메뉴 건너뛰기




Volumn 13, Issue 3, 2006, Pages 289-301

An XML-based System for Synthesis of Data from Disparate Databases

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER SYSTEM; DATA BASE; GENOMICS; GENOTYPE PHENOTYPE CORRELATION; IMAGERY; INFORMATION PROCESSING; MEDICAL RESEARCH; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PROTEOMICS; SINGLE NUCLEOTIDE POLYMORPHISM; ANIMAL; COMPUTER LANGUAGE; CORONARY ARTERY DISEASE; FEMALE; GENETIC DATABASE; GENETICS; GENOTYPE; HAPLOTYPE; HUMAN; INFORMATION RETRIEVAL; PHENOTYPE; PHYLOGENY; SYSTEM ANALYSIS;

EID: 33744465239     PISSN: 10675027     EISSN: None     Source Type: Journal    
DOI: 10.1197/jamia.M1848     Document Type: Article
Times cited : (8)

References (54)
  • 1
    • 0242609109 scopus 로고    scopus 로고
    • Nonsyndromic seizure disorders: epilepsy and the use of the Internet to advance research
    • Leppert M., and Singh N.A. Nonsyndromic seizure disorders: epilepsy and the use of the Internet to advance research. Annu Rev Genomics Hum Genet 4 (2003) 437-457
    • (2003) Annu Rev Genomics Hum Genet , vol.4 , pp. 437-457
    • Leppert, M.1    Singh, N.A.2
  • 2
    • 33748692552 scopus 로고    scopus 로고
    • GenBank. 2005. Available at: http://www.ncbi.nlm.nih.gov/Genbank/. Accessed March 2006.
  • 3
    • 33748693377 scopus 로고    scopus 로고
    • The Jackson Laboratory. 2005. Available at: http://www.jax.org/. Accessed March 2006.
  • 4
    • 33748681358 scopus 로고    scopus 로고
    • The Mouse Phenome Databases. 2005. Available at: http://www.jax.org/phenome/. Accessed March 2006.
  • 5
    • 0141456367 scopus 로고    scopus 로고
    • Mouse Phenome Project: understanding human biology through mouse genetics and genomics
    • Bogue M. Mouse Phenome Project: understanding human biology through mouse genetics and genomics. J Appl Physiol 95 (2003) 1335-1337
    • (2003) J Appl Physiol , vol.95 , pp. 1335-1337
    • Bogue, M.1
  • 8
    • 0026870271 scopus 로고
    • Parallel database systems: the future of high performance database systems. communications of the ACM
    • DeWitt D., and Gray J. Parallel database systems: the future of high performance database systems. communications of the ACM. Communications of the ACM 35 (1992) 85-98
    • (1992) Communications of the ACM , vol.35 , pp. 85-98
    • DeWitt, D.1    Gray, J.2
  • 9
    • 0000500922 scopus 로고    scopus 로고
    • The state of the art in distributed query processing
    • Kossman D. The state of the art in distributed query processing. ACM Comput Surv 32 (2000) 422-469
    • (2000) ACM Comput Surv , vol.32 , pp. 422-469
    • Kossman, D.1
  • 10
    • 0000846198 scopus 로고    scopus 로고
    • Distributed and parallel database systems
    • Ozsu M.T., and Valduriez P. Distributed and parallel database systems. ACM Comput Surv 28 (1996) 125-128
    • (1996) ACM Comput Surv , vol.28 , pp. 125-128
    • Ozsu, M.T.1    Valduriez, P.2
  • 11
    • 33748697053 scopus 로고    scopus 로고
    • Alagic S, Bernstein PA. A model theory for generic schema management. In: Proceedings of the 8th Biennial Workshop on Data Bases and Programming Languages (DBPL '01). Frascati, Rome; 2001.
  • 12
    • 1142303690 scopus 로고    scopus 로고
    • Melnik S, Rahm E, Bernstein PA. Rondo: a programming platform for generic model management. In: Proceedings of SIGMOD; 2003.
  • 13
    • 33748691461 scopus 로고    scopus 로고
    • Newhouse S, Mayer A, Furmento N, McGough S, Stanton J, Darlington J. Laying the foundations for the semantic grid. In: Proceedings of the AISB '02 Symposium on AI and GRID Computing; 2002.
  • 14
    • 84941264225 scopus 로고    scopus 로고
    • A model-based mediator system for scientific data management
    • Critchlow T., and Lacroix Z. (Eds), Morgan Kaufmann, San Francisco
    • Ludäscher B., Gupta A., and Martone M. A model-based mediator system for scientific data management. In: Critchlow T., and Lacroix Z. (Eds). Bioinformatics: managing scientific data (2003), Morgan Kaufmann, San Francisco 335-370
    • (2003) Bioinformatics: managing scientific data , pp. 335-370
    • Ludäscher, B.1    Gupta, A.2    Martone, M.3
  • 16
  • 17
    • 0036601844 scopus 로고    scopus 로고
    • Grid services for distributed system integration
    • Foster I., Kesselman C., Nick J., and Tuecke S. Grid services for distributed system integration. Computer 35 (2002) 37-46
    • (2002) Computer , vol.35 , pp. 37-46
    • Foster, I.1    Kesselman, C.2    Nick, J.3    Tuecke, S.4
  • 18
    • 33748713698 scopus 로고    scopus 로고
    • Foster I, Kesselman C, Nick JM, Tuecke S. The physiology of the Grid: an open grid services architecture for distributed systems integration: Open Grid Service Infrastructure Working Group Technical Report, Global Grid Forum; 2002. Available from: http://www.globus.org/ogsa/. Accessed March 2006.
  • 19
    • 33748697255 scopus 로고    scopus 로고
    • GGF. Global Grid Forum. 2005. Available at: http://www.gridforum.org. Accessed March 2006.
  • 22
    • 0344083387 scopus 로고    scopus 로고
    • Smith J, Gounaris A, Watson P, Paton NW, Fernandes AA, Sakellariou R. Distributed query processing on the Grid. In: Proceedings of the Third Workshop on Grid Computing (GRID2002), Baltimore, MD, 2003.
  • 24
    • 0141682128 scopus 로고    scopus 로고
    • Database Support for data-driven scientific applications in the Grid
    • Narayanan S., Kurc T., Catalyurek U., and Saltz J. Database Support for data-driven scientific applications in the Grid. Parallel Process Lett 13 (2003) 245-273
    • (2003) Parallel Process Lett , vol.13 , pp. 245-273
    • Narayanan, S.1    Kurc, T.2    Catalyurek, U.3    Saltz, J.4
  • 25
    • 33748693573 scopus 로고    scopus 로고
    • Atkinson MP, Dialani V, Guy L, Narang I, Paton NW, Pearson D, et al. Grid database access and integration: requirements and functionalities: technical document, Global Grid Forum, 2002. Available at: http://www.cs.man.ac.uk/grid-db/documents.html. Accessed March 2006.
  • 27
    • 33748702765 scopus 로고    scopus 로고
    • SPIN. Shared Pathology Informatics Network. 2002. Available at: http://www.cancerdiagnosis.nci.nih.gov/spin/. Accessed March 2006.
  • 29
    • 33748682597 scopus 로고    scopus 로고
    • Rogulin D, Estrella F, Hauer T, McClatchey R, Amendolia SR, Solomonides A. A grid information infrastructure for medical image analysis. In: Proceedings of the Distributed Databases and Processing in Medical Image Computing Workshop (DiDaMIC-2004); 2004.
  • 30
    • 33748686219 scopus 로고    scopus 로고
    • Tweed T, Miguet S. Medical Image Database on the Grid: Strategies for Data Distribution. In: HealthGrid '03. Lyon, France: European Commission, DG Information Society, 2003, pp. 152-62.
  • 31
    • 33748712311 scopus 로고    scopus 로고
    • Hastings S, Langella S, Oster S, Saltz J. Distributed data management and integration: the Mobius Project. In: Proceedings of the Global Grid Forum 11 (GGF11) Semantic Grid Applications Workshop Honolulu: Global Grid Forum, 2004.
  • 32
    • 20444431879 scopus 로고    scopus 로고
    • Langella S, Hastings S, Oster S, Kurc T, Catalyurek U, Saltz J. A distributed data management middleware for data-driven application systems. In: Proceedings of the 2004 IEEE International Conference on Cluster Computing (Cluster 2004). San Diego: IEEE Computer Society, 2004.
  • 33
    • 33748689603 scopus 로고    scopus 로고
    • DAIS. Database Access and Integration Services Working Group. 2002. Available at: http://www.cs.man.ac.uk/grid-db/. Accessed March 2006.
  • 34
    • 33745126792 scopus 로고    scopus 로고
    • Hastings S, Kurc T, Langella S, Catalyurek U, Saltz J. Image processing for the grid: a toolkit for building Grid-enabled image processing applications. In: Proceedings of the IEEE International Symposium on Cluster Computing and the Grid (CCGRID 2003); Tokyo, Japan: IEEE Computer Society, 2003.
  • 36
    • 0035827344 scopus 로고    scopus 로고
    • In silico mapping of complex disease-related traits in mice
    • Grupe A., Germer S., Usuka J., Aud D., Belknap J.K., Kelin R.F., et al. In silico mapping of complex disease-related traits in mice. Science 292 (2001) 1915-1918
    • (2001) Science , vol.292 , pp. 1915-1918
    • Grupe, A.1    Germer, S.2    Usuka, J.3    Aud, D.4    Belknap, J.K.5    Kelin, R.F.6
  • 37
    • 7444225272 scopus 로고    scopus 로고
    • In silico genetics: Identification of a functional element regulating H2-Ealpha gene expression
    • Liao G., Wang J., Guo J., Allard J., Cheng J., Ng A., et al. In silico genetics: Identification of a functional element regulating H2-Ealpha gene expression. Science 306 (2004) 690-695
    • (2004) Science , vol.306 , pp. 690-695
    • Liao, G.1    Wang, J.2    Guo, J.3    Allard, J.4    Cheng, J.5    Ng, A.6
  • 38
    • 20044394908 scopus 로고    scopus 로고
    • Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse
    • Pletcher M.T., McClurg P., Batalov S., Su A.I., and Barnes S.W. Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse. PLoS Biol 2 (2004) e393
    • (2004) PLoS Biol , vol.2
    • Pletcher, M.T.1    McClurg, P.2    Batalov, S.3    Su, A.I.4    Barnes, S.W.5
  • 40
    • 0034507639 scopus 로고    scopus 로고
    • Complex trait analysis in the mouse: the strengths, the limitations and the promise yet to come
    • Moore K., and Nagle D. Complex trait analysis in the mouse: the strengths, the limitations and the promise yet to come. Annu Rev Genet 34 (2000) 653-686
    • (2000) Annu Rev Genet , vol.34 , pp. 653-686
    • Moore, K.1    Nagle, D.2
  • 41
    • 0027275449 scopus 로고
    • Plasma cholesteryl ester transfer protein
    • Tall A.R. Plasma cholesteryl ester transfer protein. J Lipid Res 34 (1993) 1255-1274
    • (1993) J Lipid Res , vol.34 , pp. 1255-1274
    • Tall, A.R.1
  • 42
    • 0022203256 scopus 로고
    • Phylogenies and the comparative method
    • Felsenstein J. Phylogenies and the comparative method. Am Nat 125 (1985) 1-15
    • (1985) Am Nat , vol.125 , pp. 1-15
    • Felsenstein, J.1
  • 43
    • 33748694574 scopus 로고    scopus 로고
    • POY. Available at: http://research.amnh.org/scicomp/projects/poy.php. Accessed March 2006.
  • 44
    • 0000989477 scopus 로고
    • A method for testing the correlated evolution of two binary characters: are gains or losses concentrated on certain branches of a phylogenetic tree?
    • Maddison W. A method for testing the correlated evolution of two binary characters: are gains or losses concentrated on certain branches of a phylogenetic tree?. Evolution 44 (1990) 539-557
    • (1990) Evolution , vol.44 , pp. 539-557
    • Maddison, W.1
  • 45
    • 33748680365 scopus 로고    scopus 로고
    • Mouse Genome Informatics. 2005. Available at: http://www.informatics.jax.org. Accessed March 2006.
  • 46
    • 0142087920 scopus 로고    scopus 로고
    • Genetic models in applied physiology: invited review: identifying new mouse models of cardiovascular disease: a review of high-throughput screens of mutagenized and inbred strains
    • Svenson K.L., Bogue M.A., and Peters L.L. Genetic models in applied physiology: invited review: identifying new mouse models of cardiovascular disease: a review of high-throughput screens of mutagenized and inbred strains. J Appl Physiol 94 (2003) 1650-1659
    • (2003) J Appl Physiol , vol.94 , pp. 1650-1659
    • Svenson, K.L.1    Bogue, M.A.2    Peters, L.L.3
  • 47
    • 33748676517 scopus 로고    scopus 로고
    • Goloboff P, Nixon, K, Farris S. TNT. 2005. Available at: http://www.zmuc.dk/public/phylogeny/TNT/. Accessed March 2006.
  • 48
    • 33748692767 scopus 로고    scopus 로고
    • Maddison DR, Maddison WP. MacClade. 2003. Available at: http://www.macclade.org/index.html. Accessed March 2006.
  • 49
    • 15944376562 scopus 로고    scopus 로고
    • Strategies for mapping and cloning quantitative trait genes in rodents
    • Flint J., Valdar W., Shifman S., and Mott R. Strategies for mapping and cloning quantitative trait genes in rodents. Nat Rev Genet 6 (2005) 271-286
    • (2005) Nat Rev Genet , vol.6 , pp. 271-286
    • Flint, J.1    Valdar, W.2    Shifman, S.3    Mott, R.4
  • 50
    • 33748687054 scopus 로고    scopus 로고
    • MGI Data and Statistics Reports. 2005. Available at: ftp://ftp.informatics.jax.org/pub/reports/index.html. Accessed March 2006.
  • 51
    • 0029932585 scopus 로고    scopus 로고
    • Mouse liver nicotinamide n-methyltransferase pharmacogenetics: biochemical properties and variation in activity among inbred strains
    • Scheller T., Orgacka H., Szumlanski C.L., and Weinshilboum R.M. Mouse liver nicotinamide n-methyltransferase pharmacogenetics: biochemical properties and variation in activity among inbred strains. Pharmacogenetics 6 (1996) 43-53
    • (1996) Pharmacogenetics , vol.6 , pp. 43-53
    • Scheller, T.1    Orgacka, H.2    Szumlanski, C.L.3    Weinshilboum, R.M.4
  • 52
    • 0025058295 scopus 로고
    • Human liver nicotinamide n-methyltransferase: ion-pairing radiochemical assay, biochemical properties and individual variation
    • Rini J., Szumlanski C., Guerciolini R., and Weinshilboum R.M. Human liver nicotinamide n-methyltransferase: ion-pairing radiochemical assay, biochemical properties and individual variation. Clin Chim Acta 186 (1990) 359-374
    • (1990) Clin Chim Acta , vol.186 , pp. 359-374
    • Rini, J.1    Szumlanski, C.2    Guerciolini, R.3    Weinshilboum, R.M.4
  • 53
    • 21044434160 scopus 로고    scopus 로고
    • A genomewide exploration suggests a new candidate gene at chromosome 11q23 as the major determinant of plasma homocysteine levels: results from the GAIT project
    • Souto J.C., Blanco-Vaca F., Soria J.M., Buil A., Almasy L., Ordonez-Llanos J.J.M.M.-C., et al. A genomewide exploration suggests a new candidate gene at chromosome 11q23 as the major determinant of plasma homocysteine levels: results from the GAIT project. Am J Hum Genet 76 (2005) 925-933
    • (2005) Am J Hum Genet , vol.76 , pp. 925-933
    • Souto, J.C.1    Blanco-Vaca, F.2    Soria, J.M.3    Buil, A.4    Almasy, L.5    Ordonez-Llanos, J.J.6
  • 54
    • 0036829872 scopus 로고    scopus 로고
    • An unexpected requirement for phosphatidylethanolamine n-methyltransferase in the secretion of very low density lipoproteins
    • Noga A.A., Zhao Y., and Vance D.E. An unexpected requirement for phosphatidylethanolamine n-methyltransferase in the secretion of very low density lipoproteins. J Biol Chem 277 (2002) 42358-42365
    • (2002) J Biol Chem , vol.277 , pp. 42358-42365
    • Noga, A.A.1    Zhao, Y.2    Vance, D.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.