Ubiquitin-conjugating enzyme genes in Oesophagostomum dentatum

Parasitology Research

Volumn 99, Issue 2, 2006, Pages 119-125

  Cottee, Pauline A ^a   Abs El Osta, Youssef G ^a   Nisbet, Alasdair J ^b   Gasser, Robin B ^a  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b MOREDUN RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

UBIQUITIN CONJUGATING ENZYME; UBIQUITIN CONJUGATING ENZYME 2; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMAL TISSUE; ARTICLE; CAENORHABDITIS ELEGANS; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC ISOLATION BY DISTANCE; GENETIC VARIABILITY; MOLECULAR CLONING; NEMATODE; NONHUMAN; NUCLEOTIDE SEQUENCE; OESOPHAGOSTOMUM DENTATUM; ORTHOLOGY; PRIORITY JOURNAL; PROTEIN MOTIF; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS; STRONGYLOIDEA;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; COMPUTATIONAL BIOLOGY; HELMINTH PROTEINS; ISOENZYMES; MICE; MOLECULAR SEQUENCE DATA; OESOPHAGOSTOMUM; SEQUENCE ANALYSIS, DNA; UBIQUITIN-CONJUGATING ENZYMES;

CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; NEMATODA; OESOPHAGOSTOMUM DENTATUM; SACCHAROMYCES CEREVISIAE;

EID: 33745051156     PISSN: 09320113     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00436-005-0111-x     Document Type: Article

References (35)

1. Aboobaker AA, Blaxter ML (2004) Functional genomics for parasitic nematodes and platyhelminths. Trends Parasitol 20:178-184
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
3. Ash LR, Orihel TC (1987) Parasites: a guide to laboratory procedures and identification. American Society of Clinical Pathologists, Chicago, p 328
4. Boag PR, Newton SE, Gasser RB (2001) Molecular aspects of sexual development and reproduction in nematodes and schistosomes. Adv Parasitol 50:153-198
5. Boag PR, Ren P, Newton SE, Gasser RB (2003) Molecular characterisation of a male-specific serine/threonine phosphatase from Oesophagustomum dentatum (Nematoda: Strongylida), and functional characterization of homologues in Caenorhabditis elegans. Int J Parasitol 33:313-325
6. Cottee PA, Nisbet AJ, Boag PR, Larsen M, Gasser RB (2004) Characterisation of major sperm protein genes and their expression in Oesophagostomum dentatum (Nematoda: Strongylida). Parasitology 129:479-490
7. Cottee PA, Nisbet AJ, Abs EL-Osta YG, Webster TL, Gasser RB (2006) Construction of gender-enriched cDNA archives for adult Oesophagostomum dentatum by suppressive-subtractive hybridization and microarray analysis of expressed sequence tags. Parasitology (in press)
8. Daugschies A, Watzel C (1999) In vitro development of histotropic larvae of Oesophagostomum dentatum under various conditions of cultivation. Parasitol Res 85:158-161
9. Fang S, Weissmann AM (2004) A field guide to ubiquitylation. Cell Mol Life Sci 61:1546-1561
10. Frazier T, Shake D, Hota U, Boyd L (2004) Caenorhabditis elegans UBC-2 functions with the anaphase-promoting complex but also has other activities. J Cell Sci 117:5427-5435
11. Golden A, Sadler PL, Wallenfang MR, Schumacher JM, Hamill DR, Bates G, Bowerman B, Seydoux G, Shakes DC (2000) Metaphase to anaphase (mat) transition-defective mutants in Caenorhabditis elegans. J Cell Biol 151:1469-1482
12. Gudgen M, Chandrasekaran A, Fraizer T, Boyd L (2004) Interactions within the ubiquitin pathway of Caenorhabditis elegans. Biochem Biophys Res Commun 325:479-486
13. Haas AL, Siepmann TJ (1997) Pathways of ubiquitin conjugation. FASEB J 11:1257-1268
14. Hartmann-Petersen R, Seeger M, Gordon C (2003) Transferring substrates to the 26S proteasome. Trends Biochem Sci 28:26-31
15. Haupt W (1966) Ein Beitrag zur Morphologie der Knöetchenwüermer des Hausschweines, ihrer Eier sowie der dritten invasion-stüechtigen Larvenstadien. Arch Exp Vet Med 20:701-711
16. Hussein AS, Harel M, Selkirk ME (2002) A distinct family of acetylcholinesterases is secreted by Nippostrongylus brasiliensis. Mol Biochem Parasitol 123:125-134
17. Islam MK, Miyoshi T, Yamada M, Tsuji N (2005) Pyrophosphatase of the roundworm Ascaris suum plays an essential role in the worm's molting and development. Infect Immun 73:1995-2004
18. Issa Z, Grant WN, Stasiuk S, Shoemaker CB (2005) Development of methods for RNA interference in the sheep gastrointestinal parasite, Trichostrongylus colubriformis. Int J Parasitol 35:935-940
19. Jones D, Crowe E, Stevens TA, Candido EPM (2004) Functional and phylogenetic analysis of the ubiquitylation system in Caenorhabditis elegans: ubiquitin-conjugating enzymes, ubiquitin-activating enzymes, and ubiquitin-like proteins. Genome Biol 3(1):research0002.1-research0002.15
20. Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421:231-237
21. 3 molting. Mol Biochem Parasitol 138:165-170
22. Miller J, Gordon C (2003) The regulation of proteasome degradation by multi-ubiquitin chain binding proteins. FEBS Lett 579:3224-3230
23. Pickart C (1997) Targeting of substrates to the 26S proteasome. FASEB J 11:1055-1066
24. Roos-Mattjus P, Sistonen L (2004) The ubiquitin-proteasome pathway. Ann Med 36:285-295
25. Rual JF, Ceron J, Koreth J, Hao T, Nicot AS, Hirozane-Kishikawa T, Vandenhaute J, Orkin SH, Hill DE, van den Heuvel S, Vidal M (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14:2162-2168
26. Schnell J, Hinke L (2003) Non traditional functions of ubiquitin and ubiquitin-binding proteins. J Biol Chem 258:35857-35860
27. Seufert W, Jentsch S (1990) Ubiquitin-conjugating enzymes UBC4 and UBC-5 mediate selective degradation of short-lived and abnormal proteins. EMBO J 9:543-550
28. Simmer F, Moorman C, van der Linden AM, Kuijk E, van den Berghe PV, Kamath RS, Fraser AG, Ahringer J, Plasterk RH (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1:77-84
29. Slotved HC, Barnes EH, Bjørn H, Christensen CM, Eriksen L, Roepstorff A, Nansen P (1996) Recovery of Oesophagostomum dentatum from pigs by isolation of parasites migrating from large intestinal contents embedded in agar-gel. Vet Parasitol 63:237-245
30. Sonnichsen B, Koski LB, Walsh A, Marschall P, Neumann B, Brehm M, Alleaume AM, Artelt J, Bettencourt P, Cassin E, Hewitson M, Holz C, Khan M, Lazik S, Martin C, Nitzsche B, Ruer M, Stamford J, Winzi M, Heinkel R, Roder M, Finell J, Hantsch H, Jones SJ, Jones M, Piano F, Gunsalus KC, Oegema K, Gonczy P, Coulson A, Hyman AA, Echeverri CJ (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434:462-469
31. Talvik H, Christensen CM, Joachim A, Roepstorff A, Bjørn H, Nansen P (1997) Prepatent periods of different Oesophagostomum spp. isolates in experimentally infected pigs. Parasitol Res 83:563-568
32. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
33. Treier M, Seufert W, Jentsch S (1992) Drosophila UbcD1 encodes a highly conserved ubiquitin-conjugating enzyme involved in selective protein degradation. EMBO J 11:367-372
34. Watanabe TK, Kawai A, Fujiwara T, Maekawa H, Hirai Y, Nakamura Y, Takahashi E (1996) Molecular cloning of UBE2G, encoding a human skeletal muscle-specific ubiquitin-conjugating enzyme homologus to UBC7 of C. elegans. Cytogenet Cell Genet 74:146-148
35. Zhen M, Heinlein R, Jones D, Jentsch S, Candido EPM (1993) The ubc-2 gene of Caenorhabditis elegans encodes an ubiquitin-conjugating enzyme involved in selective protein degradation. Mol Cell Biol 13:1371-1377