Control of function of a small peptide by a protein

Bioorganic and Medicinal Chemistry Letters

Volumn 16, Issue 15, 2006, Pages 4059-4062

  Tanaka, Fujie ^a   Fuller, Roberta ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

Amines; Enaminone; Peptide phage libraries; Peptides; Protein modifications

Indexed keywords

1,3 DIKETONE; ENAMINE; KETONE DERIVATIVE; PEPTIDE; PEPTIDE LIBRARY; PROTEIN;

ARTICLE; BACTERIOPHAGE; PROTEIN BINDING; PROTEIN FUNCTION;

AMINO ACID SEQUENCE; ELECTROSTATICS; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEINS;

EID: 33745160444     PISSN: 0960894X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bmcl.2006.05.001     Document Type: Article

References (23)

1. Kiessling L.L., Gestwicki J.E., and Strong L.E. Curr. Opin. Chem. Biol. 4 (2000) 696
2. Pearl L.H., and Barford D. Curr. Opin. Struct. Biol. 12 (2002) 761
3. Guo Z., Zhou D., and Schultz P.G. Science 288 (2000) 2042
4. Hamachi I., Eboshi R., Watanabe J., and Sinkai S. J. Am. Chem. Soc. 122 (2000) 4530
5. Tanaka T., Mizuno T., Fukui S., Hiroaki H., Oku J., Kanaori K., Tajima K., and Shirakawa M. J. Am. Chem. Soc. 126 (2004) 14023
6. Weston C.J., Cureton C.H., Calvert M.J., Smart O.S., and Allemann R.K. ChemBioChem 5 (2004) 1075
7. Allert M., and Baltzer L. Chem. Eur. J. 8 (2002) 2549
8. Broo K., Brive L., Ahlberg P., and Baltzer L. J. Am. Chem. Soc. 119 (1997) 11362
9. Johnsson K., Allemann R.K., Widmer H., and Benner S.A. Nature 365 (1993) 530
10. Tanaka F., and Barbas III C.F. Chem. Commun. (2001) 769
11. Tanaka F., and Barbas III C.F. J. Am. Chem. Soc. 124 (2002) 3510
12. Tanaka F., Fuller R., and Barbas III C.F. Biochemistry 44 (2005) 7583
13. Raines R.T. Chem. Rev. 98 (1998) 1045
14. Taylor H.C., Richardson D.C., Richardson J.S., Wlodawer A., Komoriya A., and Chaiken I.M. J. Mol. Biol. 149 (1981) 313
15. Rico M., Nieto J.L., Santoro J., Bermejo F.J., Herranz J., and Gallego E. FEBS Lett. 162 (1983) 314
16. Graziano G., Catanzano F., Giancola C., and Barone G. Biochemistry 35 (1996) 13386
17. Bastos M., Pease J.H.B., Wemmer D.E., Murphy K.P., and Connelly P.R. Proteins 42 (2001) 523
18. Marqusee S., and Baldwin R.L. Proc. Natl. Acad. Sci. U.S.A. 84 (1987) 8898
19. In: Barbas III C.F., Burton D.R., Scott J.K., and Silverman G.J. (Eds). Phage Display: A Laboratory Manual (2001), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
20. 9 except in the presence of S-protein (2 μM). {A table is presented} Oligonucleotide sequences were as follows:FT-NNK6-S-f (5′-GAGGAGGCCCAGGCGGCCNNKNNKNNKNNKNNKNNKGAGACAGCAGCCGCAAAGTTTGAG-3′), FT-S-b (5′-CTCTCTGGCCGGCCTGGCCACTATCCATCTTCTGACGCTCAAACTTTGCGGCTG-3′), FT-NNK-Pro-S-f (5′-GAGGAGGCCCAGGCGGCCNNKNNKNNKNNKNNKNNKCCAGAGACAGCAGCCGCAAAGTTTGAG-3′), FT-S-f (5′-GAGGAGGCCCAGGCGGCCAAAGAGACAGCAGCCGCAAAGTTTGAGCGTCAGAAGATGGAT-3′), FT-S-NNK6-b (5′-GGAGGCCGGCCTGGCCMNNMNNMNNMNNMNNMNNATCCATCTTCTGACGCTC-3′), FT-S-T-NNK6-b (5′-GGAGGCCGGCCTGGCCMNNMNNMNNMNNMNNMNNGCTACGAGAATCCATCTTCTGACGCTC-3′), FT-NNK6-HTH-S-l-f (5′-GGCCCAGGCGGCCNNKNNKNNKNNKNNKNNKCACTTATCTCAACCAGAGACAGCAGCCGCAAA GTTTGAG-3′), FT-NNK-HTH-S-2-f (5′-GGCCCAGGCGGCCNNKAAANNKNNKNNKCTGCACTTATCTCAACCAGAGACAGCAGCCGCAAA GTTTGAG-3′), FT-NNK-HTH-S-3-f (5′-GGCCCAGGCGGCCNNKNNKAAANNKNNKCTGCACTTATCTCAACCAGAGACAGCAGCCGCAAA GTTTGAG-3′), FT-HTH-S-b(5′-GGCCGGCCTGGCCATCCATCTTCTGACGCTCAAACTTTGCGGCTGCTG-3′).
21. Wagner J., Lerner R.A., and Barbas III C.F. Science 270 (1995) 1797
22. Barbas III C.F., Heine A., Zhong G., Hoffmann T., Gramatikova S., Bjornestsdt R., List B., Anderson L., Stura E.A., Wilson I.A., and Lerner R.A. Science 278 (1997) 2085
23. Tanaka F., Thayumanavan R., Mase N., and Barbas III C.F. Tetrahedron Lett. 45 (2004) 325