Mass measurements of increased accuracy resolve heterogeneous populations of intact ribosomes

Journal of the American Chemical Society

Volumn 128, Issue 35, 2006, Pages 11433-11442

  McKay, Adam R ^a   Ruotolo, Brandon T ^a   Ilag, Leopold L ^a,b   Robinson, Carol V ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b STOCKHOLM UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEXATION; CORRELATION METHODS; MASS SPECTROMETRY; MOLECULAR DYNAMICS; SPECTRUM ANALYZERS;

NONCOVALENT COMPLEXES; PROTEIN ASSEMBLIES; RIBOSOMES; UNIFORM PARTICLES;

PROTEINS;

BACTERIAL PROTEIN; RIBOSOME PROTEIN; SODIUM CHLORIDE;

ACCURACY; ARTICLE; COMPLEX FORMATION; CORRELATION ANALYSIS; MACROMOLECULE; MEASUREMENT; NONHUMAN; PROTEIN ASSEMBLY; PROTEIN DETERMINATION; RIBOSOME; RIBOSOME SUBUNIT; TANDEM MASS SPECTROMETRY; THERMUS THERMOPHILUS;

MODELS, MOLECULAR; MOLECULAR WEIGHT; PROTEIN SUBUNITS; RIBOSOMAL PROTEINS; RIBOSOMES; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TANDEM MASS SPECTROMETRY; THERMUS THERMOPHILUS;

EID: 33748368713     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja061468q     Document Type: Article

References (37)

1. Beynon, J. H. Nature 1954, 174, 735.
2. Henzel, W. J.; Billed, T. M.; Stults, J. T.; Wong, S. C.; Grimley, C.; Watanabe, C. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 5011-5015.
3. Wilm, M.; Mann, M. Int. J. Mass Spectrom. Ion Processes 1994, 136, 167-180.
4. Wilm, M.; Mann, M. Anal. Chem. 1996, 68, 1-8.
5. Chung, E. W.; Henriques, D. A.; Renzoni, D.; Morton, C. J.; Mulhern, T. D.; Pitkeathly, M. C.; Ladbury, J. E.; Robinson, C. V. Protein Sci. 1999, 8, 1962-1970.
6. Sobott, F.; Hernandez, H.; McCammon, M. G.; Tito, M. A.; Robinson, C. V. Anal. Chem. 2002, 74, 1402-1407.
7. Tito, M. A.; Tars, K.; Valegard, K.; Hajdu, J.; Robinson, C. V. J. Am. Chem. Soc. 2000, 122, 3550-3551.
8. Fuerstenau, S. D.; Benner, W. H.; Thomas, J. J.; Brugidou, C.; Bothner, B.; Siuzdak, G. Angew. Chem., Int. Ed. Engl. 2001, 40, 982.
9. Benjamin, D. R.; Robinson, C. V.; Hendrick, J. P.; Haiti, F. U.; Dobson, C. M. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 7391-7395.
10. Rostom, A. A.; Fucini, P.; Benjamin, D. R.; Juenemann, R.; Nierhaus, K. H.; Hartl, F. U.; Dobson, C. M.; Robinson, C. V. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 5185-5190.
11. Dole, M.; Mack, L. L.; Hines, R. L.; Mobley, R. C.; Ferguson, L. D.; Alice, M. B. J. Chem. Phys. 1968, 49, 2240-2249.
12. Nettleton, E. J.; Sunde, M.; Lai, Z.; Kelly, J. W.; Dobson, C. M.; Robinson, C. V. J. Mol. Biol. 1998, 281, 553-564.
13. Rostom, A. A.; Robinson, C. V. J. Am. Chem. Soc. 1999, 121, 4718-4719.
14. Green, B. N.; Gotoh, T.; Suzuki, T.; Zal, F.; Lallier, F. H.; Toulmond, A.; Vinogradov, S. N. J. Mol. Biol. 2001, 309, 553-560.
15. Sobott, F.; Robinson, C. V. Int. J. Mass Spectrom. 2004, 236, 25-32.
16. Benesch, J. L. P.; Sobott, F.; Robinson, C. V. Anal. Chem. 2003, 75, 2208-2214.
17. Spedding, G. Oxford University Press: Oxford, 1990; pp 1-27.
18. Clemons, W. M., Jr.; Brodersen, D. E.; McCutcheon, J. P.; May, J. L.; Carter, A. P.; Morgan-Warren, R. J.; Wimberly, B. T.; Ramakrishnan, V. J. Mol. Biol. 2001, 310, 827-843.
19. Lee, B.; Richards, F. M. J. Mol. Biol. 1971, 55, 379-400.
20. Ilag, L. L.; Videler, H.; McKay. A. R.; Sobott, F.; Fucini, P.; Nierhaus, K. H.; Robinson, C. V. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 8192-8197.
21. Ilag, L. L.; Westblade, L. F.; Deshayes, C.; Kolb, A.; Busby, S. J.; Robinson, C. V. Structure 2004, 12, 269-275.
22. Sharon, M.; Witt, S.; Felderer, K.; Rockel, B.; Baumeister, W.; Robinson, C. V. J. Biol. Chem. 2006, 281, 9569-9575.
23. Guex, N.; Peitsch, M. C. Electrophoresis 1997, 18, 2714-2723.
24. Schurig, H.; Rutkat, K.; Rachel, R.; Jaenicke, R. Protein Sci. 1995, 4, 228-236.
25. van Duijn, E.; Bakkes, P. J.; Heeren, R. M. A.; van den Heuvell, R. H. H.; van Heerikhuizen, H.; van der Vies, S. M.; Heck, A. J. R. Nat. Methods 2005, 2, 371-376.
26. Callaghan, A. J.; Aurikko, J. P.; Ilag, L. L.; Gunter Grossmann, J.; Chandran, V.; Kuhnel, K.; Poljak, L.; Carpousis, A. J.; Robinson, C. V.; Symmons, M. F.; Luisi, B. F. J. Mol. Biol. 2004, 340, 965-979.
27. Callaghan, A. J.; Grossmann, J. G.; Redko, Y. U.; Has, L. L.; Moncrieffe, M. C.; Symmons, M. F.; Robinson, C. V.; McDowall, K. J.; Luisi, B. F. Biochemistry 2003, 42, 13848-13855.
28. Harms, J.; Schluenzen, F.; Zarivach, R.; Bashan, A.; Gat, S.; Agmon, I.; Barrels, H.; Franceschi, F.; Yonath, A. Cell 2001, 107, 679-688.
29. Schluenzen, F.; Tocilj, A.; Zarivach, R.; Harms, J.; Gluehmann, M.; Janell, D.; Bashan, A.; Barrels, H.; Agmon, I.; Franceschi, F.; Yonath, A. Cell 2000, 102, 615-623.
30. Ban, N.; Nissen, P.; Hansen, J.; Moore, P. B.; Steitz, T. A. Science 2000, 289, 905-920.
31. Wimberly, B. T.; Brodersen, D. E.; Clemmons, W. M., Jr; Morgan-Warren, R. J.; Carter, A. P.; Vonrhein, C.; Hartsch, T.; Ramamkrishnan, V. Nature 2000, 407, 327-339.
32. Liljas, A. World Scientific Publishing Co. Pte. Ltd.,: 2004; pp 42-46.
33. Subramanian, A. R. J. Mol. Gen. Genet. 1977, 158, 1-9.
34. Dobo, A.; Kaltashov, I. A. Anal. Chem. 2001, 73, 4763-4773.
35. Shiryaev, V. M.; Selivanova, O. M.; Hartsch, T.; Nazimov, I. V.; Spirin, A. S. FEBS Lett. 2002, 525, 88.
36. Tsiboli, P.; Herfurth, E.; Choli, T. Eur. J. Biochem. 1994, 226, 169-177.
37. Ferrige, A. G.; Seddon, M. J.; Green, B. N.; Jarvis, S. A.; Skilling, J. Rapid Commun. Mass Spectrom. 1992, 6, 707-711.