Novel DNA binding by a basic helix-loop-helix protein: The role of the Dioxin Receptor PAS domain

Journal of Biological Chemistry

Volumn 281, Issue 18, 2006, Pages 12535-12545

  Chapman Smith, Anne ^a   Whitelaw, Murray L ^a  

^a UNIVERSITY OF ADELAIDE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; DIMERIZATION; GENETIC ENGINEERING; HUMAN ENGINEERING; PIGMENTS; PROTEINS;

DIMERIC TRANSCRIPTION; DNA BINDING; HELIX-LOOP-HELIX PROTEIN; PER-ARNT-SIM HOMOLOGY (PAS);

DNA;

AROMATIC HYDROCARBON RECEPTOR; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR; CURVED DNA; DEOXYRIBONUCLEASE I; HELIX LOOP HELIX PROTEIN; HETERODIMER; MAX PROTEIN; MYC PROTEIN; NUCLEIC ACID BINDING PROTEIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ARTICLE; DIMERIZATION; DNA BINDING; DNA FOOTPRINTING; DNA SEQUENCE; E BOX ELEMENT; ESCHERICHIA COLI; NONHUMAN; PLASMID; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN INTERACTION; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR; BASE SEQUENCE; BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTORS; DNA; HUMANS; LEUCINE; MICE; MOLECULAR SEQUENCE DATA; PROTO-ONCOGENE PROTEINS C-MYC; RECEPTORS, ARYL HYDROCARBON; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 33744959841     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M512145200     Document Type: Article

References (45)

1. Massari, M. E., and Murre, C. (2000) Mol. Cell. Biol. 20, 429-440
2. Taylor, B. L., and Zhulin, I. B. (1999) Microbiol. Mol. Biol. Rev. 63, 479-506
3. Crews, S. T. (1998) Genes Dev. 12, 607-620
4. Crews, S. T., and Fan, C. M. (1999) Curr. Opin. Genet. Dev. 9, 580-587
5. Kewley, R. J., Whitelaw, M. L., and Chapman-Smith, A. (2004) Int. J. Biochem. Cell Biol. 36, 189-204
6. Pongratz, I., Antonsson, C., Whitelaw, M. L., and Poellinger, L. (1998) Mol. Cell. Biol. 18, 4079-4088
7. Lindebro, M. C., Poellinger, L., and Whitelaw, M. L. (1995) EMBO J. 14, 3528-3539
8. Reisz-Porszasz, S., Probst, M. R., Fukunaga, B. N., and Hankinson, O. (1994) Mol. Cell. Biol. 14, 6075-6086
9. Chapman-Smith, A., Lutwyche, J. K., and Whitelaw, M. L. (2004) J. Biol. Chem. 279, 5353-5362
10. Dolwick, K. M., Swanson, H. I., and Bradfield, C. A. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 8566-8570
11. Ellenberger, T., Fass, D., Arnaud, M., and Harrison, S. C. (1994) Genes Dev. 8, 970-980
12. Ferre-D'Amare, A. R., Prendergast, G. C., Ziff, E. B., and Burley, S. K. (1993) Nature 363, 38-45
13. Ferre-D'Amare, A. R., Pognonec, P., Roeder, R. G., and Burley, S. K. (1994) EMBO J. 13, 180-189
14. Nair, S. K., and Burley, S. K. (2003) Cell 112, 193-205
15. Rishi, V., Gal, J., Krylov, D., Fridriksson, J., Boysen, M. S., Mandrup, S., and Vinson, C. (2004) J. Biol. Chem. 279, 11863-11874
16. Sun, W., Zhang, J., and Hankinson, O. (1997) J. Biol. Chem. 272, 31845-31854
17. Numayama-Tsuruta, K., Kobayashi, A., Sogawa, K., and Fujii-Kuriyama, Y. (1997) Eur. J. Biochem. 246, 486-495
18. Antonsson, C., Whitelaw, M. L., McGuire, J., Gustafsson, J. A., and Poellinger, L. (1995) Mol. Cell. Biol. 15, 756-765
19. Kholod, N., and Mustelin, T. (2001) BioTechniques 31, 322-323, 326-328
20. Fieber, W., Schneider, M. L., Matt, T., Krautler, B., Konrat, R., and Bister, K. (2001) J. Mol. Biol. 307, 1395-1410
21. Mason, G., Witte, A., Whitelaw, M., Antonsson, C., McGuire, J., Wilhelmsson, A., Poellinger, L., and Gustafsson, J. (1994) J. Biol. Chem. 269, 4438-4449
22. Yindeeyoungyeon, W., and Schell, M. A. (2000) BioTechniques 29, 1032-1041
23. Pellequer, J. L., Wager-Smith, K. A., Kay, S. A., and Getzoff, E. D. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 5884-5890
24. Borgstahl, G. E., Williams, D. R., and Getzoff, E. D. (1995) Biochemistry 34, 6278-6287
25. McGuire, J., Okamoto, K., Whitelaw, M. L., Tanaka, H., and Poellinger, L. (2001) J. Biol. Chem. 276, 41841-41849
26. Yildiz, O., Doi, M., Yujnovsky, I., Cardone, L., Berndt, A., Hennig, S., Schulze, S., Urbanke, C., Sassone-Corsi, P., and Wolf, E. (2005) Mol. Cell 17, 69-82
27. Dong, Q., Blatter, E. E., Ebright, Y. W., Bister, K., and Ebright, R. H. (1994) EMBO J. 13, 200-204
28. Dove, S. L., and Hochschild, A. (1998) Genes Dev. 12, 745-754
29. Joung, J. K., Ramm, E. I., and Pabo, C. O. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 7382-7387
30. Bacsi, S. G., and Hankinson, O. (1996) J. Biol. Chem. 271, 8843-8850
31. Fukunaga, B. N., and Hankinson, O. (1996) J. Biol. Chem. 271, 3743-3749
32. Watson, A. J., and Hankinson, O. (1992) J. Biol. Chem. 267, 6874-6878
33. Dyson, H. J., and Wright, P. E. (2002) Curr. Opin. Struct. Biol. 12, 54-60
34. Molkentin, J. D., Black, B. L., Martin, J. F., and Olson, E. N. (1996) Mol. Cell. Biol. 16, 2627-2636
35. Santelli, E., and Richmond, T. J. (2000) J. Mol. Biol. 297, 437-449
36. Khorasanizadeh, S., and Rastinejad, F. (2001) Trends Biochem. Sci 26, 384-390
37. Kumar, R., and Thompson, E. B. (2005) J. Steroid Biochem. Mol. Biol. 94, 383-394
38. Denison, M. S., Fisher, J. M., and Whitlock, J. P., Jr. (1989) J. Biol. Chem. 264, 16478-16482
39. Yao, E. F., and Denison, M. S. (1992) Biochemistry 31, 5060-5067
40. Swanson, H. I., Chan, W. K., and Bradfield, C. A. (1995) J. Biol. Chem. 270, 26292-26302
41. Elferink, C. J., and Whitlock, J. P., Jr. (1990) J. Biol. Chem. 265, 5718-5721
42. Love, J. J., Li, X., Case, D. A., Giese, K., Grosschedl, R., and Wright, P. E. (1995) Nature 376, 791-795
43. Lomvardas, S., and Thanos, D. (2001) Cell 106, 685-696
44. Zelzer, E., Wappner, P., and Shilo, B. Z. (1997) Genes Dev. 11, 2079-2089
45. Cohen, S. L., Ferre-D'Amare, A. R., Burley, S. K., and Chait, B. T. (1995) Protein Sci. 4, 1088-1099