메뉴 건너뛰기




Volumn 87, Issue 7, 2006, Pages 2031-2040

Sequence analysis of the fusion protein gene from infectious salmon anemia virus isolates: Evidence of recombination and reassortment

Author keywords

[No Author keywords available]

Indexed keywords

HYBRID PROTEIN;

EID: 33745586746     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.81687-0     Document Type: Article
Times cited : (51)

References (44)
  • 1
    • 33745633268 scopus 로고    scopus 로고
    • Field trial with ISAV-diseased broodfish of Atlantic salmon
    • Anonymous
    • Anonymous (2005). Field trial with ISAV-diseased broodfish of Atlantic salmon. http://www.salmobreed.no
    • (2005)
  • 2
    • 25144459484 scopus 로고    scopus 로고
    • Characterization of the infectious salmon anemia virus fusion protein
    • Aspehaug, V., Mikalsen, A. B., Snow, M., Biering, E. & Villoing, S. (2005). Characterization of the infectious salmon anemia virus fusion protein. J Virol 79, 12544-12553.
    • (2005) J Virol , vol.79 , pp. 12544-12553
    • Aspehaug, V.1    Mikalsen, A.B.2    Snow, M.3    Biering, E.4    Villoing, S.5
  • 3
    • 0034113624 scopus 로고    scopus 로고
    • Phylogenetic analysis of H7 haemagglutinin subtype influenza A viruses
    • Banks, J., Speidel, E. C., McCauley, J. W. & Alexander, D. J. (2000). Phylogenetic analysis of H7 haemagglutinin subtype influenza A viruses. Arch Virol 145, 1047-1058.
    • (2000) Arch Virol , vol.145 , pp. 1047-1058
    • Banks, J.1    Speidel, E.C.2    McCauley, J.W.3    Alexander, D.J.4
  • 4
    • 0033609141 scopus 로고    scopus 로고
    • Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens
    • Bergstrom, C. T., McElhany, P. & Real, L. A. (1999). Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens. Proc Natl Acad Sci U S A 96, 5095-5100.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 5095-5100
    • Bergstrom, C.T.1    McElhany, P.2    Real, L.A.3
  • 5
    • 0034194673 scopus 로고    scopus 로고
    • Influenza virus genetics
    • Brown, E. G. (2000). Influenza virus genetics. Biomed Pharmacother 54, 196-209.
    • (2000) Biomed Pharmacother , vol.54 , pp. 196-209
    • Brown, E.G.1
  • 6
    • 0141802650 scopus 로고    scopus 로고
    • A novel variant of the infectious salmon anaemia virus (ISAV) haemagglutinin gene suggests mechanisms for virus diversity
    • Cunningham, C. O., Gregory, A., Black, J., Simpson, I. & Raynard, R. S. (2002). A novel variant of the infectious salmon anaemia virus (ISAV) haemagglutinin gene suggests mechanisms for virus diversity. Bull Eur Ass Fish Pathol 22, 366-374.
    • (2002) Bull Eur Ass Fish Pathol , vol.22 , pp. 366-374
    • Cunningham, C.O.1    Gregory, A.2    Black, J.3    Simpson, I.4    Raynard, R.S.5
  • 7
    • 0034708021 scopus 로고    scopus 로고
    • Use of RT-PCR for diagnosis of infectious salmon anaemia virus (ISAV) in carrier sea trout Salmo trutta after experimental infection
    • Devold, M., Krossøy, B., Aspehaug, V. & Nylund, A. (2000). Use of RT-PCR for diagnosis of infectious salmon anaemia virus (ISAV) in carrier sea trout Salmo trutta after experimental infection. Dis Aquat Organ 40, 9-18.
    • (2000) Dis Aquat Organ , vol.40 , pp. 9-18
    • Devold, M.1    Krossøy, B.2    Aspehaug, V.3    Nylund, A.4
  • 8
    • 0035829312 scopus 로고    scopus 로고
    • Strain variation, based on the hemagglutinin gene, in Norwegian ISA virus isolates collected from 1987 to 2001: Indications of recombination
    • Devold, M., Falk, K., Dale, O. B., Krossøy, B., Biering, E., Aspehaug, V., Nilsen, F. & Nylund, A. (2001). Strain variation, based on the hemagglutinin gene, in Norwegian ISA virus isolates collected from 1987 to 2001: indications of recombination. Dis Aquat Organ 47, 119-128.
    • (2001) Dis Aquat Organ , vol.47 , pp. 119-128
    • Devold, M.1    Falk, K.2    Dale, O.B.3    Krossøy, B.4    Biering, E.5    Aspehaug, V.6    Nilsen, F.7    Nylund, A.8
  • 9
    • 2442646333 scopus 로고    scopus 로고
    • Evolution of the fish rhabdovirus viral haemorrhagic septicaemia vius
    • Einer-Jensen, K., Ahrens, P., Forsber, R. & Lorenzen, N. (2004). Evolution of the fish rhabdovirus viral haemorrhagic septicaemia vius. J Gen Virol 85, 1167-1179.
    • (2004) J Gen Virol , vol.85 , pp. 1167-1179
    • Einer-Jensen, K.1    Ahrens, P.2    Forsber, R.3    Lorenzen, N.4
  • 10
    • 15044351183 scopus 로고    scopus 로고
    • Genotyping of the fish rhabdovirus, viral haemorrhagic septicaemia virus, by restriction fragment length polymorphisms
    • Einer-Jensen, K., Winton, J. & Lorenzen, N. (2005). Genotyping of the fish rhabdovirus, viral haemorrhagic septicaemia virus, by restriction fragment length polymorphisms. Vet Microbiol 106, 167-178.
    • (2005) Vet Microbiol , vol.106 , pp. 167-178
    • Einer-Jensen, K.1    Winton, J.2    Lorenzen, N.3
  • 11
    • 1542317650 scopus 로고    scopus 로고
    • Identification and characterization of viral structural proteins of infectious salmon anemia virus
    • Falk, K., Aspehaug, V., Vlasak, R. & Endresen, C. (2004). Identification and characterization of viral structural proteins of infectious salmon anemia virus. J Virol 78, 3063-3071.
    • (2004) J Virol , vol.78 , pp. 3063-3071
    • Falk, K.1    Aspehaug, V.2    Vlasak, R.3    Endresen, C.4
  • 12
    • 0026516405 scopus 로고
    • Evolutionary processes in influenza viruses: Divergence, rapid evolution, and stasis
    • Gorman, O. T., Bean, W. J. & Webster, R. G. (1992). Evolutionary processes in influenza viruses: divergence, rapid evolution, and stasis. Curr Top Microbiol Immunol 176, 75-97.
    • (1992) Curr Top Microbiol Immunol , vol.176 , pp. 75-97
    • Gorman, O.T.1    Bean, W.J.2    Webster, R.G.3
  • 13
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., Kishino, H. & Yano, T. (1985). Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22, 160-174.
    • (1985) J Mol Evol , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 14
    • 1542377444 scopus 로고    scopus 로고
    • Infectious salmon anemia virus specifically binds to and hydrolyzes 4-O-acetylated sialic acids
    • Hellebø, A., Vilas, U., Falk, K. & Vlasak, R. (2004). Infectious salmon anemia virus specifically binds to and hydrolyzes 4-O-acetylated sialic acids. J Virol 78, 3055-3062.
    • (2004) J Virol , vol.78 , pp. 3055-3062
    • Hellebø, A.1    Vilas, U.2    Falk, K.3    Vlasak, R.4
  • 15
    • 26244443434 scopus 로고    scopus 로고
    • New subtype of salmonid alphavirus (SAV), Togaviridae, from Atlantic salmon Salmo salar and rainbow trout Oncorhynchus mykiss in Norway
    • Hodneland, K., Bratland, A., Christie, K. E., Endresen, C. & Nylund, A. (2005). New subtype of salmonid alphavirus (SAV), Togaviridae, from Atlantic salmon Salmo salar and rainbow trout Oncorhynchus mykiss in Norway. Dis Aquat Organ 66, 113-120.
    • (2005) Dis Aquat Organ , vol.66 , pp. 113-120
    • Hodneland, K.1    Bratland, A.2    Christie, K.E.3    Endresen, C.4    Nylund, A.5
  • 16
    • 0036147047 scopus 로고    scopus 로고
    • Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis
    • Jenkins, G. M., Rambaut, A., Pybus, O. G. & Holmes, E. C. (2002). Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. J Mol Evol 54, 156-165.
    • (2002) J Mol Evol , vol.54 , pp. 156-165
    • Jenkins, G.M.1    Rambaut, A.2    Pybus, O.G.3    Holmes, E.C.4
  • 17
    • 0035200722 scopus 로고    scopus 로고
    • Antigenic variation among isolates of infectious salmon anaemia virus correlates with genetic variation of the viral haemagglutinin gene
    • Kibenge, F. S. B., Kibenge, M. J. T., McKenna, P. K., Stothard, P., Marshall, R., Cusack, R. R. & McGeachy, S. (2001). Antigenic variation among isolates of infectious salmon anaemia virus correlates with genetic variation of the viral haemagglutinin gene. J Gen Virol 82, 2869-2879.
    • (2001) J Gen Virol , vol.82 , pp. 2869-2879
    • Kibenge, F.S.B.1    Kibenge, M.J.T.2    McKenna, P.K.3    Stothard, P.4    Marshall, R.5    Cusack, R.R.6    McGeachy, S.7
  • 18
    • 25444515684 scopus 로고    scopus 로고
    • Constitutive expression of Atlantic salmon Mx1 protein in CHSE-214 cells confers resistance to infectious salmon anaemia virus
    • Kibenge, M. J. T., Munir, K. & Kibenge, F. S. B. (2005). Constitutive expression of Atlantic salmon Mx1 protein in CHSE-214 cells confers resistance to infectious salmon anaemia virus. Virol J 2, 75.
    • (2005) Virol J , vol.2 , pp. 75
    • Kibenge, M.J.T.1    Munir, K.2    Kibenge, F.S.B.3
  • 19
    • 0033013965 scopus 로고    scopus 로고
    • The putative polymerase sequence of infectious salmon anemia virus suggests a new genus within the Orthomyxoviridae
    • Krossøy, B., Hordvik, I., Nilsen, F., Nylund, A. & Endresen, C. (1999). The putative polymerase sequence of infectious salmon anemia virus suggests a new genus within the Orthomyxoviridae. J Virol 73, 2136-2142.
    • (1999) J Virol , vol.73 , pp. 2136-2142
    • Krossøy, B.1    Hordvik, I.2    Nilsen, F.3    Nylund, A.4    Endresen, C.5
  • 20
    • 18744435551 scopus 로고    scopus 로고
    • Phylogenetic analysis of infectious salmon anaemia virus isolates from Norway, Canada and Scotland
    • Krossøy, B., Nilsen, F., Falk, K., Endresen, C. & Nylund, A. (2001a). Phylogenetic analysis of infectious salmon anaemia virus isolates from Norway, Canada and Scotland. Dis Aquat Organ 44, 1-6.
    • (2001) Dis Aquat Organ , vol.44 , pp. 1-6
    • Krossøy, B.1    Nilsen, F.2    Falk, K.3    Endresen, C.4    Nylund, A.5
  • 21
    • 18144440519 scopus 로고    scopus 로고
    • Cloning and identification of the infectious salmon anaemia virus haemagglutinin
    • & 7 other authors
    • Krossøy, B., Devold, M., Sanders, L. & 7 other authors (2001b). Cloning and identification of the infectious salmon anaemia virus haemagglutinin. J Gen Virol 82, 1757-1765.
    • (2001) J Gen Virol , vol.82 , pp. 1757-1765
    • Krossøy, B.1    Devold, M.2    Sanders, L.3
  • 23
    • 0001178028 scopus 로고    scopus 로고
    • Orthomyxoviridae: The viruses and their replication
    • 4th edn, Edited by D. M. Knipe & P. M. Howley. Philadelphia, PA: Lippincott Williams & Wilkins
    • Lamb, R. A. & Krug, R. M. (2001). Orthomyxoviridae: the viruses and their replication. In Fields Virology, 4th edn, vol. 1, pp. 1487-1531. Edited by D. M. Knipe & P. M. Howley. Philadelphia, PA: Lippincott Williams & Wilkins.
    • (2001) Fields Virology , vol.1 , pp. 1487-1531
    • Lamb, R.A.1    Krug, R.M.2
  • 24
    • 0026356891 scopus 로고
    • Predicting coiled coils from protein sequences
    • Lupas, A., Van Dyke, M. & Stock, J. (1991). Predicting coiled coils from protein sequences. Science 252, 1162-1164.
    • (1991) Science , vol.252 , pp. 1162-1164
    • Lupas, A.1    Van Dyke, M.2    Stock, J.3
  • 25
    • 26844529289 scopus 로고    scopus 로고
    • Susceptibility and immune responses following experimental infection of MHC compatible Atlantic salmon (Salmo salar L.) with different infectious salmon anaemia virus isolates
    • Mjaaland, S., Markussen, T., Sindre, H., Kjøglum, S., Dannevig, B. H., Larsen, S. & Grimholt, U. (2005). Susceptibility and immune responses following experimental infection of MHC compatible Atlantic salmon (Salmo salar L.) with different infectious salmon anaemia virus isolates. Arch Virol 150, 2195-2216.
    • (2005) Arch Virol , vol.150 , pp. 2195-2216
    • Mjaaland, S.1    Markussen, T.2    Sindre, H.3    Kjøglum, S.4    Dannevig B., H.5    Larsen, S.6    Grimholt, U.7
  • 26
    • 0000224995 scopus 로고
    • Sea trout as a carrier of infectious salmon anaemia virus
    • Nylund, A. & Jakobsen, P. (1995). Sea trout as a carrier of infectious salmon anaemia virus. J Fish Biol 47, 174-176.
    • (1995) J Fish Biol , vol.47 , pp. 174-176
    • Nylund, A.1    Jakobsen, P.2
  • 27
    • 0001165621 scopus 로고
    • The response of brown trout (Salmo trutta L.) to repeated challenge with infectious salmon anaemia (ISA)
    • Nylund, A., Alexandersen, S., Løvik, P. & Jakobsen, P. (1994). The response of brown trout (Salmo trutta L.) to repeated challenge with infectious salmon anaemia (ISA). Bull Eur Ass Fish Pathol 14, 167-170.
    • (1994) Bull Eur Ass Fish Pathol , vol.14 , pp. 167-170
    • Nylund, A.1    Alexandersen, S.2    Løvik, P.3    Jakobsen, P.4
  • 28
    • 0030852839 scopus 로고    scopus 로고
    • Rainbow trout (Onchorhynchus mykiss, Walbaum, 1792): A carrier of infectious salmon anaemia (ISAV)
    • Nylund, A., Kvenseth, A. M., Krossøy, B. & Hodneland, K. (1997). Rainbow trout (Onchorhynchus mykiss, Walbaum, 1792): a carrier of infectious salmon anaemia (ISAV). J Fish Dis 20, 275-279.
    • (1997) J Fish Dis , vol.20 , pp. 275-279
    • Nylund, A.1    Kvenseth, A.M.2    Krossøy, B.3    Hodneland, K.4
  • 29
    • 0141462834 scopus 로고    scopus 로고
    • Emergence and maintenance of infectious salmon anaemia virus (ISAV) in Europe: A new hypothesis
    • Nylund, A., Devold, M., Plarre, H., Isdal, E. & Aarseth, M. (2003). Emergence and maintenance of infectious salmon anaemia virus (ISAV) in Europe: a new hypothesis. Dis Aquat Organ 56, 11-24.
    • (2003) Dis Aquat Organ , vol.56 , pp. 11-24
    • Nylund, A.1    Devold, M.2    Plarre, H.3    Isdal, E.4    Aarseth, M.5
  • 30
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: An application to display phylogenetic trees on personal computers
    • Page, R. D. M. (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12, 357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 31
    • 24644435518 scopus 로고    scopus 로고
    • Prevalence of infectious salmon anaemia virus (ISAV) in wild salmonids in western Norway
    • Plarre, H., Devold, M., Snow, M. & Nylund, A. (2005). Prevalence of infectious salmon anaemia virus (ISAV) in wild salmonids in western Norway. Dis Aquat Organ 66, 71-79.
    • (2005) Dis Aquat Organ , vol.66 , pp. 71-79
    • Plarre, H.1    Devold, M.2    Snow, M.3    Nylund, A.4
  • 32
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D. & Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics 9, 817-818.
    • (1998) Bioinformatics , vol.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 33
    • 0034044313 scopus 로고    scopus 로고
    • Estimating the rate of molecular evolution: Incorporating non-contemporaneous sequences into maximum likelihood phylogenies
    • Rambaut, A. (2000). Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies. Bioinformatics 16, 395-399.
    • (2000) Bioinformatics , vol.16 , pp. 395-399
    • Rambaut, A.1
  • 34
    • 0029044113 scopus 로고
    • Do hemagglutinin genes of highly pathogenic avian influenza viruses constitute unique phylogenetic lineages?
    • Röhm, C., Horimoto, T., Kawaoka, Y., Süss, J. & Webster, R. G. (1995). Do hemagglutinin genes of highly pathogenic avian influenza viruses constitute unique phylogenetic lineages? Virology 209, 664-670.
    • (1995) Virology , vol.209 , pp. 664-670
    • Röhm, C.1    Horimoto, T.2    Kawaoka, Y.3    Süss, J.4    Webster, R.G.5
  • 35
    • 0142091594 scopus 로고    scopus 로고
    • Relative resistance of Pacific salmon to infectious salmon anaemia virus
    • Rolland, J. B. & Winton, J. R. (2003). Relative resistance of Pacific salmon to infectious salmon anaemia virus. J Fish Dis 26, 511-520.
    • (2003) J Fish Dis , vol.26 , pp. 511-520
    • Rolland, J.B.1    Winton, J.R.2
  • 36
    • 0033783032 scopus 로고    scopus 로고
    • Receptor binding and membranes fusion in virus entry: The influenza hemagglutinin
    • Skehel, J. J. & Wiley, D. C. (2000). Receptor binding and membranes fusion in virus entry: the influenza hemagglutinin. Annu Rev Biochem 69, 531-569.
    • (2000) Annu Rev Biochem , vol.69 , pp. 531-569
    • Skehel, J.J.1    Wiley, D.C.2
  • 37
    • 0035342574 scopus 로고    scopus 로고
    • Comparative susceptibility of Artic char (Salvelinus alpinus), rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta) to the Scottish isolate of infectious salmon anaemia virus
    • Snow, M., Raynard, R. S. & Bruno, D. W. (2001). Comparative susceptibility of Artic char (Salvelinus alpinus), rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta) to the Scottish isolate of infectious salmon anaemia virus. Aquaculture 196, 47-54.
    • (2001) Aquaculture , vol.196 , pp. 47-54
    • Snow, M.1    Raynard, R.S.2    Bruno, D.W.3
  • 39
    • 12144289244 scopus 로고    scopus 로고
    • Recombination resulting in virulence shift in avian influenza outbreak, Chile
    • & 11 other authors
    • Suarez, D. L., Senne, D. A., Banks, J. & 11 other authors (2004). Recombination resulting in virulence shift in avian influenza outbreak, Chile. Emerg Infect Dis 10, 693-699.
    • (2004) Emerg Infect Dis , vol.10 , pp. 693-699
    • Suarez, D.L.1    Senne, D.A.2    Banks, J.3
  • 40
    • 0004248459 scopus 로고    scopus 로고
    • PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4.0
    • Sunderland, MA: Sinauer Associates
    • Swofford, D. L. (1998). PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4.0. Sunderland, MA: Sinauer Associates.
    • (1998)
    • Swofford, D.L.1
  • 41
    • 5444234221 scopus 로고    scopus 로고
    • Genomic classification of new betanodavirus isolates by phylogenetic analysis of the coat protein gene suggests a low host-fish species specificity
    • Thiéry, R., Cozien, J., de Boisséson, C., Kerbart-Boscher, S. & Névarez, L. (2004). Genomic classification of new betanodavirus isolates by phylogenetic analysis of the coat protein gene suggests a low host-fish species specificity. J Gen Virol 85, 3079-3087.
    • (2004) J Gen Virol , vol.85 , pp. 3079-3087
    • Thiéry, R.1    Cozien, J.2    de Boisséson, C.3    Kerbart-Boscher, S.4    Névarez, L.5
  • 43
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. (1997). PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13, 555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.1
  • 44
    • 0032712272 scopus 로고    scopus 로고
    • Epidemiology and pathogenesis of influenza
    • Zambon, M. C. (1999). Epidemiology and pathogenesis of influenza. J Antimicrob Chemother 44 (Suppl. B), 3-9.
    • (1999) J Antimicrob Chemother , vol.44 , Issue.SUPPL. B , pp. 3-9
    • Zambon, M.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.