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Volumn 102-103, Issue , 1998, Pages 49-60

Mutation pressure, natural selection, and the evolution of base composition in Drosophila

Author keywords

Base composition; Codon bias; Molecular evolution; Population genetics

Indexed keywords

CODON; DROSOPHILA MELANOGASTER; EVOLUTION; EXON; GENE SEQUENCING; INTRON; MUTATION; NATURAL SELECTION; POPULATION GENETICS;

EID: 7344242178     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-94-011-5210-5_5     Document Type: Article
Times cited : (67)

References (96)
  • 1
    • 0028220048 scopus 로고
    • Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy
    • Akashi, H., 1994. Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy. Genetics 136: 927-935.
    • (1994) Genetics , vol.136 , pp. 927-935
    • Akashi, H.1
  • 2
    • 0028797897 scopus 로고
    • Inferring weak selection from patterns of polymorphism and divergence at 'silent' sites in Drosophila DNA
    • Akashi, H., 1995. Inferring weak selection from patterns of polymorphism and divergence at 'silent' sites in Drosophila DNA. Genetics 139: 1067-1076.
    • (1995) Genetics , vol.139 , pp. 1067-1076
    • Akashi, H.1
  • 3
    • 0029985179 scopus 로고    scopus 로고
    • Molecular evolution between Drosophila melanogaster and D. simulans: Reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster
    • Akashi, H., 1996. Molecular evolution between Drosophila melanogaster and D. simulans: reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster. Genetics 144: 1297-1307.
    • (1996) Genetics , vol.144 , pp. 1297-1307
    • Akashi, H.1
  • 5
    • 0030903283 scopus 로고    scopus 로고
    • Natural selection and the frequency distributions of 'silent' DNA polymorphism in Drosophila
    • Akashi, H. & S.W. Schaeffer, 1997. Natural selection and the frequency distributions of 'silent' DNA polymorphism in Drosophila. Genetics 146: 295-307.
    • (1997) Genetics , vol.146 , pp. 295-307
    • Akashi, H.1    Schaeffer, S.W.2
  • 6
    • 0027263312 scopus 로고
    • Evolution of the Adh locus in the Drosophila willistoni group: The loss of an intron, and shift in codon usage
    • Anderson, C.L., E.A. Carew & J.R. Powell, 1993. Evolution of the Adh locus in the Drosophila willistoni group: the loss of an intron, and shift in codon usage. Mol. Biol. Evol. 10: 605-618.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 605-618
    • Anderson, C.L.1    Carew, E.A.2    Powell, J.R.3
  • 7
    • 0025297285 scopus 로고
    • Codon preferences in free-living microorganisms
    • Andersson, G.E. & C.G. Kurland, 1990. Codon preferences in free-living microorganisms. Microbiol. Rev. 54: 198-210.
    • (1990) Microbiol. Rev. , vol.54 , pp. 198-210
    • Andersson, G.E.1    Kurland, C.G.2
  • 8
    • 0003455528 scopus 로고
    • Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
    • Ashburner, M., 1989. Drosophila. A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
    • (1989) Drosophila. A Laboratory Manual
    • Ashburner, M.1
  • 9
    • 0028046414 scopus 로고
    • Unraveling selection in the mitochondrial genome of Drosophila
    • Ballard, J.W. & M. Kreitman, 1994. Unraveling selection in the mitochondrial genome of Drosophila. Genetics 138: 757-772.
    • (1994) Genetics , vol.138 , pp. 757-772
    • Ballard, J.W.1    Kreitman, M.2
  • 10
    • 0029040245 scopus 로고
    • Linkage and the limits to natural selection
    • Barton, N.H., 1995. Linkage and the limits to natural selection. Genetics 140: 821-841.
    • (1995) Genetics , vol.140 , pp. 821-841
    • Barton, N.H.1
  • 11
    • 0020024572 scopus 로고
    • Codon selection in yeast
    • Bennetzen, J.L. & B.D. Hall, 1982. Codon selection in yeast. J. Biol. Chem. 257: 3026-3031.
    • (1982) J. Biol. Chem. , vol.257 , pp. 3026-3031
    • Bennetzen, J.L.1    Hall, B.D.2
  • 12
    • 0029082357 scopus 로고
    • Synonymous substitution-rate constants in Escherichia coli and Salmonella typhimurium and their relationship to gene expression and selection pressure
    • Berg, O.G. & M. Martelius, 1995. Synonymous substitution-rate constants in Escherichia coli and Salmonella typhimurium and their relationship to gene expression and selection pressure. J. Mol. Evol. 41: 449-456.
    • (1995) J. Mol. Evol. , vol.41 , pp. 449-456
    • Berg, O.G.1    Martelius, M.2
  • 13
    • 0024805395 scopus 로고
    • The isochore organization of the human genome
    • Bernardi, G., 1989. The isochore organization of the human genome. Annu. Rev. Genet. 23: 637-661.
    • (1989) Annu. Rev. Genet. , vol.23 , pp. 637-661
    • Bernardi, G.1
  • 14
    • 0029587471 scopus 로고
    • The human genome: Organization and evolutionary history
    • Bernardi, G., 1995. The human genome: organization and evolutionary history. Annu. Rev. Genet. 29: 445-476.
    • (1995) Annu. Rev. Genet. , vol.29 , pp. 445-476
    • Bernardi, G.1
  • 15
    • 0022914759 scopus 로고
    • Compositional constraints and genome evolution
    • Bernardi, G. & G. Bernardi, 1986. Compositional constraints and genome evolution. J. Mol. Evol. 24: 1-11.
    • (1986) J. Mol. Evol. , vol.24 , pp. 1-11
    • Bernardi, G.1    Bernardi, G.2
  • 16
    • 0023803187 scopus 로고
    • Different base/base mispairs are corrected with different efficiencies and specificities in monkey kidney cells
    • Brown, T.C. & J. Jiricny, 1988. Different base/base mispairs are corrected with different efficiencies and specificities in monkey kidney cells. Cell 54: 705-711.
    • (1988) Cell , vol.54 , pp. 705-711
    • Brown, T.C.1    Jiricny, J.2
  • 17
    • 0027325512 scopus 로고
    • Intronic and 5′ flanking sequences of the Drosophila beta 3 tubulin gene are essential to confer ecdysone responsiveness
    • Bruhat, A., D. Dreau, M.E. Drake, S. Tourmente, S. Chapel, J.L. Couderc & B. Dastugue, 1993. Intronic and 5′ flanking sequences of the Drosophila beta 3 tubulin gene are essential to confer ecdysone responsiveness. Mol. Cell. Endocrinol. 94: 61-71.
    • (1993) Mol. Cell. Endocrinol. , vol.94 , pp. 61-71
    • Bruhat, A.1    Dreau, D.2    Drake, M.E.3    Tourmente, S.4    Chapel, S.5    Couderc, J.L.6    Dastugue, B.7
  • 18
    • 0023251888 scopus 로고
    • A statistical analysis of nucleotide sequences of introns and exons in human genes
    • Bulmer, M., 1987. A statistical analysis of nucleotide sequences of introns and exons in human genes. Mol. Biol. Evol. 4: 395-405.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 395-405
    • Bulmer, M.1
  • 19
    • 84993842127 scopus 로고
    • Are codon usage patterns in unicellular organisms determined by selection-mutation balance
    • Bulmer, M., 1988. Are codon usage patterns in unicellular organisms determined by selection-mutation balance. J. Evol. Biol. 1: 15-26.
    • (1988) J. Evol. Biol. , vol.1 , pp. 15-26
    • Bulmer, M.1
  • 20
    • 0025941139 scopus 로고
    • The selection-mutation-drift theory of synonymous codon usage
    • Bulmer, M., 1991. The selection-mutation-drift theory of synonymous codon usage. Genetics 129: 897-907.
    • (1991) Genetics , vol.129 , pp. 897-907
    • Bulmer, M.1
  • 21
    • 0027311934 scopus 로고
    • Compositional heterogeneity and patterns of molecular evolution in the Drosophila genome
    • Carulli, J.P., D.E. Krane, D.L. Hartl & H. Ochman, 1993. Compositional heterogeneity and patterns of molecular evolution in the Drosophila genome. Genetics 134: 837-845.
    • (1993) Genetics , vol.134 , pp. 837-845
    • Carulli, J.P.1    Krane, D.E.2    Hartl, D.L.3    Ochman, H.4
  • 22
    • 0029800853 scopus 로고    scopus 로고
    • Background selection and patterns of genetic diversity in Drosophila melanogaster
    • Charlesworth, B., 1996. Background selection and patterns of genetic diversity in Drosophila melanogaster. Genet. Res. 68: 131-149.
    • (1996) Genet. Res. , vol.68 , pp. 131-149
    • Charlesworth, B.1
  • 23
    • 0028863202 scopus 로고
    • The pattern of neutral molecular variation under the background selection model
    • Charlesworth, D., B. Charlesworth & M.T. Morgan, 1995. The pattern of neutral molecular variation under the background selection model. Genetics 141: 1619-1632.
    • (1995) Genetics , vol.141 , pp. 1619-1632
    • Charlesworth, D.1    Charlesworth, B.2    Morgan, M.T.3
  • 24
    • 0022271984 scopus 로고
    • The mitochondrial DNA molecular of Drosophila yakuba: Nucleotide sequence, gene organization, and genetic code
    • Clary, D.O. & D.R. Wolstenholme, 1985. The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code. J. Mol. Evol. 22: 252-271.
    • (1985) J. Mol. Evol. , vol.22 , pp. 252-271
    • Clary, D.O.1    Wolstenholme, D.R.2
  • 25
    • 0014378880 scopus 로고
    • The origin of the genetic code
    • Crick, F.H.C., 1968. The origin of the genetic code. J. Mol. Biol. 38: 367-379.
    • (1968) J. Mol. Biol. , vol.38 , pp. 367-379
    • Crick, F.H.C.1
  • 26
    • 0024962419 scopus 로고
    • Rates of aminoacyl-tRNA selection at 29 sense codons in vivo
    • Curran, J.F. & M. Yarus, 1989. Rates of aminoacyl-tRNA selection at 29 sense codons in vivo. J. Mol. Biol. 209: 65-77.
    • (1989) J. Mol. Biol. , vol.209 , pp. 65-77
    • Curran, J.F.1    Yarus, M.2
  • 27
    • 0028104077 scopus 로고
    • Selection on silent sites in the rodent H3 histone gene family
    • DeBry, R.W. & W.F. Marzluff, 1994. Selection on silent sites in the rodent H3 histone gene family. Genetics 138: 191-202.
    • (1994) Genetics , vol.138 , pp. 191-202
    • DeBry, R.W.1    Marzluff, W.F.2
  • 28
    • 0029051398 scopus 로고
    • Correlation of GC content with replication timing and repair mechanisms in weakly expressed E. coli genes
    • Deschavanne, P. & J. Filipski, 1995. Correlation of GC content with replication timing and repair mechanisms in weakly expressed E. coli genes. Nucleic Acids Res. 23: 1350-1353.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1350-1353
    • Deschavanne, P.1    Filipski, J.2
  • 29
    • 0027183991 scopus 로고
    • Recombination and mammalian genome evolution
    • Eyre-Walker, A., 1993. Recombination and mammalian genome evolution. Proc. R. Soc. Lond. B. Biol. Sci. 252: 237-243.
    • (1993) Proc. R. Soc. Lond. B. Biol. Sci. , vol.252 , pp. 237-243
    • Eyre-Walker, A.1
  • 30
    • 0029878715 scopus 로고    scopus 로고
    • The close proximity of Escherichia coli genes: Consequences for stop codon and synonymous codon use
    • Eyre-Walker, A., 1996. The close proximity of Escherichia coli genes: consequences for stop codon and synonymous codon use. J. Mol. Evol. 42: 73-78.
    • (1996) J. Mol. Evol. , vol.42 , pp. 73-78
    • Eyre-Walker, A.1
  • 31
    • 0031303811 scopus 로고    scopus 로고
    • Differentiating between selection and mutation bias
    • Eyre-Walker, A., 1997. Differentiating between selection and mutation bias. [letter] Genetics 147: 1983-1987.
    • (1997) Genetics , vol.147 , pp. 1983-1987
    • Eyre-Walker, A.1
  • 32
    • 0029027991 scopus 로고
    • Synonymous substitution rates in enterobacteria
    • Eyre-Walker, A. & M. Bulmer, 1995. Synonymous substitution rates in enterobacteria. Genetics 140: 1407-1412.
    • (1995) Genetics , vol.140 , pp. 1407-1412
    • Eyre-Walker, A.1    Bulmer, M.2
  • 33
    • 0016110957 scopus 로고
    • The evolutionary advantage of recombination
    • Felsenstein, J., 1974. The evolutionary advantage of recombination. Genetics 78: 737-756.
    • (1974) Genetics , vol.78 , pp. 737-756
    • Felsenstein, J.1
  • 34
    • 0023192595 scopus 로고
    • Correlation between molecular clock ticking, codon usage fidelity of DNA repair, chromosome banding and chromatin compactness in germline cells
    • Filipski, J., 1987. Correlation between molecular clock ticking, codon usage fidelity of DNA repair, chromosome banding and chromatin compactness in germline cells. FEBS Lett. 217: 184-186.
    • (1987) FEBS Lett. , vol.217 , pp. 184-186
    • Filipski, J.1
  • 36
    • 0002690901 scopus 로고
    • On the evolution of base composition of DNA
    • Freese, E., 1962. On the evolution of base composition of DNA. J. Theor. Biol. 3: 82-101.
    • (1962) J. Theor. Biol. , vol.3 , pp. 82-101
    • Freese, E.1
  • 37
    • 0020491327 scopus 로고
    • Codon usage in bacteria: Correlation with gene expressivity
    • Gouy, M. & C. Gautier, 1982. Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Res. 10: 7055-7074.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 7055-7074
    • Gouy, M.1    Gautier, C.2
  • 38
    • 0020363515 scopus 로고
    • Preferential codon usage in prokaryotic genes, the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes
    • Grosjean, H. & W. Fiers, 1982. Preferential codon usage in prokaryotic genes, the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes. Gene 18: 199-209.
    • (1982) Gene , vol.18 , pp. 199-209
    • Grosjean, H.1    Fiers, W.2
  • 39
    • 0030467254 scopus 로고    scopus 로고
    • Intron of the mouse Hoxa-7 gene contains conserved homeodomain binding sites that can function as an enhancer element in Drosophila
    • Haerry, T.E. &W.J. Gehring, 1996. Intron of the mouse Hoxa-7 gene contains conserved homeodomain binding sites that can function as an enhancer element in Drosophila. Proc. Natl. Acad. Sci. USA 93: 13884-13889.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 13884-13889
    • Haerry, T.E.1    Gehring, W.J.2
  • 41
    • 0002426158 scopus 로고
    • Gene duplication, gene conversion, and codon bias
    • edited by B. Golding. Chapman & Hall, New York
    • Hickey, D.A., S. Wang & C. Magoulas, 1994. Gene duplication, gene conversion, and codon bias, pp. 199-207. In Non-Neutral Evolution: Theories and Molecular Data, edited by B. Golding. Chapman & Hall, New York.
    • (1994) Non-Neutral Evolution: Theories and Molecular Data , pp. 199-207
    • Hickey, D.A.1    Wang, S.2    Magoulas, C.3
  • 42
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill, W.G. & A. Robertson, 1966. The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
    • (1966) Genet. Res. , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 43
    • 0008113580 scopus 로고
    • Genetic analysis of intragenic recombination in Drosophila
    • edited by K.B. Low. Academic Press, San Diego
    • Hilliker, A. F., S. H. Clark & A. Chovnick, 1988. Genetic analysis of intragenic recombination in Drosophila, pp. 73-90. In The Recombination of Genetic Material, edited by K.B. Low. Academic Press, San Diego.
    • (1988) The Recombination of Genetic Material , pp. 73-90
    • Hilliker, A.F.1    Clark, S.H.2    Chovnick, A.3
  • 44
    • 0026890665 scopus 로고
    • Chromosome bands, their chromatin flavors, and their functional features
    • Holmquist, G.P., 1992 Chromosome bands, their chromatin flavors, and their functional features. Am. J. Hum. Genet. 51: 17-37.
    • (1992) Am. J. Hum. Genet. , vol.51 , pp. 17-37
    • Holmquist, G.P.1
  • 45
    • 0027189976 scopus 로고
    • The interplay between multiple enhancer and silencer elements defines the pattern of decapentaplegic expression
    • Huang, J.D., D.H. Schwyter, J.M. Shirokawa & A.J. Courey, 1993. The interplay between multiple enhancer and silencer elements defines the pattern of decapentaplegic expression. Genes Dev. 7: 694-704.
    • (1993) Genes Dev. , vol.7 , pp. 694-704
    • Huang, J.D.1    Schwyter, D.H.2    Shirokawa, J.M.3    Courey, A.J.4
  • 46
    • 0028215929 scopus 로고
    • Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster
    • Hudson, R.R., K. Bailey, D. Skarecky, J. Kwiatowski & F.J. Ayala, 1994. Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster. Genetics 136: 1329-1340.
    • (1994) Genetics , vol.136 , pp. 1329-1340
    • Hudson, R.R.1    Bailey, K.2    Skarecky, D.3    Kwiatowski, J.4    Ayala, F.J.5
  • 47
    • 0019824131 scopus 로고
    • Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
    • Ikemura, T., 1981. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. J. Mol. Biol. 151: 389-409.
    • (1981) J. Mol. Biol. , vol.151 , pp. 389-409
    • Ikemura, T.1
  • 48
    • 0019949369 scopus 로고
    • Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs
    • Ikemura, T., 1982. Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs. J. Mol. Biol. 158: 573-597.
    • (1982) J. Mol. Biol. , vol.158 , pp. 573-597
    • Ikemura, T.1
  • 49
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura, T., 1985. Codon usage and tRNA content in unicellular and multicellular organisms. Mol. Biol. Evol. 2: 13-34.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 50
    • 0029069562 scopus 로고
    • A functional analysis of 5′, intronic and promoter regions of the homeotic gene proboscipedia in Drosophila melanogaster
    • Kapoun, A.M. & T.C. Kaufman, 1995. A functional analysis of 5′, intronic and promoter regions of the homeotic gene proboscipedia in Drosophila melanogaster. Development 121: 2127-2141.
    • (1995) Development , vol.121 , pp. 2127-2141
    • Kapoun, A.M.1    Kaufman, T.C.2
  • 52
    • 0015220547 scopus 로고
    • Protein polymorphism as a phase of molecular evolution
    • Kimura, M. & T. Ohta, 1971. Protein polymorphism as a phase of molecular evolution. Nature, Lond. 229: 467-469.
    • (1971) Nature, Lond. , vol.229 , pp. 467-469
    • Kimura, M.1    Ohta, T.2
  • 53
    • 0029026878 scopus 로고
    • Maintenance of pre-mRNA secondary structure by epistatic selection
    • Kirby, D.A., S.V. Muse & W. Stephan, 1995. Maintenance of pre-mRNA secondary structure by epistatic selection. Proc. Natl. Acad. Sci. USA 92: 9047-9051.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 9047-9051
    • Kirby, D.A.1    Muse, S.V.2    Stephan, W.3
  • 54
    • 0027383354 scopus 로고
    • Reduced natural selection associated with low recombination in Drosophila melanogaster
    • Kliman, R.M. & J. Hey, 1993. Reduced natural selection associated with low recombination in Drosophila melanogaster. Mol. Biol. Evol. 10: 1239-1258.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 1239-1258
    • Kliman, R.M.1    Hey, J.2
  • 55
    • 0028040734 scopus 로고
    • The effects of mutation and natural selection on codon bias in the genes of Drosophila
    • Kliman, R.M. & J. Hey, 1994. The effects of mutation and natural selection on codon bias in the genes of Drosophila. Genetics 137: 1049-1056.
    • (1994) Genetics , vol.137 , pp. 1049-1056
    • Kliman, R.M.1    Hey, J.2
  • 56
    • 0029882315 scopus 로고    scopus 로고
    • Related enhancers in the intron of the betal tubulin gene of Drosophila melanogaster are essential for maternal and CNS-specific expression during embryogenesis
    • Kohler, J., S. Schafer-Preuss & D. Buttgereit, 1996. Related enhancers in the intron of the betal tubulin gene of Drosophila melanogaster are essential for maternal and CNS-specific expression during embryogenesis. Nucleic Acids Res. 24: 2543-2550.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 2543-2550
    • Kohler, J.1    Schafer-Preuss, S.2    Buttgereit, D.3
  • 57
    • 0028031431 scopus 로고
    • The effect of an intronic polymorphism on alcohol dehydrogenase expression in Drosophila melanogaster
    • Laurie, C.C. & L.F. Stam, 1994. The effect of an intronic polymorphism on alcohol dehydrogenase expression in Drosophila melanogaster. Genetics 138: 379-385.
    • (1994) Genetics , vol.138 , pp. 379-385
    • Laurie, C.C.1    Stam, L.F.2
  • 58
    • 0028799521 scopus 로고
    • Constraints on intron evolution in the gene encoding the myosin alkali light chain in Drosophila
    • Leicht. B.G., S.V. Muse, M. Hanczyc & A.G. Clark, 1995. Constraints on intron evolution in the gene encoding the myosin alkali light chain in Drosophila. Genetics 139: 299-308.
    • (1995) Genetics , vol.139 , pp. 299-308
    • Leicht, B.G.1    Muse, S.V.2    Hanczyc, M.3    Clark, A.G.4
  • 59
    • 0023064998 scopus 로고
    • Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons
    • Li, W.H., 1987. Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons. J. Mol. Evol. 24: 337-345.
    • (1987) J. Mol. Evol. , vol.24 , pp. 337-345
    • Li, W.H.1
  • 60
    • 15844423271 scopus 로고    scopus 로고
    • Site-specific codon bias in bacteria
    • Maynard Smith, J. & N.H. Smith, 1996. Site-specific codon bias in bacteria. Genetics 142: 1037-1043.
    • (1996) Genetics , vol.142 , pp. 1037-1043
    • Maynard Smith, J.1    Smith, N.H.2
  • 61
    • 0027483908 scopus 로고
    • AU-rich intronic elements affect pre-mRNA 5′ splice site selection in Drosophila melanogaster
    • McCullough, A.J. & M.A. Schuler, 1993. AU-rich intronic elements affect pre-mRNA 5′ splice site selection in Drosophila melanogaster. Mol. Cell. Biol. 13: 7689-7697.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 7689-7697
    • McCullough, A.J.1    Schuler, M.A.2
  • 62
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald, J.H. & M. Kreitman, 1991. Adaptive protein evolution at the Adh locus in Drosophila [see comments]. Nature 351: 652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 63
    • 0029832545 scopus 로고    scopus 로고
    • The two small introns of the Drosophila affinidisjuncta Adh gene are required for normal transcription
    • McKenzie, R.W. & M.D. Brennan, 1996. The two small introns of the Drosophila affinidisjuncta Adh gene are required for normal transcription. Nucleic Acids Res. 24: 3635-3642.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3635-3642
    • McKenzie, R.W.1    Brennan, M.D.2
  • 64
    • 0026725308 scopus 로고
    • Rates of synonymous substitution and base composition of nuclear genes in Drosophila
    • Moriyama, E.N. & T. Gojobori, 1992. Rates of synonymous substitution and base composition of nuclear genes in Drosophila. Genetics 130: 855-864.
    • (1992) Genetics , vol.130 , pp. 855-864
    • Moriyama, E.N.1    Gojobori, T.2
  • 65
    • 0027153966 scopus 로고
    • Codon usage bias and base composition of nuclear genes in Drosophila
    • Moriyama, E.N. & D.L. Hartl, 1993. Codon usage bias and base composition of nuclear genes in Drosophila. Genetics 134: 847-858.
    • (1993) Genetics , vol.134 , pp. 847-858
    • Moriyama, E.N.1    Hartl, D.L.2
  • 66
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila: Intron size, information content, and consensus sequences
    • Mount, S.M., C. Burks, G. Hertz, G.D. Stormo, O. White & C. Fields, 1992. Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Res. 20: 4255-4262.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4255-4262
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 67
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • Muller, H.J., 1964. The relation of recombination to mutational advance. Mutation Research 1: 2-9.
    • (1964) Mutation Research , vol.1 , pp. 2-9
    • Muller, H.J.1
  • 68
    • 0021077332 scopus 로고
    • Evolution of a finite population under gene conversion
    • Nagylaki, T., 1983. Evolution of a finite population under gene conversion. Proc. Natl. Acad. Sci. USA 80: 6278-6281.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 6278-6281
    • Nagylaki, T.1
  • 69
    • 0028273998 scopus 로고
    • Polarity of meiotic gene conversion in fungi: Contrasting views
    • Nicolas, A. & T.D. Petes, 1994. Polarity of meiotic gene conversion in fungi: contrasting views. Experimentia 50: 242-252.
    • (1994) Experimentia , vol.50 , pp. 242-252
    • Nicolas, A.1    Petes, T.D.2
  • 70
    • 0027510930 scopus 로고
    • Rates of DNA evolution in Drosophila depend on function and developmental stage of expression
    • Powell, J.R., A. Caccone, J.M. Gleason & L. Nigro, 1993. Rates of DNA evolution in Drosophila depend on function and developmental stage of expression. Genetics 133: 291-298.
    • (1993) Genetics , vol.133 , pp. 291-298
    • Powell, J.R.1    Caccone, A.2    Gleason, J.M.3    Nigro, L.4
  • 71
    • 0027942996 scopus 로고
    • Neutral and nonneutral evolution of Drosophila mitochondrial DNA
    • Rand, D.M., M. Dorfsman & L.M. Kann, 1994. Neutral and nonneutral evolution of Drosophila mitochondrial DNA. Genetics 138: 741-756.
    • (1994) Genetics , vol.138 , pp. 741-756
    • Rand, D.M.1    Dorfsman, M.2    Kann, L.M.3
  • 72
    • 0023413802 scopus 로고
    • Confidence interval for the number of selectively neutral amino acid polymorphisms
    • Sawyer, S.A., D.E. Dykhuizen & D.L. Hartl, 1987. Confidence interval for the number of selectively neutral amino acid polymorphisms. Proc. Natl. Acad. Sci. USA 84: 6225-6228.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 6225-6228
    • Sawyer, S.A.1    Dykhuizen, D.E.2    Hartl, D.L.3
  • 73
    • 0026460082 scopus 로고
    • Population genetics of polymorphism and divergence
    • Sawyer, S.A. & D.L. Hartl, 1992. Population genetics of polymorphism and divergence. Genetics 132: 1161-1176.
    • (1992) Genetics , vol.132 , pp. 1161-1176
    • Sawyer, S.A.1    Hartl, D.L.2
  • 74
    • 0027484771 scopus 로고
    • Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura
    • Schaeffer, S.W. & E.L. Miller, 1993. Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura. Genetics 135: 541-552.
    • (1993) Genetics , vol.135 , pp. 541-552
    • Schaeffer, S.W.1    Miller, E.L.2
  • 75
    • 0007626797 scopus 로고
    • Distribution of purine and pyrimidines in deoxyribonucleic acids
    • edited by G.D. Fasman. CRC Press, Cleveland
    • Shapiro, H.S., 1976. Distribution of purine and pyrimidines in deoxyribonucleic acids, pp. 241-281. In CRC Handbook of Biochemistry and Molecular Biology, edited by G.D. Fasman. CRC Press, Cleveland.
    • (1976) CRC Handbook of Biochemistry and Molecular Biology , pp. 241-281
    • Shapiro, H.S.1
  • 77
    • 0025988205 scopus 로고
    • Synonymous codon usage in Saccharomyces cerevisiae
    • Sharp, P.M. & E. Cowe, 1991. Synonymous codon usage in Saccharomyces cerevisiae. Yeast 7: 657-678.
    • (1991) Yeast , vol.7 , pp. 657-678
    • Sharp, P.M.1    Cowe, E.2
  • 78
    • 0022856787 scopus 로고
    • An evolutionary perspective on synonymous codon usage in unicellular organisms
    • Sharp, P.M. & W.H. Li, 1986. An evolutionary perspective on synonymous codon usage in unicellular organisms. J. Mol. Evol. 24: 28-38.
    • (1986) J. Mol. Evol. , vol.24 , pp. 28-38
    • Sharp, P.M.1    Li, W.H.2
  • 79
    • 0023274170 scopus 로고
    • The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias
    • Sharp, P.M. & W.H. Li, 1987. The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias. Mol. Biol. Evol. 4: 222-230.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 222-230
    • Sharp, P.M.1    Li, W.H.2
  • 80
    • 0024591558 scopus 로고
    • On the rate of DNA sequence evolution in Drosophila
    • Sharp, P.M. & W.H. Li, 1989. On the rate of DNA sequence evolution in Drosophila. J. Mol. Evol. 28: 398-402.
    • (1989) J. Mol. Evol. , vol.28 , pp. 398-402
    • Sharp, P.M.1    Li, W.H.2
  • 81
    • 0027161465 scopus 로고
    • Regional base composition variation along yeast chromosome III: Evolution of chromosome primary structure
    • Sharp, P.M. & A.T. Lloyd, 1993. Regional base composition variation along yeast chromosome III: evolution of chromosome primary structure. Nucleic Acids Res. 21: 179-183.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 179-183
    • Sharp, P.M.1    Lloyd, A.T.2
  • 82
    • 0027715731 scopus 로고
    • Codon usage: Mutational bias, transiational selection, or both?
    • Sharp, P.M., M. Stenico, J.F. Peden & A.T. Lloyd, 1993. Codon usage: mutational bias, transiational selection, or both? Biochem. Soc. Trans. 21: 835-841.
    • (1993) Biochem. Soc. Trans. , vol.21 , pp. 835-841
    • Sharp, P.M.1    Stenico, M.2    Peden, J.F.3    Lloyd, A.T.4
  • 83
    • 0029154609 scopus 로고
    • Molecular evolution of the duplicated Amy locus in the Drosophila melanogaster species subgroup: Concerted evolution only in the coding region and an excess of nonsynonymous substitutions in speciation
    • Shibata, H. & T. Yamazaki, 1995. Molecular evolution of the duplicated Amy locus in the Drosophila melanogaster species subgroup: concerted evolution only in the coding region and an excess of nonsynonymous substitutions in speciation. Genetics 141: 223-236.
    • (1995) Genetics , vol.141 , pp. 223-236
    • Shibata, H.1    Yamazaki, T.2
  • 84
    • 0024116811 scopus 로고
    • 'Silent' sites in Drosophila genes are not neutral: Evidence of selection among synonymous codons
    • Shields, D.C., P.M. Sharp, D.G. Higgins & F. Wright, 1988. 'Silent' sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Mol. Biol. Evol. 5: 704-716.
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 704-716
    • Shields, D.C.1    Sharp, P.M.2    Higgins, D.G.3    Wright, F.4
  • 86
    • 0027164566 scopus 로고
    • RNA folding in Drosophila shows a distance effect for compensatory fitness interactions
    • Stephan, W. & D.A. Kirby, 1993. RNA folding in Drosophila shows a distance effect for compensatory fitness interactions. Genetics 135: 97-103.
    • (1993) Genetics , vol.135 , pp. 97-103
    • Stephan, W.1    Kirby, D.A.2
  • 87
    • 3643052747 scopus 로고
    • On the genetic basis of variation and heterogeneity of DNA base composition
    • Sueoka, N., 1962. On the genetic basis of variation and heterogeneity of DNA base composition. Proc. Natl. Acad Sci. USA 48: 582-592.
    • (1962) Proc. Natl. Acad Sci. USA , vol.48 , pp. 582-592
    • Sueoka, N.1
  • 88
    • 0023991945 scopus 로고
    • Directional mutation pressure and neutral molecular evolution
    • Sueoka, N., 1988. Directional mutation pressure and neutral molecular evolution. Proc. Natl. Acad. Sci. USA 85: 2653-2657.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2653-2657
    • Sueoka, N.1
  • 89
    • 0025910410 scopus 로고
    • The molecular evolution of the alcohol dehydrogenase locus and the phylogeny of Hawaiian Drosophila
    • Thomas, R.H. & J.A. Hunt, 1991. The molecular evolution of the alcohol dehydrogenase locus and the phylogeny of Hawaiian Drosophila. Mol. Biol. Evol. 8: 687-702.
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 687-702
    • Thomas, R.H.1    Hunt, J.A.2
  • 90
    • 0027357257 scopus 로고
    • Enhancer and silencer elements within the first intron mediate the transcriptional regulation of the beta 3 tubulin gene by 20-hydroxyecdysone in Drosophila Kc cells
    • Tourmente, S., S. Chapel, D. Dreau, M.E. Drake, A. Bruhat, J.L. Couderc & B. Dastugue, 1993. Enhancer and silencer elements within the first intron mediate the transcriptional regulation of the beta 3 tubulin gene by 20-hydroxyecdysone in Drosophila Kc cells. Insect Biochem. Mol. Biol. 23: 137-143.
    • (1993) Insect Biochem. Mol. Biol. , vol.23 , pp. 137-143
    • Tourmente, S.1    Chapel, S.2    Dreau, D.3    Drake, M.E.4    Bruhat, A.5    Couderc, J.L.6    Dastugue, B.7
  • 91
    • 0030068317 scopus 로고    scopus 로고
    • Differences in crossover frequency and distribution among three sibling species of Drosophila
    • True, J.R., J.M. Mercer & C.C. Laurie, 1996. Differences in crossover frequency and distribution among three sibling species of Drosophila. Genetics 142: 507-523.
    • (1996) Genetics , vol.142 , pp. 507-523
    • True, J.R.1    Mercer, J.M.2    Laurie, C.C.3
  • 92
    • 0021764898 scopus 로고
    • Translation is a non-uniform process: Effect of tRNA availability on the rate of elongation of nascent polypeptide chains
    • Varenne, S., J. Buc, R. Lloubes & C. Lazdunski, 1984. Translation is a non-uniform process: effect of tRNA availability on the rate of elongation of nascent polypeptide chains. J. Biol. Chem. 180: 549-576.
    • (1984) J. Biol. Chem. , vol.180 , pp. 549-576
    • Varenne, S.1    Buc, J.2    Lloubes, R.3    Lazdunski, C.4
  • 93
    • 0015787150 scopus 로고
    • Analysis of tRNAs during the development of Drosophila
    • White, B.N., G.M. Tener, J. Holden & D.T. Suzuki, 1973. Analysis of tRNAs during the development of Drosophila. Dev. Biol. 33: 185-195.
    • (1973) Dev. Biol. , vol.33 , pp. 185-195
    • White, B.N.1    Tener, G.M.2    Holden, J.3    Suzuki, D.T.4
  • 94
    • 0024497416 scopus 로고
    • Mutation rates differ among regions of the mammalian genome
    • Wolfe, K.H., P.M. Sharp & W.H. Li, 1989. Mutation rates differ among regions of the mammalian genome. Nature, London 337: 283-285.
    • (1989) Nature, London , vol.337 , pp. 283-285
    • Wolfe, K.H.1    Sharp, P.M.2    Li, W.H.3
  • 95
    • 0025318864 scopus 로고
    • The "effective number of codons" used in a gene
    • Wright, F., 1990. The "effective number of codons" used in a gene. Gene 87: 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 96
    • 0001111819 scopus 로고
    • The distribution of gene frequencies under irreversible mutation
    • Wright, S., 1938. The distribution of gene frequencies under irreversible mutation. Proc. Natl. Acad. Sci. USA 24: 253-259.
    • (1938) Proc. Natl. Acad. Sci. USA , vol.24 , pp. 253-259
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.