메뉴 건너뛰기




Volumn 128, Issue 1-3, 2006, Pages 145-158

Origin and evolution of the Amyrel gene in the α-amylase multigene family of Diptera

Author keywords

Amylase inhibitor; Gene duplication; Intron loss; Molecular adaptation; Muscomorpha

Indexed keywords

AMYLASE; AMYREL PROTEIN, DROSOPHILA; DNA; DROSOPHILA PROTEIN; PRIMER DNA;

EID: 33749600412     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10709-005-5578-y     Document Type: Article
Times cited : (23)

References (39)
  • 1
    • 7344242178 scopus 로고    scopus 로고
    • Mutation pressure, natural selection, and the evolution of base composition in Drosophila
    • H. Akashi R.M. Kliman A. Eyre-Walker 1998 Mutation pressure, natural selection, and the evolution of base composition in Drosophila Genetica 102/103 49 60
    • (1998) Genetica , vol.102-103 , pp. 49-60
    • Akashi, H.1    Kliman, R.M.2    Eyre-Walker, A.3
  • 2
    • 0025153495 scopus 로고
    • DNA sequence evolution of the amylase multigene family in Drosophila pseudoobscura
    • C.J. Brown C.F. Aquadro W.W. Anderson 1990 DNA sequence evolution of the amylase multigene family in Drosophila pseudoobscura Genetics 126 131 138
    • (1990) Genetics , vol.126 , pp. 131-138
    • Brown, C.J.1    Aquadro, C.F.2    Anderson, W.W.3
  • 3
    • 0035043494 scopus 로고    scopus 로고
    • Divergence between Drosophila santomea and allopatric or sympatric populations of D. yakuba using paralogous amylase genes and migration scenarios along the volcanic line
    • M.-L. Cariou J.-F. Silvain V. Daubin J.-L. Da Lage D. Lachaise 2001 Divergence between Drosophila santomea and allopatric or sympatric populations of D. yakuba using paralogous amylase genes and migration scenarios along the volcanic line Mol. Ecol. 10 649 660
    • (2001) Mol. Ecol. , vol.10 , pp. 649-660
    • Cariou, M.-L.1    Silvain, J.-F.2    Daubin, V.3    Da Lage, J.-L.4    Lachaise, D.5
  • 4
    • 0034713903 scopus 로고    scopus 로고
    • Structural similarities and evolutionary relationships in chloride-dependent α-amylases
    • S. D'Amico C. Gerday G. Feller 2000 Structural similarities and evolutionary relationships in chloride-dependent α-amylases Gene 253 95 105
    • (2000) Gene , vol.253 , pp. 95-105
    • D'Amico, S.1    Gerday, C.2    Feller, G.3
  • 5
    • 0033760375 scopus 로고    scopus 로고
    • Molecular characterization and evolution of the amylase multigene family of Drosophila ananassae
    • J.-L. Da Lage F. Maczkowiak M.-L. Cariou 2000 Molecular characterization and evolution of the amylase multigene family of Drosophila ananassae J. Mol. Evol. 51 391 403
    • (2000) J. Mol. Evol. , vol.51 , pp. 391-403
    • Da Lage, J.-L.1    MacZkowiak, F.2    Cariou, M.-L.3
  • 7
    • 13144251113 scopus 로고    scopus 로고
    • Amyrel, a paralogous gene of the amylase gene family in Drosophila melanogaster and the Sophophora subgenus
    • J.-L. Da Lage E. Renard F. Chartois F. Lemeunier M.L. Cariou 1998 Amyrel, a paralogous gene of the amylase gene family in Drosophila melanogaster and the Sophophora subgenus Proc. Natl. Acad. Sci. USA 95 6848 6853
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6848-6853
    • Da Lage, J.-L.1    Renard, E.2    Chartois, F.3    Lemeunier, F.4    Cariou, M.L.5
  • 9
    • 0029837344 scopus 로고    scopus 로고
    • Distribution and evolution of introns in Drosophila amylase genes
    • J.-L. Da Lage M. M.-L. Wegnez Cariou 1996 Distribution and evolution of introns in Drosophila amylase genes J. Mol. Evol. 43 334 347
    • (1996) J. Mol. Evol. , vol.43 , pp. 334-347
    • Da Lage, J.-L.1    Wegnez Cariou, M.M.-L.2
  • 10
    • 0030049028 scopus 로고    scopus 로고
    • Variation in sex-, stage- and tissue-specific expression of the amylase genes in Drosophila ananassae
    • J.-L. Da Lage A. Klarenberg M.-L. Cariou 1996 Variation in sex-, stage- and tissue-specific expression of the amylase genes in Drosophila ananassae Heredity 76 9 18
    • (1996) Heredity , vol.76 , pp. 9-18
    • Da Lage, J.-L.1    Klarenberg, A.2    Cariou, M.-L.3
  • 11
    • 0027446476 scopus 로고
    • A role for reverse transcripts in gene conversion
    • L.K. Derr J.N. Strathern 1993 A role for reverse transcripts in gene conversion Nature 361 170 173
    • (1993) Nature , vol.361 , pp. 170-173
    • Derr, L.K.1    Strathern, J.N.2
  • 12
    • 0036671719 scopus 로고    scopus 로고
    • Toward a catalog for the transcripts and proteins (sialome) from the salivary gland of the malaria vector Anopheles gambiae
    • I.M.B. Francischetti J.G. Valenzuela V.M. Pham M.K. Garfield J.M.C. Ribeiro 2002 Toward a catalog for the transcripts and proteins (sialome) from the salivary gland of the malaria vector Anopheles gambiae J. Exp. Biol. 205 2429 2451
    • (2002) J. Exp. Biol. , vol.205 , pp. 2429-2451
    • Francischetti, I.M.B.1    Valenzuela, J.G.2    Pham, V.M.3    Garfield, M.K.4    Ribeiro, J.M.C.5
  • 13
    • 0028348197 scopus 로고
    • Intron loss from the NADH dehydrogenase subunit 4 gene of lettuce mitochondrial DNA: Evidence for homologous recombination of a cDNA intermediate
    • K.T. Geiss G.M. Abbas C.A. Makaroff 1994 Intron loss from the NADH dehydrogenase subunit 4 gene of lettuce mitochondrial DNA: evidence for homologous recombination of a cDNA intermediate Mol. Gen. Genet. 243 97 105
    • (1994) Mol. Gen. Genet. , vol.243 , pp. 97-105
    • Geiss, K.T.1    Abbas, G.M.2    Makaroff, C.A.3
  • 15
    • 0030729704 scopus 로고    scopus 로고
    • Molecular evolution of the Amy multigenes in the subgenus Sophophora of Drosophila
    • N. Inomata H. Tachida T. Yamazaki 1997 Molecular evolution of the Amy multigenes in the subgenus Sophophora of Drosophila Mol. Biol. Evol. 14 942 950
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 942-950
    • Inomata, N.1    Tachida, H.2    Yamazaki, T.3
  • 16
    • 0034035023 scopus 로고    scopus 로고
    • Evolution of nucleotide substitutions and gene regulation in the amylase multigenes in Drosophila kikkawai and its sibling species
    • N. Inomata T. Yamazaki 2000 Evolution of nucleotide substitutions and gene regulation in the amylase multigenes in Drosophila kikkawai and its sibling species Mol. Biol. Evol. 17 601 615
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 601-615
    • Inomata, N.1    Yamazaki, T.2
  • 17
    • 0031954284 scopus 로고    scopus 로고
    • Patterns of base composition within the genes of Drosophila melanogaster
    • R.M. Kliman A. Eyre-Walker 1998 Patterns of base composition within the genes of Drosophila melanogaster J. Mol. Evol. 46 534 541
    • (1998) J. Mol. Evol. , vol.46 , pp. 534-541
    • Kliman, R.M.1    Eyre-Walker, A.2
  • 19
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • 2
    • S. Kumar K. Tamura M. Nei 2004 MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment Brief Bioinform. 5 2 150 163
    • (2004) Brief Bioinform. , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 20
    • 0033637638 scopus 로고    scopus 로고
    • Testing the "proto-splice sites" model of intron origin: Evidence from analysis of intron phase correlation
    • M. Long C. Rosenberg 2000 Testing the "proto-splice sites" model of intron origin: evidence from analysis of intron phase correlation Mol. Biol. Evol. 17 1789 1796
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1789-1796
    • Long, M.1    Rosenberg, C.2
  • 21
    • 0000508541 scopus 로고
    • Phylogeny and classification of the Muscomorpha
    • Agriculture Canada Monograph Ottawa
    • J. [tmp] McAlpine 1989 Phylogeny and classification of the Muscomorpha M. Wood J. [tmp] McAlpine In Manual of Neartic Dipterain Agriculture Canada Monograph Ottawa 1397 1518
    • (1989) In Manual of Neartic Dipterain , pp. 1397-1518
    • McAlpine, J.1    Wood, M.2    McAlpine, J.3
  • 22
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • M. Nei T. Gojobori 1986 Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions Mol. Biol. Evol. 3 418 426
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 23
    • 0029000324 scopus 로고
    • Evidence for gene conversion in the amylase multigene family of Drosophila pseudoobscura
    • A. Popadic W.W. Anderson 1995 Evidence for gene conversion in the amylase multigene family of Drosophila pseudoobscura Mol. Biol. Evol. 12 564 572
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 564-572
    • Popadic, A.1    Anderson, W.W.2
  • 24
    • 0029943217 scopus 로고    scopus 로고
    • The evolutionary history of the amylase multigene family in Drosophila pseudoobscura
    • A. Popadic R.A. Norman W.W. Doane W.W. Anderson 1996 The evolutionary history of the amylase multigene family in Drosophila pseudoobscura Mol. Biol. Evol. 13 883 888
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 883-888
    • Popadic, A.1    Norman, R.A.2    Doane, W.W.3    Anderson, W.W.4
  • 25
    • 0037474545 scopus 로고    scopus 로고
    • Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase
    • N. Ramasubbu C. Ragunath P.J. Mishra 2003 Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase J. Mol. Biol. 325 1061 1076
    • (2003) J. Mol. Biol. , vol.325 , pp. 1061-1076
    • Ramasubbu, N.1    Ragunath, C.2    Mishra, P.J.3
  • 26
  • 27
    • 1842535132 scopus 로고    scopus 로고
    • Exon junction sequences as cryptic splice sites: Implication for intron origin
    • T. Sadusky A.J. Newman N.N. Dibb 2004 Exon junction sequences as cryptic splice sites: implication for intron origin Curr. Biol. 14 505 509
    • (2004) Curr. Biol. , vol.14 , pp. 505-509
    • Sadusky, T.1    Newman, A.J.2    Dibb, N.N.3
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou M. Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol. Biol. Evol. 4 406 425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 0346857920 scopus 로고    scopus 로고
    • Structure of the alpha-amylase genes in crustaceans and molluscs: Evolution of the exon/intron organization
    • D.Y. Sellos A. van Wormhoudt 2002 Structure of the alpha-amylase genes in crustaceans and molluscs: evolution of the exon/intron organization Biologia Bratislava. 57 191 196
    • (2002) Biologia Bratislava. , vol.57 , pp. 191-196
    • Sellos, D.Y.1    Van Wormhoudt, A.2
  • 30
    • 0024116811 scopus 로고
    • "silent" sites in Drosophila genes are not neutral: Evidence of selection among synonymous codons
    • D.C. Shields P.M. Sharp D.G. Higgins F. Wright 1988 "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons Mol. Biol. Evol. 5 704 716
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 704-716
    • Shields, D.C.1    Sharp, P.M.2    Higgins, D.G.3    Wright, F.4
  • 31
    • 2342473948 scopus 로고    scopus 로고
    • Molecular evolution: Introns fall into place
    • 9
    • A. Stoltzfus 2004 Molecular evolution: introns fall into place Curr. Biol. 14 9 R351 352
    • (2004) Curr. Biol. , vol.14 , pp. 351-352
    • Stoltzfus, A.1
  • 35
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • J.D. Thompson D.G. Higgins T.J. Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 4673 4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 36
    • 1542332885 scopus 로고    scopus 로고
    • Time flies, a new molecular time-scale for Brachyceran fly evolution without a clock
    • B.M. Wiegmann D.K. Yeates J.L. Thorne H. Kishino 2003 Time flies, a new molecular time-scale for Brachyceran fly evolution without a clock Syst. Biol. 52 745 756
    • (2003) Syst. Biol. , vol.52 , pp. 745-756
    • Wiegmann, B.M.1    Yeates, D.K.2    Thorne, J.L.3    Kishino, H.4
  • 37
    • 0032974846 scopus 로고    scopus 로고
    • Congruence and controversy: Toward a higher-level phylogeny of Diptera
    • D.K. Yeates B.M. Wiegmann 1999 Congruence and controversy: toward a higher-level phylogeny of Diptera Annu. Rev. Entomol. 44 397 428
    • (1999) Annu. Rev. Entomol. , vol.44 , pp. 397-428
    • Yeates, D.K.1    Wiegmann, B.M.2
  • 38
    • 0037309993 scopus 로고    scopus 로고
    • Phylogeny and evolution of the amylase multigenes in Drosophila montium species subgroup
    • Z. Zhang N. Inomata M.-L. Cariou J.-L. DaLage T. Yamazaki 2003a Phylogeny and evolution of the amylase multigenes in Drosophila montium species subgroup J. Mol. Evol. 56 121 130
    • (2003) J. Mol. Evol. , vol.56 , pp. 121-130
    • Zhang, Z.1    Inomata, N.2    Cariou, M.-L.3    Dalage, J.-L.4    Yamazaki, T.5
  • 39
    • 0346735285 scopus 로고    scopus 로고
    • Evolutionary history and mode of the amylase multigene family in Drosophila
    • Z. Zhang N. Inomata T. Yamazaki H. Kishino 2003b Evolutionary history and mode of the amylase multigene family in Drosophila J. Mol. Evol. 57 702 709
    • (2003) J. Mol. Evol. , vol.57 , pp. 702-709
    • Zhang, Z.1    Inomata, N.2    Yamazaki, T.3    Kishino, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.