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note
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6 steps of sampling.
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note
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The thermodynamic integration calculations were performed by averaging 5×1 ns simulations for each of the 61 points between λ=0 and λ = 1 for a grand total of 305 ns. The simulation temperature and pressure were held constant at 298 K and 1 atm using the Andersen NPT integrator. The solute was parametrized using a modified version of the CharmM22 force field.
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