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Volumn 63, Issue 4, 2006, Pages 996-1004

Functional grouping based on signatures in protein termini

Author keywords

Bioinformatics; Function classification; Protein signature; Sequence similarity

Indexed keywords

AMINO ACID; FUNCTIONAL GROUP; PROTEIN; PROTEOME;

EID: 33646822043     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.20903     Document Type: Article
Times cited : (5)

References (27)
  • 1
    • 0036498862 scopus 로고    scopus 로고
    • Functional diversity of protein C-termini: More than zipcoding?
    • Chung JJ, Shikano S, Hanyu Y, Li M. Functional diversity of protein C-termini: more than zipcoding? Trends Cell Biol 2002;12:146-150.
    • (2002) Trends Cell Biol , vol.12 , pp. 146-150
    • Chung, J.J.1    Shikano, S.2    Hanyu, Y.3    Li, M.4
  • 2
    • 0029861143 scopus 로고    scopus 로고
    • The N-end rule: Functions, mysteries, uses
    • Varshavsky A. The N-end rule: functions, mysteries, uses. Proc Natl Acad Sci USA 1996;93:12142-12149.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 12142-12149
    • Varshavsky, A.1
  • 4
    • 0034916230 scopus 로고    scopus 로고
    • PDZ domains and the organization of supramolecular complexes
    • Sheng M, Sala C. PDZ domains and the organization of supramolecular complexes. Annu Rev Neurosci 2001;24:1-29.
    • (2001) Annu Rev Neurosci , vol.24 , pp. 1-29
    • Sheng, M.1    Sala, C.2
  • 7
    • 0025225456 scopus 로고
    • The retention signal for soluble proteins of the endoplasmic reticulum
    • Pelham HR. The retention signal for soluble proteins of the endoplasmic reticulum. Trends Biochem Sci 1990;15:483-486.
    • (1990) Trends Biochem Sci , vol.15 , pp. 483-486
    • Pelham, H.R.1
  • 8
    • 0030450784 scopus 로고    scopus 로고
    • The dynamic organisation of the secretory pathway
    • Pelham HR. The dynamic organisation of the secretory pathway. Cell Struct Funct 1996;21:413-419.
    • (1996) Cell Struct Funct , vol.21 , pp. 413-419
    • Pelham, H.R.1
  • 11
    • 23144466616 scopus 로고    scopus 로고
    • ProTeus: Identifying signatures in protein termini
    • Bahir I, Linial M. ProTeus: identifying signatures in protein termini. Nucleic Acids Res 2005;33(Web Server issue):W277-W280.
    • (2005) Nucleic Acids Res , vol.33
    • Bahir, I.1    Linial, M.2
  • 12
    • 0028062818 scopus 로고
    • The tail of a chaperonin: The C-terminal region of Escherichia coli GroEL protein
    • McLennan NF, McAteer S, Masters M. The tail of a chaperonin: the C-terminal region of Escherichia coli GroEL protein. Mol Microbiol 1994;14:309-321.
    • (1994) Mol Microbiol , vol.14 , pp. 309-321
    • McLennan, N.F.1    McAteer, S.2    Masters, M.3
  • 14
    • 0037398321 scopus 로고    scopus 로고
    • Nonrandom tripeptide sequence distributions at protein carboxyl termini
    • Gatto GJ Jr, Berg JM. Nonrandom tripeptide sequence distributions at protein carboxyl termini. Genome Res 2003;13:617-623.
    • (2003) Genome Res , vol.13 , pp. 617-623
    • Gatto Jr., G.J.1    Berg, J.M.2
  • 15
    • 0028694698 scopus 로고
    • Properties and biogenesis of peroxisomes
    • Chandoga J. Properties and biogenesis of peroxisomes. Bratisl Lek Listy 1994;95:543-557.
    • (1994) Bratisl Lek Listy , vol.95 , pp. 543-557
    • Chandoga, J.1
  • 16
    • 0033664345 scopus 로고    scopus 로고
    • Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5
    • Gatto GJ Jr, Geisbrecht BV, Gould SJ, Berg JM. Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5. Nat Struct Biol 2000;7:1091-1095.
    • (2000) Nat Struct Biol , vol.7 , pp. 1091-1095
    • Gatto Jr., G.J.1    Geisbrecht, B.V.2    Gould, S.J.3    Berg, J.M.4
  • 17
    • 0022904118 scopus 로고
    • The genes for human gastrin and cholecystokinin are located on different chromosomes
    • Lund T, Geurts van Kessel AH, Haun S, Dixon JE. The genes for human gastrin and cholecystokinin are located on different chromosomes. Hum Genet 1986;73:77-80.
    • (1986) Hum Genet , vol.73 , pp. 77-80
    • Lund, T.1    Geurts Van Kessel, A.H.2    Haun, S.3    Dixon, J.E.4
  • 18
    • 0036713679 scopus 로고    scopus 로고
    • Lysosomal degradation of cholecystokinin-(29-33)-amide in mouse brain is dependent on tripeptidyl peptidase-I: Implications for the degradation and storage of peptides in classical late-infantile neuronal ceroid lipofuscinosis
    • Bernardini F, Warburton MJ. Lysosomal degradation of cholecystokinin-(29- 33)-amide in mouse brain is dependent on tripeptidyl peptidase-I: implications for the degradation and storage of peptides in classical late-infantile neuronal ceroid lipofuscinosis. Biochem J 2002;366(Pt 2):521-529.
    • (2002) Biochem J , vol.366 , Issue.PART 2 , pp. 521-529
    • Bernardini, F.1    Warburton, M.J.2
  • 19
    • 17244368913 scopus 로고    scopus 로고
    • Genomic characterization reveals a simple histone H4 acetylation code
    • Dion MF, Altschuler SJ, Wu LF, Rando OJ. Genomic characterization reveals a simple histone H4 acetylation code. Proc Natl Acad Sci USA 2005;102:5501-5506.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 5501-5506
    • Dion, M.F.1    Altschuler, S.J.2    Wu, L.F.3    Rando, O.J.4
  • 20
    • 0032776495 scopus 로고    scopus 로고
    • Blocks+: A non-redundant database of protein alignment blocks derived from multiple compilations
    • Henikoff S, Henikoff JG, Pietrokovski S. Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations. Bioinformatics 1999;15:471-479.
    • (1999) Bioinformatics , vol.15 , pp. 471-479
    • Henikoff, S.1    Henikoff, J.G.2    Pietrokovski, S.3
  • 22
    • 27144474397 scopus 로고    scopus 로고
    • Genome-wide analyses of carboxyl-terminal sequences
    • Chung JJ, Yang H, Li M. Genome-wide analyses of carboxyl-terminal sequences. Mol Cell Proteomics 2003;2:173-181.
    • (2003) Mol Cell Proteomics , vol.2 , pp. 173-181
    • Chung, J.J.1    Yang, H.2    Li, M.3
  • 24
    • 0035834678 scopus 로고    scopus 로고
    • Distinct binding specificity of the multiple PDZ domains of INADL, a human protein with homology to INAD from Drosophila melanogaster
    • Vaccaro P, Brannetti B, Montecchi-Palazzi L, Philipp S, Helmer Citterich M, Cesareni G, Dente L. Distinct binding specificity of the multiple PDZ domains of INADL, a human protein with homology to INAD from Drosophila melanogaster. J Biol Chem 2001;276:42122-42130.
    • (2001) J Biol Chem , vol.276 , pp. 42122-42130
    • Vaccaro, P.1    Brannetti, B.2    Montecchi-Palazzi, L.3    Philipp, S.4    Helmer Citterich, M.5    Cesareni, G.6    Dente, L.7
  • 26
    • 13244269904 scopus 로고    scopus 로고
    • A functional hierarchical organization of the protein sequence space
    • Kaplan N, Friedlich M, Fromer M, Linial M. A functional hierarchical organization of the protein sequence space. BMC Bioinformatics 2004;5:196.
    • (2004) BMC Bioinformatics , vol.5 , pp. 196
    • Kaplan, N.1    Friedlich, M.2    Fromer, M.3    Linial, M.4
  • 27
    • 6344243343 scopus 로고    scopus 로고
    • A robust method to detect structural and functional remote homologues
    • Shachar O, Linial M. A robust method to detect structural and functional remote homologues. Proteins 2004;57:531-538.
    • (2004) Proteins , vol.57 , pp. 531-538
    • Shachar, O.1    Linial, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.