Heptameric (L12)6/L10 rather than canonical pentameric complexes are found by tandem MS of intact ribosomes from thermophilic bacteria

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 23, 2005, Pages 8192-8197

  Ilag, Leopold L ^a,c   Videler, Hortense ^a   McKay, Adam R ^a   Sobott, Frank ^a   Fucini, Paola ^b   Nierhaus, Knud H ^b   Robinson, Carol V ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b MAX PLANCK INSTITUTE FOR MOLECULAR GENETICS   (Germany)

^c STOCKHOLM UNIVERSITY   (Sweden)

Author keywords

Bacterial ribosomes; L7 L12 stalk complex; Mass spectrometry

Indexed keywords

GUANOSINE TRIPHOSPHATASE; PROTEIN SUBUNIT;

AMINO ACID SEQUENCE; ARTICLE; DEINOCOCCUS RADIODURANS; HALOARCULA MARISMORTUI; MACROMOLECULE; NONHUMAN; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN CONFORMATION; PROTEIN PHOSPHORYLATION; PROTEIN RNA BINDING; PROTEIN SECRETION; PROTEIN SYNTHESIS; PROTEOMICS; RIBOSOME; STOICHIOMETRY; TANDEM MASS SPECTROMETRY; THERMOPHILIC BACTERIUM; THERMUS THERMOPHILUS;

AMINO ACID SEQUENCE; BACILLUS SUBTILIS; ELECTROSTATICS; ESCHERICHIA COLI; MASS SPECTROMETRY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; MULTIPROTEIN COMPLEXES; PROTEIN STRUCTURE, QUATERNARY; PROTEIN SUBUNITS; RIBOSOMAL PROTEINS; RIBOSOMES; THERMUS THERMOPHILUS;

DEINOCOCCUS RADIODURANS; HALOARCULA MARISMORTUI; THERMUS THERMOPHILUS;

EID: 20444427617     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0502193102     Document Type: Article

References (35)

1. Wimberly, B. T., Brodersen, D. E., Clemons, W. M., Jr., Morgan-Warren, R. J., Carter, A. P., Vonrhein, C., Hartsch, T. & Ramakrishnan, V. (2000) Nature 407, 327-339.
2. Schluenzen, F., Tocilj, A., Zarivach, R., Harms, J., Gluehmann, M., Janell, D., Bashan, A., Bartels, H., Agmon, I., Franceschi, F. & Yonath, A. (2000) Cell 102, 615-623.
3. Harms, J., Schluenzen, F., Zarivach, R., Bashan, A., Gat, S., Agmon, I., Bartels, H., Franceschi, F. & Yonath, A. (2001) Cell 107, 679-688.
4. Ban, N., Nissen, P., Hansen, J., Moore, P. B. & Steitz, T. A. (2000) Science 289, 905-920.
5. Gudkov, A. T., Tumanova, L. G., Venyaminov, S. Y. & Khechinashvilli, N. N. (1978) FEBS Lett. 93, 215-218.
6. Yusupova, M., Yusupova, G., Baucom, A., Lieberman, K., Earnest, T., Cate, J. & Noller, H. (2001) Science 292, 883-896.
7. Hanson, C. L., Fucini, P., Ilag, L. L., Nierhaus, K. H. & Robinson, C. V. (2003) J. Biol. Chem. 278, 1259-1267.
8. Fenn, J. B., Mann, M., Meng, C. K., Wong, S. F. & Whitehouse, C. M. (1989) Science 246, 64-68.
9. Rostom, A. A., Fucini, P., Benjamin, D. R., Juenemann, R., Nierhaus, K. H., Hartl, F. U., Dobson, C. M. & Robinson, C. V. (2000) Proc. Natl. Acad. Sci. USA 97, 5185-5190.
10. Hanson, C. L., Videler, H., Santos, C., Ballesta, J. P. G. & Robinson, C. V. (2004) J. Biol. Chem. 279, 42750-42757.
11. Spedding, G., ed. (1990) Ribosomes and Protein Synthesis: A Practical Approach (Oxford Univ. Press, Oxford), pp. 1-27.
12. Clemons, W., Brodersen, D., McCutcheon, J., May, J., Carter, A., Morgan-Warren, R., Wimberly, B. & Ramakrishnan, V. (2001) J. Mol. Biol. 310, 827-843.
13. Sobott, F., Hernandez, H., McCammon, M. G., Tito, M. A. & Robinson, C. V. (2002) Anal. Chem. 74, 1402-1407.
14. Mardones, E., Amaro, A. M. & Jerez, C. A. (1980) J. Bacteriol. 142, 355-358.
15. Nettleton, E. J., Sunde, M., Lai, V., Kelly, J. W., Dobson, C. M. & Robinson, C. V. (1998) J. Mol. Biol. 281, 553-564.
16. Tito, M. A., Tars, K., Valegard, K., Hadju, J. & Robinson, C. V. (2000) J. Am. Chem. Soc. 122, 350-351.
17. Murzina, N. V., Vorozheykina, D. P. & Marvienko, N. I. (1988) Nucleic Acids Res. 16, 8172.
18. Ilag, L. L., Westblade, L. F., Deshayes, C., Kolb, A., Busby, S. J. W. & Robinson, C. V. (2004) Structure (London) 12, 269-275.
19. Mann, M., Hendrickson, R. & Pandey, A. (2001) Annu. Rev. Biochem. 70, 437-473.
20. Yates, J. R. (2004) Annu. Rev. Biophys. Biomol. Struct. 33, 297-316.
21. Versluis, C., Van der Staaij, A., Stokvis, E., Heck, A. J. R. & Craene, B. D. (2001) J. Am. Soc. Mass Spectrom. 12, 329-336.
22. Felitsyn, N., Kitova, E. N. & Klassen, J. S. (2001) Anal. Chem. 73, 4647-4661.
23. Sobott, F., McCammon, M. G. & Robinson, C. V. (2003) Int. J. Mass Spectrom. 230, 193-200.
24. Jurchen, J. C. & Williams, E. R. (2003) J. Am. Chem. Soc. 125, 2817-2826.
25. Aquilina, A., Benesch, J. L. P., Ding, L. L., Yaron, O., Horwitz, J. & Robinson, C. V. (2004) J. Biol. Chem. 279, 28675-28680.
26. Schurig, H., Rutkat, K., Rachel, R. & Jaenicke, R. (1995) Protein Sci. 4, 228-236.
27. Symmons, M. F., Williams, M. G., Luisi, B. F., Jones, G. H. & Carpousis, A. J. (2002) Trends Biochem. Sci. 27, 11-18.
28. vanHoof, A., Frischmeyer, P. A., Dietz, H. C. & Parker, R. (2002) Science 295, 2262-2264.
29. Baer, T. & Mayer, P. M. (1997) J. Am. Soc. Mass Spectrom. 8, 103-115.
30. Gonzalo, P. & Reboud, J. P. (2003) Biol. Cell 95, 179-193.
31. Griaznova, O. & Traut, R. R. (2000) Biochemistry 39, 4075-4081.
32. McGuffin, L. J., Bryson, K. & Jones, D. T. (2000) Bioinformatics 16, 404-405.
33. Zambrano, R., Briones, E., Remacha, M. & Ballesta, J. P. G. (1997) Biochemistry 36, 14439-14446.
34. Carson, M. (1991) J. Appl. Crystallogr. 24, 958-961.
35. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680.