Dev
, vol.44
, pp. 41-50
-
-
Maltsev, V.A.1
Rohwedel, J.2
Hescheler, J.3
Wobus, A.M.4
-
16
-
-
31544441632
-
Derivation of human embryonic stem cell lines from embryos obtained after IVF and after pgd for monogenic disorders
-
MATEIZEL, I., DE TEMMERMAN, N., ULLMANN, U., CAUFFMAN, G., SERMON, K., VAN DE VELDE, H., DE RYCKE, M., DEGREEF, E., DEVROEY, P., LIEBAERS, I. et al. (2006). Derivation of human embryonic stem cell lines from embryos obtained after IVF and after pgd for monogenic disorders. Hum Reprod. 21: 503-511.
-
(2006)
Hum Reprod
, vol.21
, pp. 503-511
-
-
Mateizel, I.1
De Temmerman, N.2
Ullmann, U.3
Cauffman, G.4
Sermon, K.5
Van De Velde, H.6
De Rycke, M.7
Degreef, E.8
Devroey, P.9
Liebaers, I.10
-
17
-
-
0035988706
-
Differentiating embryonic stem cells: Gapdh, but neither hprt nor beta-tubulin is suitable as an internal standard for measuring rna levels
-
MURPHY, C.L. and POLAK, J.M. (2002). Differentiating embryonic stem cells: Gapdh, but neither hprt nor beta-tubulin is suitable as an internal standard for measuring rna levels. Tissue Eng 8: 551-9.
-
(2002)
Tissue Eng
, vol.8
, pp. 551-559
-
-
Murphy, C.L.1
Polak, J.M.2
-
18
-
-
0034028901
-
Quantitative expression of oct-3/4 defines differentiation, dedifferentiation or self-renewal of es cells
-
NIWA, H., MIYAZAKI, J. and SMITH, A.G. (2000). Quantitative expression of oct-3/4 defines differentiation, dedifferentiation or self-renewal of es cells. Nat Genet 24: 372-6.
-
(2000)
Nat Genet
, vol.24
, pp. 372-376
-
-
Niwa, H.1
Miyazaki, J.2
Smith, A.G.3
-
19
-
-
0037248812
-
Rtprimerdb: The real-time pcr primer and probe database
-
PATTYN, F., SPELEMAN, F., DE PAEPE, A. and VANDESOMPELE, J. (2003). Rtprimerdb: The real-time pcr primer and probe database. Nucleic Acids Res 31: 122-3.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 122-123
-
-
Pattyn, F.1
Speleman, F.2
De Paepe, A.3
Vandesompele, J.4
-
20
-
-
17344392308
-
A new mathematical model for relative quantification in real-time rt-pcr
-
PFAFFL, M.W. (2001). A new mathematical model for relative quantification in real-time rt-pcr. Nucleic Acids Res 29: e45.
-
(2001)
Nucleic Acids Res
, vol.29
-
-
Pfaffl, M.W.1
-
21
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: Bestkeeper excel-based tool using pair-wise correlations
-
PFAFFL, M.W., TICHOPAD, A., PRGOMET, C. and NEUVIANS, T.P. (2004). Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: Bestkeeper excel-based tool using pair-wise correlations. Biotechnol Lett 26: 509-15.
-
(2004)
Biotechnol Lett
, vol.26
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
22
-
-
0037435395
-
Assumption-free analysis of quantitative real-time polymerase chain reaction (pcr) data
-
RAMAKERS, C., RUIJTER, J.M., DEPREZ, R.H. and MOORMAN, A.F. (2003). Assumption-free analysis of quantitative real-time polymerase chain reaction (pcr) data. Neurosci Lett 339: 62-6.
-
(2003)
Neurosci Lett
, vol.339
, pp. 62-66
-
-
Ramakers, C.1
Ruijter, J.M.2
Deprez, R.H.3
Moorman, A.F.4
-
23
-
-
0346250854
-
The transcriptome profile of human embryonic stem cells as defined by sage
-
RICHARDS, M., TAN, S.P., TAN, J.H., CHAN, W.K. and BONGSO, A. (2004). The transcriptome profile of human embryonic stem cells as defined by sage. Stem Cells 22: 51-64.
-
(2004)
Stem Cells
, vol.22
, pp. 51-64
-
-
Richards, M.1
Tan, S.P.2
Tan, J.H.3
Chan, W.K.4
Bongso, A.5
-
24
-
-
0034694128
-
Effect of experimental treatment on housekeeping gene expression: Validation by real-time, quantitative rt-pcr
-
SCHMITTGEN, T.D. and ZAKRAJSEK, B.A. (2000). Effect of experimental treatment on housekeeping gene expression: Validation by real-time, quantitative rt-pcr. J Biochem Biophys Methods 46: 69-81.
-
(2000)
J Biochem Biophys Methods
, vol.46
, pp. 69-81
-
-
Schmittgen, T.D.1
Zakrajsek, B.A.2
-
25
-
-
0034633526
-
Effects of eight growth factors on the differentiation of cells derived from human embryonic stem cells
-
SCHULDINER, M., YANUKA, O., ITSKOVITZ-ELDOR, J., MELTON, D.A. and BENVENISTY, N. (2000). Effects of eight growth factors on the differentiation of cells derived from human embryonic stem cells. Proc Natl Acad Sci USA 97: 11307-12.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 11307-11312
-
-
Schuldiner, M.1
Yanuka, O.2
Itskovitz-Eldor, J.3
Melton, D.A.4
Benvenisty, N.5
-
26
-
-
0001884951
-
Culture and differentiation of embryonic stem cells
-
SMITH, A.G. (1991). Culture and differentiation of embryonic stem cells. J Tiss Cult Meth 13: 89-94.
-
(1991)
J Tiss Cult Meth
, vol.13
, pp. 89-94
-
-
Smith, A.G.1
-
27
-
-
0035189927
-
Embryo-derived stem cells: Of mice and men
-
SMITH, A.G. (2001). Embryo-derived stem cells: Of mice and men. Annu Rev Cell Dev Biol 17: 435-62.
-
(2001)
Annu Rev Cell Dev Biol
, vol.17
, pp. 435-462
-
-
Smith, A.G.1
-
28
-
-
0035161457
-
Unsuitability of using ribosomal rna as loading control for northern blot analyses related to the imbalance between messenger and ribosomal rna content in rat mammary tumors
-
SOLANAS, M., MORAL, R. and ESCRICH, E. (2001). Unsuitability of using ribosomal rna as loading control for northern blot analyses related to the imbalance between messenger and ribosomal rna content in rat mammary tumors. Anal Biochem 288: 99-102.
-
(2001)
Anal Biochem
, vol.288
, pp. 99-102
-
-
Solanas, M.1
Moral, R.2
Escrich, E.3
-
29
-
-
1542328972
-
Properties of the reverse transcription reaction in mrna quantification
-
STAHLBERG, A., HAKANSSON, J., XIAN, X., SEMB, H. and KUBISTA, M. (2004). Properties of the reverse transcription reaction in mrna quantification. Clin Chem 50: 509-15.
-
(2004)
Clin Chem
, vol.50
, pp. 509-515
-
-
Stahlberg, A.1
Hakansson, J.2
Xian, X.3
Semb, H.4
Kubista, M.5
-
30
-
-
15444373286
-
Statistical modeling for selecting housekeeper genes
-
SZABO, A., PEROU, C.M., KARACA, M., PERREARD, L., QUACKENBUSH, J.F. and BERNARD, P.S. (2004). Statistical modeling for selecting housekeeper genes. Genome Biol 5: R59.
-
(2004)
Genome Biol
, vol.5
-
-
Szabo, A.1
Perou, C.M.2
Karaca, M.3
Perreard, L.4
Quackenbush, J.F.5
Bernard, P.S.6
-
31
-
-
27644504639
-
Characterization of mesendoderm: A diverging point of the definitive endoderm and mesoderm in embryonic stem cell differentiation culture
-
TADA, S., ERA, T., FURUSAWA, C., SAKURAI, H., NISHIKAWA, S., KINOSHITA, M., NAKAO, K. and CHIBA, T. (2005). Characterization of mesendoderm: A diverging point of the definitive endoderm and mesoderm in embryonic stem cell differentiation culture. Development 132: 4363-74.
-
(2005)
Development
, vol.132
, pp. 4363-4374
-
-
Tada, S.1
Era, T.2
Furusawa, C.3
Sakurai, H.4
Nishikawa, S.5
Kinoshita, M.6
Nakao, K.7
Chiba, T.8
-
32
-
-
0032491416
-
Embryonic stem cell lines derived from human blastocysts
-
THOMSON, J.A., ITSKOVITZ-ELDOR, J., SHAPIRO, S.S., WAKNITZ, M.A., SWIERGIEL, J.J., MARSHALL, V.S. and JONES, J.M. (1998). Embryonic stem cell lines derived from human blastocysts. Science 282: 1145-7.
-
(1998)
Science
, vol.282
, pp. 1145-1147
-
-
Thomson, J.A.1
Itskovitz-Eldor, J.2
Shapiro, S.S.3
Waknitz, M.A.4
Swiergiel, J.J.5
Marshall, V.S.6
Jones, J.M.7
-
33
-
-
0037109753
-
Quantitative real-time reverse transcription polymerase chain reaction: Normalization to rrna or single housekeeping genes is inappropriate for human tissue biopsies
-
TRICARICO, C., PINZANI, P., BIANCHI, S., PAGLIERANI, M., DISTANTE, V., PAZZAGLI, M., BUSTIN, S.A. and ORLANDO, C. (2002). Quantitative real-time reverse transcription polymerase chain reaction: Normalization to rrna or single housekeeping genes is inappropriate for human tissue biopsies. Anal Biochem 309: 293-300.
-
(2002)
Anal Biochem
, vol.309
, pp. 293-300
-
-
Tricarico, C.1
Pinzani, P.2
Bianchi, S.3
Paglierani, M.4
Distante, V.5
Pazzagli, M.6
Bustin, S.A.7
Orlando, C.8
-
34
-
-
0037129827
-
Accurate normalization of real-time quantitative rt-pcr data by geometric averaging of multiple internal control genes
-
VANDESOMPELE, J., DE PRETER, K., PATTYN, F., POPPE, B., VAN ROY, N., DE PAEPE, A. and SPELEMAN, F. (2002). Accurate normalization of real-time quantitative rt-pcr data by geometric averaging of multiple internal control genes. Genome Biol 3: RESEARCH0034.
-
(2002)
Genome Biol
, vol.3
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
35
-
-
0022595596
-
Measurement of metabolic turnover in single mouse embryos
-
WALES, R.G. (1986). Measurement of metabolic turnover in single mouse embryos. J Reprod Fertil 76: 717-25.
-
(1986)
J Reprod Fertil
, vol.76
, pp. 717-725
-
-
Wales, R.G.1
-
36
-
-
85074914953
-
A pcr primer bank for quantitative gene expression analysis
-
WANG, X. and SEED, B. (2003). A pcr primer bank for quantitative gene expression analysis. Nucleic Acids Res 31: e154.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Wang, X.1
Seed, B.2
-
37
-
-
1842494625
-
Properties of pluripotent human embryonic stem cells bg01 and bg02
-
ZENG, X., MIURA, T., LUO, Y., BHATTACHARYA, B., CONDIE, B., CHEN, J., GINIS, I., LYONS, I., MEJIDO, J., PURI, R.K. et al. (2004). Properties of pluripotent human embryonic stem cells bg01 and bg02. Stem Cells 22: 292-312.
-
(2004)
Stem Cells
, vol.22
, pp. 292-312
-
-
Zeng, X.1
Miura, T.2
Luo, Y.3
Bhattacharya, B.4
Condie, B.5
Chen, J.6
Ginis, I.7
Lyons, I.8
Mejido, J.9
Puri, R.K.10
|