In vacuo isotope coded alkylation technique (IVICAT); an N-terminal stable isotopic label for quantitative liquid chromatography/mass spectrometry proteomics

Rapid Communications in Mass Spectrometry

Volumn 20, Issue 16, 2006, Pages 2463-2477

  Simons, Brigitte L ^a   Wang, Guanghui ^b   Shen, Rong Fong ^b   Knepper, Mark A ^a,c  

^a Laboratory of Kidney and Electrolyte Metabolism NHBLI   (United States)

^b NATIONAL HEART LUNG AND BLOOD INSTITUTE   (United States)

^c NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; DESORPTION; ISOTOPES; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METHYLATION; MOLECULAR BIOLOGY; PEPTIDES;

ISOTOPIC LABELING; ISOTOPIC LABELS; LABELING STRATEGY; LABELINGS; LIQUID CHROMATOGRAPHY - MASS SPECTROMETRIES; METHYLATION REACTION; N-TERMINALS; POSITIVE CHARGES; PROTEOMICS; TERMINAL AMINO GROUPS;

ALKYLATION;

EID: 33747500639     PISSN: 09514198     EISSN: 10970231     Source Type: Journal    
DOI: 10.1002/rcm.2615     Document Type: Article

References (46)

1. Sinz A. J. Mass Spectrom. 2003; 38: 1225.
2. Ihling C, Berger K, Hofliger MM, Fuhrer D, Beck-Sickinger AG, Sinz A. Rapid Commun. Mass Spectrom. 2003; 17: 1240.
3. Stuhler K, Meyer HE. Curr. Opin. Mol. Ther. 2004; 6: 239.
4. Bergquist J. Curr. Opin. Mol. Ther. 2003; 5: 310.
5. Nuhse TS, Stensballe A, Jensen ON, Peck SC. Mol. Cell. Proteomics 2003; 2: 1234.
6. Krause E, Wenschuh H, Jungblut PR. Anal. Chem. 1999; 71: 4160.
7. Brancia FL, Oliver SG, Gaskell SJ. Rapid Commun. Mass Spectrom. 2000; 14: 2070.
8. Beardsley RL, Karty JA, Reilly JP. Rapid Commun. Mass Spectrom. 2000; 14: 2147.
9. Che FY, Biswas R, Fricker LD. J. Mass Spectrom. 2005; 40: 227.
10. Che FY, Fricker LD. J. Mass Spectrom. 2005; 40: 238.
11. Burlingame AL, Zhang X, Chalkley RJ. Methods 2005; 36: 383.
12. Noda Y, Fujiwara K, Yamamoto K, Fukuno T, Segawa S. Biopolymers 1994; 34: 217.
13. Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R. Nat. Biotechnol. 1999; 17: 994.
14. Gygi SP, Rist B, Griffin TJ, Eng J, Aebersold R. J. Proteome Res. 2002; 1: 47.
15. Flory MR, Griffin TJ, Martin D, Aebersold R. Trends Biotechnol. 2002; 20: S23.
16. Aebersold R, Cravatt BF. Trends Biotechnol. 2002; 20: S1.
17. Jaffrey SR. Methods Enzymol. 2005; 396: 105.
18. Hao G, Derakhshan B, Shi L, Campagne F, Gross SS. Proc. Natl. Acad. Sci. USA 2006; 103: 1012.
19. Zhang R, Sioma CS, Wang S, Regnier FE. Anal. Chem. 2001; 73: 5142.
20. Zhou H, Ranish JA, Watts JD, Aebersold R. Nat. Biotechnol. 2002; 20: 512.
21. Moulder R, Filen JJ, Salmi J, Katajamaa M, Nevalainen OS, Oresic M, Aittokallio T, Lahesmaa R, Nyman TA. Proteomics 2005; 5: 2748.
22. Bottari P, Aebersold R, Turecek F, Gelb MH. Bioconjugate Chem. 2004; 15: 380.
23. Patton WF, Schulenberg B, Steinberg TH. Curr. Opin. Biotechnol. 2002; 13: 321.
24. Hsu JL, Huang SY, Shiea JT, Huang WY, Chen SH. J. Proteome Res. 2005; 4: 101.
25. Hsu JL, Huang SY, Chow NH, Chen SH. Anal. Chem. 2003; 75: 6843.
26. Ji C, Guo N, Li L. J. Proteome Res. 2005; 4: 2099.
27. Zappacosta F, Annan RS. Anal. Chem. 2004; 76: 6618.
28. Munchbach M, Quadroni M, Miotto G, James P. Anal. Chem. 2000; 72: 4047.
29. Zhang R, Sioma CS, Thompson RA, Xiong L, Regnier FE. Anal. Chem. 2002; 74: 3662.
30. Stewart NA, Pham VT, Choma CT, Kaplan H. Rapid Commu. Mass Spectrom. 2002; 16: 1448.
31. Poon C, Kaplan H, Mayer PM. Eur. J. Mass Spectrom. 2004; 10: 39.
32. Laremore TN, Weber DM, Choma CT. Rapid Commun. Mass Spectrom. 2005; 19: 2045.
33. Wang G, Wu WW, Pisitkun T, Hoffert JD, Knepper MA, Shen R-F. Anal. Chem. 2006; accepted.
34. Hoffert JD, van Balkom BW, Chou CL, Knepper MA. Am. J. Physiol. Renal Physiol. 2004; 286: F170.
35. van Balkom BW, Hoffert JD, Chou CL, Knepper MA. Am. J. Physiol. Renal Physiol. 2004; 286: F216.
36. Pisitkun T, Bieniek J, Tchapyjnikov D, Wang G, Wu WW, Shen RF, Knepper MA. Physiol Genomics 2006; 25: 263.
37. Hoffert JD, Pisitkun T, Wang G, Shen RF, Knepper MA. Proc. Natl. Acad. Sci. USA 2006; 103: 7159.
38. Schroeder MJ, Shabanowitz J, Schwartz JC, Hunt DF, Coon JJ. Anal. Chem. 2004; 76: 3590.
39. Wade JB, Lee AJ, Liu J, Ecelbarger CA, Mitchell C, Bradford AD, Terris J, Kim GH, Knepper MA. Am. J. Physiol. Renal Physiol. 2000; 278: F52.
40. Giorgianni F, Beranova-Giorgianni S, Desiderio DM. Proteomics 2004; 4: 587.
41. Jin WH, Dai J, Zhou H, Xia QC, Zou HF, Zeng R. Rapid Commun. Mass Spectrom. 2004; 18: 2169.
42. Fu Q, Li L. Anal. Chem. 2005; 77: 7783-7795.
43. Fu Q, Li L. J. Am. Soc. Mass Spectrom. 2006; epub April 7.
44. Paizs B, Suhai S. Mass Spectrom. Rev. 2005; 24: 508.
45. Vailaya A, Horvath C. J. Chromatogr. A 1998; 829: 1.
46. Taralp A, Kaplan H. J. Protein Chem. 1997; 16: 183.