Direct molecular haplotyping of multiple polymorphisms within exon 4 of the human catechol-O-methyltransferase gene by liquid chromatography-electrospray ionization time-of-flight mass spectrometry

Analytical and Bioanalytical Chemistry

Volumn 386, Issue 1, 2006, Pages 83-91

  Oberacher, Herbert ^a   Pitterl, Florian ^a   Niederstätter, Harald ^a   Weiss, Elisabeth M ^a   Stadelmann, Edith ^a   Marksteiner, Josef ^a   Parson, Walther ^a  

^a INNSBRUCK MEDICAL UNIVERSITY   (Austria)

Author keywords

COMT; Electrospray ionization; Haplotyping; Liquid chromatography; Mass spectrometry

Indexed keywords

COMT; ELECTROSPRAY IONIZATION; HAPLOTYPING; HUMAN CATECHOL-O-METHYLTRANSFERASE GENE;

AMINO ACIDS; BIOLOGICAL MEMBRANES; ENZYMES; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; IONIZATION; MASS SPECTROMETRY;

GENES;

CATECHOL METHYLTRANSFERASE; DNA;

CONFERENCE PAPER; DNA SEQUENCE; ELECTROSPRAY MASS SPECTROMETRY; EXON; FEMALE; GENETIC POLYMORPHISM; GENETICS; HAPLOTYPE; HUMAN; ISOLATION AND PURIFICATION; LIQUID CHROMATOGRAPHY; MALE; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; TIME;

BASE SEQUENCE; CATECHOL O-METHYLTRANSFERASE; CHROMATOGRAPHY, LIQUID; DNA; EXONS; FEMALE; HAPLOTYPES; HUMANS; MALE; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TIME FACTORS;

EID: 33747597274     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-006-0589-9     Document Type: Conference Paper

References (43)

1. Weinshilboum RM, Otterness DM, Szumlanski CL (1999) Annu Rev Pharmacol Toxicol 39:19-52
2. Zhu BT (2002) Curr Drug Metab 3:321-349
3. Robbins TW (2000) Exp Brain Res 133:130-138
4. Arnsten AF, Li BM (2005) Biol Psychiatry 57:1377-1384
5. Tenhunen J, Salminen M, Lundstrom K, Kiviluoto T, Savolainen R, Ulmanen I (1994) Eur J Biochem 223:1049-1059
6. Matsumoto M, Weickert CS, Beltaifa S, Kolachana B, Chen J, Hyde TM, Herman MM, Weinberger DR, Kleinman JE (2003) Neuropsychopharmacology 28:1521-1530
7. Grossman MH, Creveling CR, Rybczynski R, Braverman M, Isersky C, Breakefield XO (1985) J Neurochem 44:421-432
8. Lotta T, Vidgren J, Tilgmann C, Ulmanen I, Melen K, Julkunen I, Taskinen J (1995) Biochemistry 34:4202-4210
9. Weinshilboum RM, Raymond FA (1977) Am J Hum Genet 29:125-135
10. Lachman HM, Papolos DF, Saito T, Yu YM, Szumlanski CL, Weinshilboum RM (1996) Pharmacogenetics 6:243-250
11. Hoda F, Nicholl D, Bennett P, Arranz M, Aitchison KJ, al-Chalabi A, Kunugi H, Vallada H, Leigh PN, Chaudhuri KR, Collier DA (1996) Biochem Biophys Res Commun 228:780-784
12. Tiihonen J, Hallikainen T, Lachman H, Saito T, Volavka J, Kauhanen J, Salonen JT, Ryynanen OP, Koulu M, Karvonen MK, Pohjalainen T, Syvalahti E, Hietala J (1999) Mol Psychiatry 4:286-289
13. Shifman S, Bronstein M, Sternfeld M, Pisante-Shalom A, Lev-Lehman E, Weizman A, Reznik I, Spivak B, Grisaru N, Karp L, Schiffer R, Kotler M, Strous RD, Swartz-Vanetik M, Knobler HY, Shinar E, Beckmann JS, Yakir B, Risch N, Zak NB, Darvasi A (2002) Am J Hum Genet 71:1296-1302
14. Glatt SJ, Faraone SV, Tsuang MT (2003) Am J Psychiatry 160:469-476
15. Woo JM, Yoon KS, Yu BH (2002) Am J Psychiatry 159:1785-1787
16. Rujescu D, Giegling I, Gietl A, Hartmann AM, Moller HJ (2003) Biol Psychiatry 54:34-39
17. Diatchenko L, Slade GD, Nackley AG, Bhalang K, Sigurdsson A, Belfer I, Goldman D, Xu K, Shabalina SA, Shagin D, Max MB, Makarov SS, Maixner W (2005) Hum Mol Genet 14: 135-143
18. Crawford DC, Nickerson DA (2005) Annu Rev Med 56:303-320
19. Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, Blumenstiel B, Higgins J, DeFelice M, Lochner A, Faggart M, Liu-Cordero SN, Rotimi C, Adeyemo A, Cooper R, Ward R, Lander ES, Daly MJ, Altshuler D (2002) Science 296:2225-2229
20. Kristensen VN, Kelefiotis D, Kristensen T, Borresen-Dale AL (2001) BioTechniques 30:318-322
21. Syvanen AC (2001) Nat Rev Genet 2:930-942
22. Oberacher H, Oefner PJ, Parson W, Huber CG (2001) Angew Chem Int Ed 40:3828-3830
23. Oberacher H, Huber CG (2003) Anal Bioanal Chem 376: 292-294
24. Oberacher H, Huber CG, Oefner PJ (2003) Hum Mutat 21:86-9525.
25. Oberacher H, Niederstätter H, Casetta B, Parson W (2005) Anal Chem 77:4999-5008
26. Oberacher H, Niederstätter H, Huber CG, Parson W (2006) Anal Bioanal Chem 384:1155-1163
27. Clark AG (1990) Mol Biol Evol 7:111-122
28. Fallin D, Schork NJ (2000) Am J Hum Genet 67:947-959
29. Douglas JA, Boehnke M, Gillanders E, Trent JM, Gruber SB (2001) Nat Genet 28:361-364
30. Van H, Papadopoulos N, Marra G, Perrera C, Jiricny J, Boland CR, Lynch HT, Chadwick RB, de la Chapelle A, Berg K, Eshleman JR, Yuan W, Markowitz S, Laken SJ, Lengauer C, Kinzler KW, Vogelstein B (2000) Nature 403:723-724
31. Oberacher H, Oefner PJ, Hölzl G, Premstaller A, Huber CG (2002) Nucleic Acids Res 30:e67
32. Oberacher H, Parson W, Hölzl G, Oefner PJ, Huber CG (2004) J Am Soc Mass Spectrom 15:1897-1906
33. Oberacher H, Niederstätter H, Casetta B, Parson W (2006) J Am Soc Mass Spectrom 17:124-129
34. Premstaller A, Oberacher H, Huber CG (2000) Anal Chem 72:4386-4393
35. Oberacher H, Premstaller A, Huber CG (2004) J Chromatogr A 1030:201-208
36. Oberacher H, Niederstätter H, Parson W (2005) J Mass Spectrom 40:932-945
37. Birney E, Andrews D, Caccamo M, Chen Y, Clarke L, Coates G, Cox T, Cunningham F, Curwen V, Cutts T, Down T, Durbin R, Fernandez-Suarez XM, Flicek P, Graf S, Hammond M, Herrero J, Howe K, Iyer V, Jekosch K, Kahari A, Kasprzyk A, Keefe D, Kokocinski F, Kulesha E, London D, Longden I, Melsopp C, Meidl P, Overduin B, Parker A, Proctor G, Prlic A, Rae M, Rios D, Redmond S, Schuster M, Sealy I, Searle S, Severin J, Slater G, Smedley D, Smith J, Stabenau A, Stalker J, Trevanion S, Ureta-Vidai A, Vogel J, White S, Woodwark C, Hubbard TJ (2006) Nucleic Acids Res 34:D556-D561
38. Sanger F, Nicklen S, Coulson AR (1977) Proc Natl Acad Sci 74:5463-5467
39. Gabrovsek M, Brecelj-Anderluh M, Bellodi L, Cellini E, Di Bella D, Estivill X, Fernandez-Aranda F, Freeman B, Geller F, Gratacos M, Haigh R, Hebebrand J, Hinney A, Holliday J, Hu X, Karwautz A, Nacmias B, Ribases M, Remschmidt H, Komel R, Sorbi S, Tomori M, Treasure J, Wagner G, Zhao J, Collier DA (2004) Am J Med Genet B Neuropsychiatry Genet 124:68-72
40. Kocabas NA, Karakaya AE, Cholerton S, Sardas S (2001) Arch Toxicol 75:407-409
41. Palmatier MA, Kang AM, Kidd KK (1999) Biol Psychiatry 46:557-567
42. Kahn K, Bruice TC (2000) J Am Chem Soc 122:46-51
43. Cotton NJ, Stoddard B, Parson WW (2004) J Biol Chem 279:23710-23718