메뉴 건너뛰기




Volumn 88, Issue 5, 2006, Pages 431-435

Editing of the grapevine mitochondrial cytochrome b mRNA and molecular modeling of the protein

Author keywords

Cytochrome b; Mitochondria; Molecular modeling; RNA editing; Vitis vinifera L.

Indexed keywords

AMINO ACID; CYTOCHROME B; MEMBRANE PROTEIN; MESSENGER RNA; MITOCHONDRIAL MESSENGER RNA; MITOCHONDRIAL PROTEIN;

EID: 33744978123     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2005.10.003     Document Type: Article
Times cited : (3)

References (28)
  • 2
    • 0025194064 scopus 로고
    • 1 complexes of microorganisms
    • 1 complexes of microorganisms. Microbiol. Rev. 54 (1990) 101-129
    • (1990) Microbiol. Rev. , vol.54 , pp. 101-129
    • Trumpower, B.L.1
  • 3
    • 0037022594 scopus 로고    scopus 로고
    • 1 complex with its bound substrate cytochrome c
    • 1 complex with its bound substrate cytochrome c. Proc. Natl. Acad. Sci. USA 99 (2002) 2800-2805
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 2800-2805
    • Lange, C.1    Hunte, C.2
  • 6
    • 0023672581 scopus 로고
    • Creation of AUG initiation codons by addition of uridines within cytochrome b transcripts of kinetoplastids
    • Feagin J.E., Shaw J.M., Simpson L., and Stuart K. Creation of AUG initiation codons by addition of uridines within cytochrome b transcripts of kinetoplastids. Proc. Natl. Acad. Sci. USA 85 (1988) 539-543
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 539-543
    • Feagin, J.E.1    Shaw, J.M.2    Simpson, L.3    Stuart, K.4
  • 7
    • 0025341877 scopus 로고
    • RNA editing in the cytochrome b locus of the higher plant Oenothera berteriana includes a U to C transition
    • Schuster W., Hiesel R., Wissinger B., and Brennicke A. RNA editing in the cytochrome b locus of the higher plant Oenothera berteriana includes a U to C transition. Mol. Cell. Biol. 10 (1990) 2428-2431
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 2428-2431
    • Schuster, W.1    Hiesel, R.2    Wissinger, B.3    Brennicke, A.4
  • 9
    • 2142734908 scopus 로고    scopus 로고
    • Organization of the repetitive DNAs and the genomic regions carrying ribosomal RNA, cob, and atp9 genes in the cucurbita mitochondrial genomes
    • Bartoszewski G., Katzir N., and Havey M.J. Organization of the repetitive DNAs and the genomic regions carrying ribosomal RNA, cob, and atp9 genes in the cucurbita mitochondrial genomes. Theor. Appl. Genet. 108 (2004) 982-992
    • (2004) Theor. Appl. Genet. , vol.108 , pp. 982-992
    • Bartoszewski, G.1    Katzir, N.2    Havey, M.J.3
  • 10
    • 0029802498 scopus 로고    scopus 로고
    • RNA editing of transcripts of the gene for apocytochrome b (cob) in rice mitochondria
    • Ito Y., Nakazono M., Kadowaki K., Tsutsumi N., and Hirai A. RNA editing of transcripts of the gene for apocytochrome b (cob) in rice mitochondria. Genes Genet. Syst. 71 (1996) 85-89
    • (1996) Genes Genet. Syst. , vol.71 , pp. 85-89
    • Ito, Y.1    Nakazono, M.2    Kadowaki, K.3    Tsutsumi, N.4    Hirai, A.5
  • 11
    • 0027375504 scopus 로고
    • RNA editing of apocytochrome b (cob) transcripts in mitochondria from two genera of plants
    • Zanlungo S., Begu D., Quinones V., Araya A., and Jordana X. RNA editing of apocytochrome b (cob) transcripts in mitochondria from two genera of plants. Curr. Genet. 24 (1993) 344-348
    • (1993) Curr. Genet. , vol.24 , pp. 344-348
    • Zanlungo, S.1    Begu, D.2    Quinones, V.3    Araya, A.4    Jordana, X.5
  • 12
    • 0029804651 scopus 로고    scopus 로고
    • Control of gene expression by base deamination: the case of RNA editing in wheat mitochondria
    • Blanc V., Jordana X., Litvak S., and Araya A. Control of gene expression by base deamination: the case of RNA editing in wheat mitochondria. Biochimie 78 (1996) 511-517
    • (1996) Biochimie , vol.78 , pp. 511-517
    • Blanc, V.1    Jordana, X.2    Litvak, S.3    Araya, A.4
  • 13
    • 0033592907 scopus 로고    scopus 로고
    • RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs
    • Giegé P., and Brennicke A. RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs. Proc. Natl. Acad. Sci. USA 96 (1999) 15324-15329
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 15324-15329
    • Giegé, P.1    Brennicke, A.2
  • 14
    • 0344442430 scopus 로고    scopus 로고
    • The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana
    • Handa H. The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic Acids Res. 31 (2003) 5907-5916
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5907-5916
    • Handa, H.1
  • 15
    • 21344498791 scopus 로고
    • A sample and efficient method for DNA extraction from grapevine cultivars and Vitis species
    • Lodhi M.A., Ye G.N., Weeden N.F., and Reisch B.I. A sample and efficient method for DNA extraction from grapevine cultivars and Vitis species. Plant Mol. Biol. Rep. 12 (1994) 6-13
    • (1994) Plant Mol. Biol. Rep. , vol.12 , pp. 6-13
    • Lodhi, M.A.1    Ye, G.N.2    Weeden, N.F.3    Reisch, B.I.4
  • 17
    • 0001194274 scopus 로고
    • A method for extracting intact RNA from fruits rich in polysaccharides using ripe mango mesocarp
    • López-Gómez R., and Gómez-Lim M.A. A method for extracting intact RNA from fruits rich in polysaccharides using ripe mango mesocarp. HortScience 27 (1992) 440-442
    • (1992) HortScience , vol.27 , pp. 440-442
    • López-Gómez, R.1    Gómez-Lim, M.A.2
  • 18
    • 0042622380 scopus 로고    scopus 로고
    • SWISS-MODEL: an automated protein homology-modeling server
    • Schwede T., Kopp J., Guex N., and Peitsch M.C. SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res. 31 (2003) 3381-3385
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3381-3385
    • Schwede, T.1    Kopp, J.2    Guex, N.3    Peitsch, M.C.4
  • 20
    • 0030053370 scopus 로고    scopus 로고
    • ProMod and Swiss-Model: internet-based tools for automated comparative protein modeling
    • Peitsch M.C. ProMod and Swiss-Model: internet-based tools for automated comparative protein modeling. Biochem. Soc. Trans. 24 (1996) 274-279
    • (1996) Biochem. Soc. Trans. , vol.24 , pp. 274-279
    • Peitsch, M.C.1
  • 21
    • 84889120137 scopus 로고
    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones T.A., Zou J.Y., Cowan S.W., and Kjelgard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. 47A (1991) 110-119
    • (1991) Acta Crystallogr. , vol.47 A , pp. 110-119
    • Jones, T.A.1    Zou, J.Y.2    Cowan, S.W.3    Kjelgard, M.4
  • 22
    • 0026244229 scopus 로고
    • MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
    • Kraulis P.J. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24 (1991) 946-950
    • (1991) J. Appl. Crystallogr. , vol.24 , pp. 946-950
    • Kraulis, P.J.1
  • 23
    • 0030815133 scopus 로고    scopus 로고
    • Raster3D: photorealistic molecular graphics
    • Merrit E.A., and Bacon D.J. Raster3D: photorealistic molecular graphics. Methods Enzymol. 277 (1997) 505-524
    • (1997) Methods Enzymol. , vol.277 , pp. 505-524
    • Merrit, E.A.1    Bacon, D.J.2
  • 24
    • 0026228756 scopus 로고
    • Isolation and nucleotide sequence of the potato mitochondrial gene for apocytochrome b
    • Zanlungo S., Litvak S., and Jordana X. Isolation and nucleotide sequence of the potato mitochondrial gene for apocytochrome b. Plant Mol. Biol. 17 (1991) 527-530
    • (1991) Plant Mol. Biol. , vol.17 , pp. 527-530
    • Zanlungo, S.1    Litvak, S.2    Jordana, X.3
  • 25
    • 0001938909 scopus 로고    scopus 로고
    • Plant organelle gene expression: altered by RNA editing
    • Hanson M.R., Sutton C.A., and Lu B. Plant organelle gene expression: altered by RNA editing. Trends Plant Sci. 1 (1996) 57-64
    • (1996) Trends Plant Sci. , vol.1 , pp. 57-64
    • Hanson, M.R.1    Sutton, C.A.2    Lu, B.3
  • 26
    • 0035100634 scopus 로고    scopus 로고
    • From gene to protein in higher plant mitochondria, C. R. l'Academie. Sci
    • Giegé P., and Brennicke A. From gene to protein in higher plant mitochondria, C. R. l'Academie. Sci. Ser. III 324 (2001) 209-217
    • (2001) Ser. III , vol.324 , pp. 209-217
    • Giegé, P.1    Brennicke, A.2
  • 28
    • 0022412192 scopus 로고
    • Hydrophobicity of amino acid residues in globular proteins
    • Rose G., Geselowitz A., Lesser G., Lee R., and Zehfus M. Hydrophobicity of amino acid residues in globular proteins. Science 229 (1985) 834-838
    • (1985) Science , vol.229 , pp. 834-838
    • Rose, G.1    Geselowitz, A.2    Lesser, G.3    Lee, R.4    Zehfus, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.