메뉴 건너뛰기




Volumn 2006, Issue , 2006, Pages

L1 antisense promoter drives tissue-specific transcription of human genes

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY RNA; MESSENGER RNA;

EID: 33746658129     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/JBB/2006/71753     Document Type: Article
Times cited : (119)

References (44)
  • 1
    • 0036796354 scopus 로고    scopus 로고
    • Mammalian retroelements
    • 12368238
    • P L Deininger M A Batzer Mammalian retroelements. Genome Research 12 2002 10 1455 1465 12368238
    • (2002) Genome Research , vol.12 , Issue.10 , pp. 1455-1465
    • Deininger, P.L.1    Batzer, M.A.2
  • 2
    • 1542513556 scopus 로고    scopus 로고
    • Mobile elements: Drivers of genome evolution
    • 15016989
    • H H Jr Kazazian Mobile elements: drivers of genome evolution. Science 303 2004 5664 1626 1632 15016989
    • (2004) Science , vol.303 , Issue.5664 , pp. 1626-1632
    • Kazazian, H.H.1    Jr2
  • 4
    • 0141561907 scopus 로고    scopus 로고
    • Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions
    • 14550626
    • L N van de Lagemaat J-R Landry D L Mager P Medstrand Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions. Trends in Genetics 19 2003 10 530 536 14550626
    • (2003) Trends in Genetics , vol.19 , Issue.10 , pp. 530-536
    • Van De Lagemaat, L.N.1    Landry, J.-R.2    Mager, D.L.3    Medstrand, P.4
  • 5
    • 0037226595 scopus 로고    scopus 로고
    • Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
    • 12483211
    • K Kashkush M Feldman A A Levy Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nature Genetics 33 2003 1 102 106 12483211
    • (2003) Nature Genetics , vol.33 , Issue.1 , pp. 102-106
    • Kashkush, K.1    Feldman, M.2    Levy, A.A.3
  • 6
    • 0034999474 scopus 로고    scopus 로고
    • Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes
    • 11238933
    • M Speek Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes. Molecular and Cellular Biology 21 2001 6 1973 1985 11238933
    • (2001) Molecular and Cellular Biology , vol.21 , Issue.6 , pp. 1973-1985
    • Speek, M.1
  • 8
    • 0035065510 scopus 로고    scopus 로고
    • Retrotransposons as epigenetic mediators of phenotypic variation in mammals
    • 11279513
    • E Whitelaw D I Martin Retrotransposons as epigenetic mediators of phenotypic variation in mammals. Nature Genetics 27 2001 4 361 365 11279513
    • (2001) Nature Genetics , vol.27 , Issue.4 , pp. 361-365
    • Whitelaw, E.1    Martin, D.I.2
  • 11
    • 0035910527 scopus 로고    scopus 로고
    • Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans
    • 11054415
    • P Medstrand J-R Landry D L Mager Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans. The Journal of Biological Chemistry 276 2001 3 1896 1903 11054415
    • (2001) The Journal of Biological Chemistry , vol.276 , Issue.3 , pp. 1896-1903
    • Medstrand, P.1    Landry, J.-R.2    Mager, D.L.3
  • 12
    • 0036854278 scopus 로고    scopus 로고
    • The Opitz syndrome gene Mid1 is transcribed from a human endogenous retroviral promoter
    • 12411602
    • J-R Landry A Rouhi P Medstrand D L Mager The Opitz syndrome gene Mid1 is transcribed from a human endogenous retroviral promoter. Molecular Biology and Evolution 19 2002 11 1934 1942 12411602
    • (2002) Molecular Biology and Evolution , vol.19 , Issue.11 , pp. 1934-1942
    • Landry, J.-R.1    Rouhi, A.2    Medstrand, P.3    Mager, D.L.4
  • 13
    • 0242331629 scopus 로고    scopus 로고
    • An endogenous retroviral long terminal repeat is the dominant promoter for human β1,3-galactosyltransferase 5 in the colon
    • 14534330
    • C A Dunn P Medstrand D L Mager An endogenous retroviral long terminal repeat is the dominant promoter for human β1,3-galactosyltransferase 5 in the colon. Proceedings of the National Academy of Sciences of the United States of America 100 2003 22 12841 12846 14534330
    • (2003) Proceedings of the National Academy of Sciences of the United States of America , vol.100 , Issue.22 , pp. 12841-12846
    • Dunn, C.A.1    Medstrand, P.2    Mager, D.L.3
  • 14
    • 25444532035 scopus 로고    scopus 로고
    • Transcription of the human and rodent SPAM1 / PH-20 genes initiates within an ancient endogenous retrovirus
    • 15804358
    • C A Dunn D L Mager Transcription of the human and rodent SPAM1 / PH-20 genes initiates within an ancient endogenous retrovirus. BMC Genomics 6 2005 1 47 15804358
    • (2005) BMC Genomics , vol.6 , Issue.1 , pp. 47
    • Dunn, C.A.1    Mager, D.L.2
  • 15
    • 0036251775 scopus 로고    scopus 로고
    • Many human genes are transcribed from the antisense promoter of L1 retrotransposon
    • 11991712
    • P Nigumann K Redik K Mätlik M Speek Many human genes are transcribed from the antisense promoter of L1 retrotransposon. Genomics 79 2002 5 628 634 11991712
    • (2002) Genomics , vol.79 , Issue.5 , pp. 628-634
    • Nigumann, P.1    Redik, K.2    Mätlik, K.3    Speek, M.4
  • 16
    • 0035189310 scopus 로고    scopus 로고
    • Spidey: A tool for mRNA-to-genomic alignments
    • 11691860
    • S J Wheelan D M Church J M Ostell Spidey: a tool for mRNA-to-genomic alignments. Genome Research 11 2001 11 1952 1957 11691860
    • (2001) Genome Research , vol.11 , Issue.11 , pp. 1952-1957
    • Wheelan, S.J.1    Church, D.M.2    Ostell, J.M.3
  • 17
    • 0036079158 scopus 로고    scopus 로고
    • The human genome browser at UCSC
    • 12045153
    • W J Kent C W Sugnet T S Furey The human genome browser at UCSC. Genome Research 12 2002 6 996 1006 12045153
    • (2002) Genome Research , vol.12 , Issue.6 , pp. 996-1006
    • Kent, W.J.1    Sugnet, C.W.2    Furey, T.S.3
  • 18
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • 9254694
    • S F Altschul T L Madden A A Schäffer Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25 1997 17 3389 3402 9254694
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3
  • 19
    • 0032964297 scopus 로고    scopus 로고
    • BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    • 10339815
    • T A Tatusova T L Madden BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiology Letters 174 1999 2 247 250 10339815
    • (1999) FEMS Microbiology Letters , vol.174 , Issue.2 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 20
    • 0036081146 scopus 로고    scopus 로고
    • DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs
    • 11752328
    • Y Suzuki R Yamashita K Nakai S Sugano DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs. Nucleic Acids Research 30 2002 1 328 331 11752328
    • (2002) Nucleic Acids Research , vol.30 , Issue.1 , pp. 328-331
    • Suzuki, Y.1    Yamashita, R.2    Nakai, K.3    Sugano, S.4
  • 22
    • 0025744474 scopus 로고
    • Prediction of human mRNA donor and acceptor sites from the DNA sequence
    • 2067018
    • S Brunak J Engelbrecht S Knudsen Prediction of human mRNA donor and acceptor sites from the DNA sequence. Journal of Molecular Biology 220 1991 1 49 65 2067018
    • (1991) Journal of Molecular Biology , vol.220 , Issue.1 , pp. 49-65
    • Brunak, S.1    Engelbrecht, J.2    Knudsen, S.3
  • 23
    • 0028788756 scopus 로고
    • Cloning and characterization of CLCN5, the human kidney chloride channel gene implicated in Dent disease (an X-linked hereditary nephrolithiasis)
    • 8575751
    • S E Fisher I van Bakel S E Lloyd S H Pearce R V Thakker I W Craig Cloning and characterization of CLCN5, the human kidney chloride channel gene implicated in Dent disease (an X-linked hereditary nephrolithiasis). Genomics 29 1995 3 598 606 8575751
    • (1995) Genomics , vol.29 , Issue.3 , pp. 598-606
    • Fisher, S.E.1    Van Bakel, I.2    Lloyd, S.E.3    Pearce, S.H.4    Thakker, R.V.5    Craig, I.W.6
  • 25
    • 0023698769 scopus 로고
    • Cloning and sequencing of pro-alpha 1 (XI) collagen cDNA demonstrates that type XI belongs to the fibrillar class of collagens and reveals that the expression of the gene is not restricted to cartilagenous tissue
    • 3182841
    • M Bernard H Yoshioka E Rodriguez Cloning and sequencing of pro-alpha 1 (XI) collagen cDNA demonstrates that type XI belongs to the fibrillar class of collagens and reveals that the expression of the gene is not restricted to cartilagenous tissue. The Journal of Biological Chemistry 263 1988 32 17159 17166 3182841
    • (1988) The Journal of Biological Chemistry , vol.263 , Issue.32 , pp. 17159-17166
    • Bernard, M.1    Yoshioka, H.2    Rodriguez, E.3
  • 27
    • 0035162594 scopus 로고    scopus 로고
    • RefSeq and LocusLink: NCBI gene-centered resources
    • 11125071
    • K D Pruitt D R Maglott RefSeq and LocusLink: NCBI gene-centered resources. Nucleic Acids Research 29 2001 1 137 140 11125071
    • (2001) Nucleic Acids Research , vol.29 , Issue.1 , pp. 137-140
    • Pruitt, K.D.1    Maglott, D.R.2
  • 28
    • 23744454779 scopus 로고    scopus 로고
    • Gene-breaking: A new paradigm for human retrotransposon-mediated gene evolution
    • 16024818
    • S J Wheelan Y Aizawa J S Han J D Boeke Gene-breaking: a new paradigm for human retrotransposon-mediated gene evolution. Genome Research 15 2005 8 1073 1078 16024818
    • (2005) Genome Research , vol.15 , Issue.8 , pp. 1073-1078
    • Wheelan, S.J.1    Aizawa, Y.2    Han, J.S.3    Boeke, J.D.4
  • 29
    • 0028920059 scopus 로고
    • Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences
    • 7877164
    • A F Smit G Tóth A D Riggs J Jurka Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences. Journal of Molecular Biology 246 1995 3 401 417 7877164
    • (1995) Journal of Molecular Biology , vol.246 , Issue.3 , pp. 401-417
    • Smit, A.F.1    Tóth, G.2    Riggs, A.D.3    Jurka, J.4
  • 30
    • 0042664189 scopus 로고    scopus 로고
    • Human RGS6 gene structure, complex alternative splicing, and role of N terminus and G protein γ-subunit-like (GGL) domain in subcellular localization of RGS6 splice variants
    • 12761221
    • T K Chatterjee Z Liu R A Fisher Human RGS6 gene structure, complex alternative splicing, and role of N terminus and G protein γ-subunit-like (GGL) domain in subcellular localization of RGS6 splice variants. The Journal of Biological Chemistry 278 2003 32 30261 30271 12761221
    • (2003) The Journal of Biological Chemistry , vol.278 , Issue.32 , pp. 30261-30271
    • Chatterjee, T.K.1    Liu, Z.2    Fisher, R.A.3
  • 31
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • 11237011
    • E S Lander L M Linton B Birren Initial sequencing and analysis of the human genome. Nature 409 2001 6822 860 921 11237011
    • (2001) Nature , vol.409 , Issue.6822 , pp. 860-921
    • Lander, E.S.1    Linton, L.M.2    Birren, B.3
  • 34
    • 0036073862 scopus 로고    scopus 로고
    • A comprehensive analysis of recently integrated human Ta L1 elements
    • 12070800
    • J S Myers B J Vincent H Udall A comprehensive analysis of recently integrated human Ta L1 elements. The American Journal of Human Genetics 71 2002 2 312 326 12070800
    • (2002) The American Journal of Human Genetics , vol.71 , Issue.2 , pp. 312-326
    • Myers, J.S.1    Vincent, B.J.2    Udall, H.3
  • 35
    • 0348048755 scopus 로고    scopus 로고
    • L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish
    • 14698614
    • A V Furano D D Duvernell S Boissinot L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish. Trends in Genetics 20 2004 1 9 14 14698614
    • (2004) Trends in Genetics , vol.20 , Issue.1 , pp. 9-14
    • Furano, A.V.1    Duvernell, D.D.2    Boissinot, S.3
  • 36
    • 8544229065 scopus 로고    scopus 로고
    • Natural genetic variation caused by transposable elements in humans
    • 15514065
    • E A Bennett L E Coleman C Tsui W S Pittard S E Devine Natural genetic variation caused by transposable elements in humans. Genetics 168 2004 2 933 951 15514065
    • (2004) Genetics , vol.168 , Issue.2 , pp. 933-951
    • Bennett, E.A.1    Coleman, L.E.2    Tsui, C.3    Pittard, W.S.4    Devine, S.E.5
  • 37
    • 0028213438 scopus 로고
    • Oligo-capping: A simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides
    • 8125298
    • K Maruyama S Sugano Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. Gene 138 1994 1-2 171 174 8125298
    • (1994) Gene , vol.138 , Issue.1-2 , pp. 171-174
    • Maruyama, K.1    Sugano, S.2
  • 38
    • 0042767995 scopus 로고    scopus 로고
    • The dynamics of chromosome organization and gene regulation
    • 14527325
    • D L Spector The dynamics of chromosome organization and gene regulation. Annual Review of Biochemistry 72 2003 573 608 14527325
    • (2003) Annual Review of Biochemistry , vol.72 , pp. 573-608
    • Spector, D.L.1
  • 40
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • 12459250
    • M Kozak Pushing the limits of the scanning mechanism for initiation of translation. Gene 299 2002 1-2 1 34 12459250
    • (2002) Gene , vol.299 , Issue.1-2 , pp. 1-34
    • Kozak, M.1
  • 41
    • 0242317345 scopus 로고    scopus 로고
    • Complex controls: The role of alternative promoters in mammalian genomes
    • 14585616
    • J-R Landry D L Mager B T Wilhelm Complex controls: the role of alternative promoters in mammalian genomes. Trends in Genetics 19 2003 11 640 648 14585616
    • (2003) Trends in Genetics , vol.19 , Issue.11 , pp. 640-648
    • Landry, J.-R.1    Mager, D.L.2    Wilhelm, B.T.3
  • 42
    • 0036135719 scopus 로고    scopus 로고
    • Transcriptional interference by independently regulated genes occurs in any relative arrangement of the genes and is influenced by chromosomal integration position
    • 11756543
    • S K Eszterhas E E Bouhassira D I Martin S Fiering Transcriptional interference by independently regulated genes occurs in any relative arrangement of the genes and is influenced by chromosomal integration position. Molecular and Cellular Biology 22 2002 2 469 479 11756543
    • (2002) Molecular and Cellular Biology , vol.22 , Issue.2 , pp. 469-479
    • Eszterhas, S.K.1    Bouhassira, E.E.2    Martin, D.I.3    Fiering, S.4
  • 44
    • 0036788304 scopus 로고    scopus 로고
    • Gene silencing in mammals by small interfering RNAs
    • 12360232
    • M T McManus P A Sharp Gene silencing in mammals by small interfering RNAs. Nature Reviews. Genetics 3 2002 10 737 747 12360232
    • (2002) Nature Reviews. Genetics , vol.3 , Issue.10 , pp. 737-747
    • McManus, M.T.1    Sharp, P.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.