-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
2
-
-
0035849451
-
The 5′ boundary of the human apolipoprotein B chromatin domain in intestinal cells
-
Antes TJ, Namciu SJ, Fournier RE, Levy-Wilson B (2001) The 5′ boundary of the human apolipoprotein B chromatin domain in intestinal cells. Biochemistry 40, 6731-6742
-
(2001)
Biochemistry
, vol.40
, pp. 6731-6742
-
-
Antes, T.J.1
Namciu, S.J.2
Fournier, R.E.3
Levy-Wilson, B.4
-
3
-
-
0343526377
-
The insulator protein CTCF represses transcription on binding to the (gt)(22)(ga)(15) microsatellite in intron 2 of the HLA-DRB1(*)0401 gene
-
Arnold R, Maueler W, Bassili G, Lutz M, Burke L, et al. (2000) The insulator protein CTCF represses transcription on binding to the (gt)(22)(ga)(15) microsatellite in intron 2 of the HLA-DRB1(*)0401 gene. Gene 253, 209-214
-
(2000)
Gene
, vol.253
, pp. 209-214
-
-
Arnold, R.1
Maueler, W.2
Bassili, G.3
Lutz, M.4
Burke, L.5
-
4
-
-
0033118880
-
Stopped at the border: Boundaries and insulators
-
Bell AC, Felsenfeld G (1999) Stopped at the border: boundaries and insulators. Curr Opin Genet Dev 9, 191-198
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 191-198
-
-
Bell, A.C.1
Felsenfeld, G.2
-
5
-
-
0033529654
-
The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
-
Bell AC, West AG, Felsenfeld G (1999) The protein CTCF is required for the enhancer blocking activity of vertebrate insulators. Cell 98, 387-396
-
(1999)
Cell
, vol.98
, pp. 387-396
-
-
Bell, A.C.1
West, A.G.2
Felsenfeld, G.3
-
6
-
-
0035910395
-
Insulators and boundaries: Versatile regulatory elements in the eukaryotic genome
-
Bell AC, West AG, Felsenfeld G (2001) Insulators and boundaries: versatile regulatory elements in the eukaryotic genome. Science 291, 447-450
-
(2001)
Science
, vol.291
, pp. 447-450
-
-
Bell, A.C.1
West, A.G.2
Felsenfeld, G.3
-
7
-
-
0033790710
-
The transgeneticist's toolbox: Novel methods for the targeted modification of eukaryotic genomes
-
Bode J, Schlake T, Iber M, Schubeler D, Seibler J, et al. (2000) The transgeneticist's toolbox: novel methods for the targeted modification of eukaryotic genomes. Biol Chem 381, 801-813
-
(2000)
Biol Chem
, vol.381
, pp. 801-813
-
-
Bode, J.1
Schlake, T.2
Iber, M.3
Schubeler, D.4
Seibler, J.5
-
8
-
-
36148982566
-
Architecture and utilization of highly-expressed genomic sites
-
Makrides S, ed. (Amsterdam: Elsevier)
-
Bode J, Goetze S, Ernst E, Huesemann Y, Baer A, et al. (2003) Architecture and utilization of highly-expressed genomic sites. In: Gene Transfer and Expression in Mammalian Cells, Makrides S, ed. (Amsterdam: Elsevier) pp 551-572
-
(2003)
Gene Transfer and Expression in Mammalian Cells
, pp. 551-572
-
-
Bode, J.1
Goetze, S.2
Ernst, E.3
Huesemann, Y.4
Baer, A.5
-
9
-
-
0025145628
-
Tissue specific and position independent expression of the complete gene domain for chicken lysozyme in transgenic mice
-
Bonifer C, Vidal M, Grosveld F, Sippel AE (1990) Tissue specific and position independent expression of the complete gene domain for chicken lysozyme in transgenic mice. EMBO J 9, 2843-2848
-
(1990)
EMBO J
, vol.9
, pp. 2843-2848
-
-
Bonifer, C.1
Vidal, M.2
Grosveld, F.3
Sippel, A.E.4
-
10
-
-
0039205029
-
Targeting of an inducible toxic phenotype in animal cells
-
Borrelli E, Heyman R, Hsi M, Evans RM (1988) Targeting of an inducible toxic phenotype in animal cells. Proc Natl Acad Sci USA 85, 7572-7576
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 7572-7576
-
-
Borrelli, E.1
Heyman, R.2
Hsi, M.3
Evans, R.M.4
-
11
-
-
0021876965
-
Characterization of a "silencer" in yeast: A DNA sequence with properties opposite to those of a transcriptional enhancer
-
Brand AH, Breeden L, Abraham J, Sternglanz R, Nasmyth K (1985) Characterization of a "silencer" in yeast: a DNA sequence with properties opposite to those of a transcriptional enhancer. Cell 41, 41-48
-
(1985)
Cell
, vol.41
, pp. 41-48
-
-
Brand, A.H.1
Breeden, L.2
Abraham, J.3
Sternglanz, R.4
Nasmyth, K.5
-
12
-
-
0038363378
-
The orphan G protein-coupled receptors GPR41 and GPR43 are activated by propionate and other short chain carboxylic acids
-
Brown AJ, Goldsworthy SM, Barnes AA, Eilert MM, Tcheang L, et al. (2003) The orphan G protein-coupled receptors GPR41 and GPR43 are activated by propionate and other short chain carboxylic acids. J Biol Chem 278, 11312-11319
-
(2003)
J Biol Chem
, vol.278
, pp. 11312-11319
-
-
Brown, A.J.1
Goldsworthy, S.M.2
Barnes, A.A.3
Eilert, M.M.4
Tcheang, L.5
-
13
-
-
0035702661
-
Identification and mapping of nuclear matrix-attachment regions in a one megabase locus of human chromosome 19q13.12: Long-range correlation of S/MARs and gene positions
-
Chernov IP, Akopov SB, Nikolaev LG, Sverdlov ED (2002) Identification and mapping of nuclear matrix-attachment regions in a one megabase locus of human chromosome 19q13.12: long-range correlation of S/MARs and gene positions. J Cell Biochem 84, 590-600
-
(2002)
J Cell Biochem
, vol.84
, pp. 590-600
-
-
Chernov, I.P.1
Akopov, S.B.2
Nikolaev, L.G.3
Sverdlov, E.D.4
-
14
-
-
2942625614
-
Structure and function of nuclear matrix associated regions (S/MARs)
-
Chernov IP, Akopov SB, Nikolaev LG (2004) Structure and function of nuclear matrix associated regions (S/MARs). Bioorg Khim 30, 3-14
-
(2004)
Bioorg Khim
, vol.30
, pp. 3-14
-
-
Chernov, I.P.1
Akopov, S.B.2
Nikolaev, L.G.3
-
15
-
-
0027254748
-
A 5′ element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila
-
Chung JH, Whiteley M, Felsenfeld G (1993) A 5′ element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila. Cell 74, 505-514
-
(1993)
Cell
, vol.74
, pp. 505-514
-
-
Chung, J.H.1
Whiteley, M.2
Felsenfeld, G.3
-
16
-
-
0042880630
-
Spatial organization of gene expression: The active chromatin hub
-
de Laat W, Grosveld F (2003) Spatial organization of gene expression: the active chromatin hub. Chromosome Res 11, 447-459
-
(2003)
Chromosome Res
, vol.11
, pp. 447-459
-
-
De Laat, W.1
Grosveld, F.2
-
17
-
-
0037105522
-
Development of virus vectors for gene therapy of beta chain hemoglobinopathies: Flanking with a chromatin insulator reduces gamma-globin gene silencing in vivo
-
Emery DW, Yannaki E, Tubb J, Nishino T, Li Q, et al. (2002) Development of virus vectors for gene therapy of beta chain hemoglobinopathies: flanking with a chromatin insulator reduces gamma-globin gene silencing in vivo. Blood 100, 2012-2019
-
(2002)
Blood
, vol.100
, pp. 2012-2019
-
-
Emery, D.W.1
Yannaki, E.2
Tubb, J.3
Nishino, T.4
Li, Q.5
-
18
-
-
0029929793
-
An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes
-
Filippova GN, Fagerlie S, Klenova EM, Myers C, Dehner Y, et al. (1996) An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes. Mol Cell Biol 16, 2802-2813
-
(1996)
Mol Cell Biol
, vol.16
, pp. 2802-2813
-
-
Filippova, G.N.1
Fagerlie, S.2
Klenova, E.M.3
Myers, C.4
Dehner, Y.5
-
19
-
-
14844342575
-
Performance of genomic bordering elements at predefined genomic loci
-
Goetze S, Baer A, Winkelmann S, Nehlsen K, Seibler J, et al. (2005) Performance of genomic bordering elements at predefined genomic loci. Mol Cell Biol 25, 2260-2272
-
(2005)
Mol Cell Biol
, vol.25
, pp. 2260-2272
-
-
Goetze, S.1
Baer, A.2
Winkelmann, S.3
Nehlsen, K.4
Seibler, J.5
-
20
-
-
0034860007
-
Re-defining the chromatin loop domain
-
Heng HH, Krawetz SA, Lu W, Bremer S, Liu G, et al. (2001) Re-defining the chromatin loop domain. Cytogenet Cell Genet 93, 155-161
-
(2001)
Cytogenet Cell Genet
, vol.93
, pp. 155-161
-
-
Heng, H.H.1
Krawetz, S.A.2
Lu, W.3
Bremer, S.4
Liu, G.5
-
21
-
-
8644286276
-
Evolutionary impact of human Alu repetitive elements
-
Jurka J (2004) Evolutionary impact of human Alu repetitive elements. Curr Opin Genet Dev 14, 603-608
-
(2004)
Curr Opin Genet Dev
, vol.14
, pp. 603-608
-
-
Jurka, J.1
-
22
-
-
0028988485
-
Position-independent transgene expression mediated by boundary elements from the apolipoprotein B chromatin domain
-
Kalos M, Fournier RE (1995) Position-independent transgene expression mediated by boundary elements from the apolipoprotein B chromatin domain. Mol Cell Biol 15, 198-207
-
(1995)
Mol Cell Biol
, vol.15
, pp. 198-207
-
-
Kalos, M.1
Fournier, R.E.2
-
23
-
-
0037047398
-
LINE drive. retrotransposition and genome instability
-
Kazazian HH Jr, Goodier JL (2002) LINE drive. retrotransposition and genome instability. Cell 110, 277-280
-
(2002)
Cell
, vol.110
, pp. 277-280
-
-
Kazazian Jr., H.H.1
Goodier, J.L.2
-
24
-
-
0026027982
-
A position-effect assay for boundaries of higher order chromosomal domains
-
Kellum R, Schedl P (1991) A position-effect assay for boundaries of higher order chromosomal domains. Cell 64, 941-950
-
(1991)
Cell
, vol.64
, pp. 941-950
-
-
Kellum, R.1
Schedl, P.2
-
25
-
-
0026711089
-
A group of scs elements function as domain boundaries in an enhancer-blocking assay
-
Kellum R, Schedl P (1992) A group of scs elements function as domain boundaries in an enhancer-blocking assay. Mol Cell Biol 12, 2424-2431
-
(1992)
Mol Cell Biol
, vol.12
, pp. 2424-2431
-
-
Kellum, R.1
Schedl, P.2
-
26
-
-
0036226603
-
BLAT - The BLAST-Like Alignment Tool
-
Kent WJ (2002) BLAT - The BLAST-Like Alignment Tool. Genome Res 12, 656-664
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
27
-
-
0036079158
-
The human genome browser at UCSC
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, et al. (2002) The human genome browser at UCSC. Genome Res 12, 996-1006
-
(2002)
Genome Res
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
-
28
-
-
0013591906
-
Transcriptional "silencer" element in rat repetitive sequences associated with the rat insulin 1 gene locus
-
Laimins L, Holmgren-Konig M, Khoury G (1986) Transcriptional "silencer" element in rat repetitive sequences associated with the rat insulin 1 gene locus. Proc Natl Acad Sci USA 83, 3151-3155
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 3151-3155
-
-
Laimins, L.1
Holmgren-Konig, M.2
Khoury, G.3
-
29
-
-
2942565680
-
Both CTCF-dependent and -independent insulators are found between the mouse T cell receptor alpha and Dad1 genes
-
Magdinier F, Yusufzai TM, Felsenfeld G (2004) Both CTCF-dependent and -independent insulators are found between the mouse T cell receptor alpha and Dad1 genes. J Biol Chem 279, 25381-25389
-
(2004)
J Biol Chem
, vol.279
, pp. 25381-25389
-
-
Magdinier, F.1
Yusufzai, T.M.2
Felsenfeld, G.3
-
30
-
-
4444261501
-
The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide
-
Mukhopadhyay R, Yu W, Whitehead J, Xu J, Lezcano M, et al. (2004) The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide. Genome Res 14, 1594-1602
-
(2004)
Genome Res
, vol.14
, pp. 1594-1602
-
-
Mukhopadhyay, R.1
Yu, W.2
Whitehead, J.3
Xu, J.4
Lezcano, M.5
-
31
-
-
0035035983
-
An insulator element from the sea urchin Hemicentrotus pulcherrimus suppresses variation in transgene expression in cultured tobacco cells
-
Nagaya S, Yoshida K, Kato K, Akasaka K, Shinmyo A (2001) An insulator element from the sea urchin Hemicentrotus pulcherrimus suppresses variation in transgene expression in cultured tobacco cells. Mol Genet Genomics 265, 405-413
-
(2001)
Mol Genet Genomics
, vol.265
, pp. 405-413
-
-
Nagaya, S.1
Yoshida, K.2
Kato, K.3
Akasaka, K.4
Shinmyo, A.5
-
32
-
-
0035451090
-
CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease
-
Ohlsson R, Renkawitz R, Lobanenkov V (2001) CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease. Trends Genet 17, 520-527
-
(2001)
Trends Genet
, vol.17
, pp. 520-527
-
-
Ohlsson, R.1
Renkawitz, R.2
Lobanenkov, V.3
-
33
-
-
0034161329
-
Mapping chromosomal proteins in vivo by formaldehyde-crosslinked- chromatin immunoprecipitation
-
Orlando V (2000) Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 25, 99-104
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 99-104
-
-
Orlando, V.1
-
34
-
-
0026064340
-
Control region and gastric specific transcription of the rat H+,K(+)-ATPase alpha subunit gene
-
Oshiman K, Motojima K, Mahmood S, Shimada A, Tamura S, et al. (1991) Control region and gastric specific transcription of the rat H+,K(+)-ATPase alpha subunit gene. FEBS Lett 281, 250-254
-
(1991)
FEBS Lett
, vol.281
, pp. 250-254
-
-
Oshiman, K.1
Motojima, K.2
Mahmood, S.3
Shimada, A.4
Tamura, S.5
-
35
-
-
3342878376
-
Prospects and implications of using chromatin insulators in gene therapy and transgenesis
-
Recillas-Targa F, Valadez-Graham V, Farrell CM (2004) Prospects and implications of using chromatin insulators in gene therapy and transgenesis. Bioessays 26, 796-807
-
(2004)
Bioessays
, vol.26
, pp. 796-807
-
-
Recillas-Targa, F.1
Valadez-Graham, V.2
Farrell, C.M.3
-
36
-
-
0023188177
-
Chromosomal localization of human endogenous retroviral element ERV1 to 18q22-q23 by in situ hybridization
-
Renan MJ, Reeves BR (1987) Chromosomal localization of human endogenous retroviral element ERV1 to 18q22-q23 by in situ hybridization. Cytogenet Cell Genet 44, 167-170
-
(1987)
Cytogenet Cell Genet
, vol.44
, pp. 167-170
-
-
Renan, M.J.1
Reeves, B.R.2
-
38
-
-
0025780879
-
Neonatal lethality and lymphopenia in mice with a homozygous disruption of the c-abl proto-oncogene
-
Tybulewicz VL, Crawford CE, Jackson PK, Bronson RT, Mulligan RC (1991) Neonatal lethality and lymphopenia in mice with a homozygous disruption of the c-abl proto-oncogene. Cell 65, 1153-1163
-
(1991)
Cell
, vol.65
, pp. 1153-1163
-
-
Tybulewicz, V.L.1
Crawford, C.E.2
Jackson, P.K.3
Bronson, R.T.4
Mulligan, R.C.5
-
39
-
-
0026442891
-
Identification of a mouse brain cDNA that encodes a protein related to the Alzheimer disease-associated amyloid beta protein precursor
-
Wasco W, Bupp K, Magendantz M, Gusella JF, Tanzi RE, et al. (1992) Identification of a mouse brain cDNA that encodes a protein related to the Alzheimer disease-associated amyloid beta protein precursor. Proc Natl Acad Sci USA 89, 10758-10762
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 10758-10762
-
-
Wasco, W.1
Bupp, K.2
Magendantz, M.3
Gusella, J.F.4
Tanzi, R.E.5
-
40
-
-
24344510293
-
Chromatin domain boundaries: Insulators and beyond
-
Wei GH, de Liu P, Liang CC (2005) Chromatin domain boundaries: insulators and beyond. Cell Res 15, 292-300
-
(2005)
Cell Res
, vol.15
, pp. 292-300
-
-
Wei, G.H.1
De Liu, P.2
Liang, C.C.3
-
41
-
-
17444369067
-
Remote control of gene transcription
-
West AG, Fraser P (2005) Remote control of gene transcription. Hum Mol Genet 14 (Spec No). 1, R101-111
-
(2005)
Hum Mol Genet
, vol.14
, Issue.1 SPEC NO
-
-
West, A.G.1
Fraser, P.2
|