Analysis of the first complete DNA sequence of an invertebrate iridovirus: Coding strategy of the genome of Chilo iridescent virus

Virology

Volumn 286, Issue 1, 2001, Pages 182-196

  Jakob, Nurith J ^a   Müller, Kristin ^a   Bahr, Udo ^a   Darai, Gholamreza ^a  

^a UNIVERSITY OF HEIDELBERG   (Germany)

Author keywords

Chilo iridescent virus; Computer analysis; Cytoplasmic DNA viruses; DNA nucleotide and amino acid sequence alignment; Insect iridescent virus type 6; Iridoviridae; Protein alignment

Indexed keywords

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; COMPUTER ANALYSIS; DNA SEQUENCE; DNA STRAND BREAKAGE; GENETIC ANALYSIS; INVERTEBRATE; IRIDOVIRUS; MOLECULAR EVOLUTION; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; SPECIES DIFFERENTIATION; VIRUS CAPSID; VIRUS GENOME; VIRUS REPLICATION;

CHILO; CHILO IRIDESCENT VIRUS; DNA VIRUSES; INSECTA; INVERTEBRATA; IRIDOVIRIDAE; IRIDOVIRUS; LYMPHOCYSTIS DISEASE VIRUS; MIRIDAE; RHIZOMUCOR PUSILLUS;

EID: 0035919712     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.2001.0963     Document Type: Article

References (60)

1. Nucleotide sequence of 21.8 kbp of variola major virus strain Harvey and comparison with vaccinia virus
2. The DNA-sequence of Chilo iridescent virus between the genome coordinates 0.101 and 0.391: Similarities in coding strategy between insect and vertebrate iridoviruses
3. PROSITE: A dictionary of sites and patterns in proteins
4. Structure and regulation of the immediate early frog virus 3 gene that encodes ICR489, an animal DNA virus, is circularly permuted and terminally redundant
5. The primary structure of sillucin and antimicrobial peptide from Mucor pusillus
6. Poxviruses as expression vectors
7. Inhibition of macromolecular synthesis in cells infected with an invertebrate virus (iridovirus type 6 or CIV)
8. Replication of type 6 iridovirus in various cell lines
9. Isolation and reconstitution of chilo iridescent virus membrane
10. Characterization and localization of CIV polypeptides
11. Protein composition of Chilo iridescent virus
12. An apoptosis-inhibiting baculovirus gene with a zinc finger-like motif
13. Analysis of the genome of fish lymphocystis disease virus isolated directly from epidermal tumours of pleuronectes
14. Molecular cloning and physical mapping of the genome of fish lymphocystis disease virus
15. Channel catfish virus: A new type of herpesvirus
16. DNA analysis of insect iridescent virus 6: Evidence for circular permutation and terminal redundancy
17. Analysis of membrane and surface protein sequences with the hydrophobic moment plot
18. Identification and characterization of the repetitive DNA element in the genome of insect iridescent virus type 6
19. DNA nucleotide sequence analysis of the PvuII DNA fragment L of the genome of insect iridescent virus type 6 reveals a complex cluster of multiple tandem, overlapping, and interdigitated repetitive DNA elements
20. Molecular biology of insect iridescent virus
21. A Chilo iridescent virus (CIV) from the rice stem borer, Chilo suppressalis Walker (Lepidoptera: Pyralidae)
22. Ribonucleic acid isolated by cesium chloride centrifugation
23. The genome of frog virus 3, an animal DNA virus, is circularly permuted and terminally redundant
24. Identification and mapping of origins of DNA replication within the DNA sequences of the genome of insect iridescent virus type 6
25. An epizootic of patient iridescent virus disease in multiple species of blackflies in Chiapas, Mexico
26. CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
27. DNA-dependent RNA polymerase subunits encoded within the vaccinia virus genome
28. Characterization of a new iridovirus isolated from crickets and investigations on the host range
29. A highly conserved sequence defining the family of MutT-related proteins from eubacteria, eukaryotes and viruses
30. Evolution of thymidine and thymidylate kinases: The possibility of independent capture of TK genes by different groups of viruses
31. Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach
32. Rapid and sensitive protein similarity searches
33. Finding new mutator strains of Escherichia coli - A review
34. Host range restricted, non-replicating vaccinia virus vectors as vaccine candidates
35. Identification of a thymidylat synthase gene within the genome of Chilo iridescent virus
36. Identification of a gene cluster within the genome of Chilo iridescent virus encoding enzymes involved in viral DNA replication and processing
37. Molecular cloning and physical mapping of the genome of insect iridescent virus type 6: Further evidence for circular permutation of the viral genome
38. Molecular biology of fish lymphocystis disease virus
39. Identification of genes encoding zinc finger proteins, non-histone chromosomal HMG protein homologue, and a putative GTP phosphohydrolase in the gnome of Chilo iridescent virus
40. Insect iridescent virus type 6 encodes a polypeptide related to the largest subunit of eukaryotic RNA polymerase II
41. Vaccinia virus encodes a thymidylate kinase gene: Sequence and transcriptional mapping
42. Fluorescence detection in automated DNA sequence analysis
43. Characterization of the genome of insect iridescent virus type 6 by physical mapping
44. Characterization of the third origin of DNA replication of the genome of insect iridescent virus type 6
45. Chilo iridescent virus encodes a putative helicase belonging to a distinct family within the "DEAD/H" superfamily: Implications for the evolution of large DNA viruses
46. Identification of the primary structure and the coding capacity of the genome of insect iridescent virus type 6 between the genome coordinates 0.310 and 0.347 (7990 bp)
47. Evolution of viral DNA-dependent RNA polymerases
48. The multifaceted roles of the RNA processing enzyme ribonuclease III
49. Identification of the gene encoding the major capsid protein of insect iridescent virus type 6 by polymerase chain reaction
50. Brahma: A regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2
51. The complete DNA sequence of lymphocystis disease virus
52. Is the major capsid protein of iridoviruses a suitable target for the study of viral evolution?
53. Iridovirus homologues of cellular genes - Implications for the molecular evolution of large DNA viruses
54. Vaccinia virus encodes an essential gene with strong homology to protein kinases
55. Rat insulin genes: Construction of plasmids containing the coding sequences
56. A new method for predicting signal sequence cleavage sites
57. Physical mapping of the DNA genome of insect iridescent virus type 9 from Wiseana sp. larvae
58. African swine fever virus thymidylate kinase gene: Sequence and transcriptional mapping